mRNA_16329 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|177582
Unique Name	mRNA_16329
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|177582 vs. uniprot
Match: A0A835ZAG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAG3_9STRA)

HSP 1 Score: 888 bits (2295), Expect = 0.000e+0
Identity = 467/467 (100.00%), Postives = 467/467 (100.00%), Query Frame = 1

Query:    1 MSSPINFFVVLTTVTEFFILAFPVNSHADCAVCQEKYAAVKGYGCVECSPGAVGTALAVLIAFVVAVALCLWVLLSTAFGTADGLDAAQTGVIAGSALKLAHIGLVVARHLRTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGDGDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHPVQQNSWFGIRRASERSGGIDAAPSS 1401
            MSSPINFFVVLTTVTEFFILAFPVNSHADCAVCQEKYAAVKGYGCVECSPGAVGTALAVLIAFVVAVALCLWVLLSTAFGTADGLDAAQTGVIAGSALKLAHIGLVVARHLRTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGDGDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHPVQQNSWFGIRRASERSGGIDAAPSS
Sbjct:    1 MSSPINFFVVLTTVTEFFILAFPVNSHADCAVCQEKYAAVKGYGCVECSPGAVGTALAVLIAFVVAVALCLWVLLSTAFGTADGLDAAQTGVIAGSALKLAHIGLVVARHLRTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGDGDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHPVQQNSWFGIRRASERSGGIDAAPSS 467

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BLAST of jgi.p|Trimin1|177582 vs. uniprot
Match: A0A835Z2L6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2L6_9STRA)

HSP 1 Score: 495 bits (1274), Expect = 5.290e-163
Identity = 260/424 (61.32%), Postives = 322/424 (75.94%), Query Frame = 1

Query:   88 CAVCQEKYAAVKGYGCVECSPGAVGTALAVLIAFVVAVALCLWVLLSTAFGTADGLDAAQTGVIAGSALKLAHIGLVVARHLRTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGDGDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHPVQQNSWFGIRR 1359
            CAVC + YAAV GY CVEC+ G VG  +  ++     VAL LWVL++ A G  +G DA  T   A   LKLA   L++ARHLRTPVIV+Q+LTQFVSITGV +P  YL+FL V+D+++LDLRWL S GC++ L+FYQRL L+TLVPLGIA ++LAPRAY  CR RS     G KL+R  E+DL++LLVFAFL++SGVSLT+FQTF C+ L YDGP   GT YL ADY+++C TP HTAY  YA +M+ VYP+GIPA+FA +IR G   + D  + + L +ATSFLRKPY+    YWECAECLRRL+L  LL+FIMPGTAGQTAVACVFA   G+VYES RPH ERG+E LYRLGYSII+A+MFTSLL+QVKYVD YSQ+ IG LL+ LNV+LL+ A  Q+ LV+R VK  A P++QNSW G+R+
Sbjct:  562 CAVCADGYAAVTGYKCVECTAGIVGAVVVGMVVLFAVVALGLWVLVAAASGLGEGADATSTFAAASGTLKLARACLIIARHLRTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRRCRPRSA----GAKLQRVCEQDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPD--GTWYLRADYTIQCRTPEHTAYVTYAAIMLLVYPLGIPAIFAWMIRLG---AADVRERSALASATSFLRKPYSPQTSYWECAECLRRLLLAGLLVFIMPGTAGQTAVACVFASLAGVVYESVRPHEERGEESLYRLGYSIIAASMFTSLLIQVKYVDEYSQNAIGNLLIALNVILLVAAFTQAFLVYRKVKTTAGPIRQNSWLGLRK 976

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BLAST of jgi.p|Trimin1|177582 vs. uniprot
Match: A0A835YQ60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ60_9STRA)

HSP 1 Score: 482 bits (1241), Expect = 4.390e-159
Identity = 258/426 (60.56%), Postives = 317/426 (74.41%), Query Frame = 1

Query:   88 CAVCQEKYAAVKGYGCVECSPGAVGTALAVLIAFVVAVALCLWVLLSTAFGTADGLDAAQTGVIAGSALKLAHIGLVVARHLRTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGDGDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHP--VQQNSWFGIRR 1359
            CAV  + YAAV GY CVEC+ G VG  +  ++     V L LWVL + A G  +G DA  T   A   LKLA   ++VARHLRTPVIV+Q+LTQFVSITGV +P  YL+FL V+D+++LDLRWL S  C++ L+FYQRL L+TLVPLGIA ++ APRAY WCR RS    VG KL+R  E+DL++LLVFAFL++SGVSLT+FQTF C+ L YDGP   GT YL ADY ++C TP H AY +YA VM+ VYP+GIPA FA +IR G   + D  + + LTAATSFLRKPY++ A YWECAECLRRL+L  LL+FIMPG AGQTA+ACVFA+F G+VYES RPH E G+E LYRLGY II+A+M TSLL+QVKYVD YSQ  IG LL+ LNV+LL+ A  Q+ LV+R VK  A P  ++QNSW G+RR
Sbjct:  472 CAVRADGYAAVTGYKCVECTSGIVGAVVVGMVVLFAVVGLGLWVLFAAASGLGEGADATSTFAAASGTLKLAQACVIVARHLRTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPECVLHLSFYQRLLLTTLVPLGIAGVIFAPRAYRWCRPRS----VGAKLQRVCEQDLHVLLVFAFLVYSGVSLTIFQTFACDNLEYDGPD--GTWYLRADYRIQCRTPEHAAYGIYAAVMLLVYPLGIPAAFAWMIRLG---AADVRERSALTAATSFLRKPYSSHASYWECAECLRRLLLAGLLVFIMPGEAGQTAMACVFAVFAGMVYESVRPHEETGEEWLYRLGYGIIAASMLTSLLIQVKYVDEYSQDAIGKLLIALNVILLVAAFTQAFLVYRKVKTTAGPWAIRQNSWLGLRR 888

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BLAST of jgi.p|Trimin1|177582 vs. uniprot
Match: A0A836CCX9_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX9_9STRA)

HSP 1 Score: 487 bits (1253), Expect = 1.360e-157
Identity = 258/443 (58.24%), Postives = 327/443 (73.81%), Query Frame = 1

Query:   88 CAVCQEKYAAVKGYGCVECSPGAVGTALA-VLIAFVVAVALCLWVLLSTAFGTADGLDAAQTGVIAGSALKLAHIGLVVARHLRTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGDGDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHPVQQNSWFGIRRAS----ERSGGIDAAPSS 1401
            CAVC + YAAV GY CV+C+   V T +  V++       LCLW L S A G  +  DAA T     ++LKLA  GL+++RHLRTP+IV+Q+LTQFVSITGV +P  YL+FL V+  ++LDