Trimin1|353285|estExt_Genemark1.C_Ctg_1540014 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353285
Unique Name	Trimin1\|353285\|estExt_Genemark1.C_Ctg_1540014
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1013

Homology

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BLAST of jgi.p|Trimin1|353285 vs. uniprot
Match: A0A835ZCI3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI3_9STRA)

HSP 1 Score: 937 bits (2421), Expect = 0.000e+0
Identity = 1012/1012 (100.00%), Postives = 1012/1012 (100.00%), Query Frame = 0

Query:    1 MLLHPYINVIATRPGSVWTPAAPAPEPVQEEQEEVPQQDVQQDASYDDGSYGQPDQQQQYYDRQPSDLQYHQGSILADGAATCSITKDSSSLTAXXXXXXXXXXXXHHQGSILADGAGDHDAYAQQQQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGGEQLQYYGGEQMAVQQQXXXXQEGYYDEALDGQQXGYGQAYEXXXXXXXXXXXXXXXYGDEGPPGGMWSGVEQDEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEQASFDTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQWVPEPSDVAATHTYPAYEYPHGHAAGPHSVSSHAGXXXXXXXXXXXXXXXXXXXXANGSPRTSPQLAAQPGVSSSSAQHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKWSGGDSGRALARPMSARAQPAXXXXXXXXXXXXXXXXXXXXRMGRLWARAGGALAAGATAAPAPRQQRSDFNDIMLSTAFCSRSNTPQAAAXXXXXXXXXXXXXXXXANTMLXXAAAXXXXXXXXXXXXXXXXXXXXXXXDPWMTASPRKQAPTPLATNNRPFSAPTLLASNRAFSMAICAHCAPFFAESVMRLRREMEAIMADVTRAHARDEEQRKLLVEENGSLRRELGVQVAAVQALREHQLEHNSGVIGDGPHSDSSRLQLMHQLEIAVAGDGNNGDADTESKLQRLVRLLMEQSEELDAQTLEXXXXXXXXXXXXXXXXXXENETERLRARLEAAGLQVTPPEVDGENSGDSGDHLGGSGHSGQWEAQGDTEGRASYGMPPMAQQXXXXXXXXXXXXXXXXXXXXXXXQQSMPMRA 1012
            MLLHPYINVIATRPGSVWTPAAPAPEPVQEEQEEVPQQDVQQDASYDDGSYGQPDQQQQYYDRQPSDLQYHQGSILADGAATCSITKDSSSLTAXXXXXXXXXXXXHHQGSILADGAGDHDAYAQQQQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGGEQLQYYGGEQMAVQQQXXXXQEGYYDEALDGQQXGYGQAYEXXXXXXXXXXXXXXXYGDEGPPGGMWSGVEQDEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEQASFDTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQWVPEPSDVAATHTYPAYEYPHGHAAGPHSVSSHAGXXXXXXXXXXXXXXXXXXXXANGSPRTSPQLAAQPGVSSSSAQHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKWSGGDSGRALARPMSARAQPAXXXXXXXXXXXXXXXXXXXXRMGRLWARAGGALAAGATAAPAPRQQRSDFNDIMLSTAFCSRSNTPQAAAXXXXXXXXXXXXXXXXANTMLXXAAAXXXXXXXXXXXXXXXXXXXXXXXDPWMTASPRKQAPTPLATNNRPFSAPTLLASNRAFSMAICAHCAPFFAESVMRLRREMEAIMADVTRAHARDEEQRKLLVEENGSLRRELGVQVAAVQALREHQLEHNSGVIGDGPHSDSSRLQLMHQLEIAVAGDGNNGDADTESKLQRLVRLLMEQSEELDAQTLEXXXXXXXXXXXXXXXXXXENETERLRARLEAAGLQVTPPEVDGENSGDSGDHLGGSGHSGQWEAQGDTEGRASYGMPPMAQQXXXXXXXXXXXXXXXXXXXXXXXQQSMPMRA
Sbjct:    1 MLLHPYINVIATRPGSVWTPAAPAPEPVQEEQEEVPQQDVQQDASYDDGSYGQPDQQQQYYDRQPSDLQYHQGSILADGAATCSITKDSSSLTAXXXXXXXXXXXXHHQGSILADGAGDHDAYAQQQQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGGEQLQYYGGEQMAVQQQXXXXQEGYYDEALDGQQXGYGQAYEXXXXXXXXXXXXXXXYGDEGPPGGMWSGVEQDEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEQASFDTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQWVPEPSDVAATHTYPAYEYPHGHAAGPHSVSSHAGXXXXXXXXXXXXXXXXXXXXANGSPRTSPQLAAQPGVSSSSAQHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKWSGGDSGRALARPMSARAQPAXXXXXXXXXXXXXXXXXXXXRMGRLWARAGGALAAGATAAPAPRQQRSDFNDIMLSTAFCSRSNTPQAAAXXXXXXXXXXXXXXXXANTMLXXAAAXXXXXXXXXXXXXXXXXXXXXXXDPWMTASPRKQAPTPLATNNRPFSAPTLLASNRAFSMAICAHCAPFFAESVMRLRREMEAIMADVTRAHARDEEQRKLLVEENGSLRRELGVQVAAVQALREHQLEHNSGVIGDGPHSDSSRLQLMHQLEIAVAGDGNNGDADTESKLQRLVRLLMEQSEELDAQTLEXXXXXXXXXXXXXXXXXXENETERLRARLEAAGLQVTPPEVDGENSGDSGDHLGGSGHSGQWEAQGDTEGRASYGMPPMAQQXXXXXXXXXXXXXXXXXXXXXXXQQSMPMRA 1012

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353285 vs. uniprot

BLAST of jgi.p|Trimin1|353285 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZCI3_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 879..934
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..469
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 505..548
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 977..1012
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 508..544
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 907..1012
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 907..927
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 580..594
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 445..469
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 575..608

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_154	contig	Contig_154:120711..136792 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353285	mRNA_16319	Tribonema minus UTEX_B_3156	mRNA	Contig_154 120711..136792 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353285|estExt_Genemark1.C_Ctg_1540014 ID=Trimin1|353285|estExt_Genemark1.C_Ctg_1540014|Name=jgi.p|Trimin1|353285|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1013bp
MLLHPYINVIATRPGSVWTPAAPAPEPVQEEQEEVPQQDVQQDASYDDGS
YGQPDQQQQYYDRQPSDLQYHQGSILADGAATCSITKDSSSLTAQYYERQ
PSDLQYHHQGSILADGAGDHDAYAQQQQQLHDGYAGGQGGAYDAQGAGYG
YTDEVAGNGGGGEGEWAPQEGVGMYDDSQQGGYQGYYDEGQGGDQGGGEQ
LQYYGGEQMAVQQQQQEQQEGYYDEALDGQQGGYGQAYEQQLQQGQGGYG
EEASYGDEGPPGGMWSGVEQDEHHQQQQQPLYSDDVDQQQHLQYYDEDSA
QYPQHGGEQASFDTYHTAPPPPPQQQQHHHHSAQQHGAPPPQLQHEQDAP
YAAAAAAYHPHTAPPQQQPQQHAAAHPPRQQQRQAPPQQWVPEPSDVAAT
HTYPAYEYPHGHAAGPHSVSSHAGSHAGSTHGGSGRGGGSGGARANGSPR
TSPQLAAQPGVSSSSAQHMAGGGLTGGAAAAAAAAAAAGVGGRGGGSARA
AAAAAPHSNASSRRTSADYGVTGSSSSAQFHAQQQQQQRSGGGGGAQHSE
ALAAAAALAAAALAGPLRPPHVTAAPAAAAAAAQQQQQQPKWSGGDSGRA
LARPMSARAQPAAAAAGAIGGVAAGGGGEGGGRMGRLWARAGGALAAGAT
AAPAPRQQRSDFNDIMLSTAFCSRSNTPQAAAAAGGAGPTPRQHRSASAN
TMLSTAAAAAAAGGAGPTPRQHRSDSQDVMLDPWMTASPRKQAPTPLATN
NRPFSAPTLLASNRAFSMAICAHCAPFFAESVMRLRREMEAIMADVTRAH
ARDEEQRKLLVEENGSLRRELGVQVAAVQALREHQLEHNSGVIGDGPHSD
SSRLQLMHQLEIAVAGDGNNGDADTESKLQRLVRLLMEQSEELDAQTLEL
DRAHADVEELHQQLEEQENETERLRARLEAAGLQVTPPEVDGENSGDSGD
HLGGSGHSGQWEAQGDTEGRASYGMPPMAQQHQQQQQQQQQQQQQRYHHH
QQQHQQSMPMRA*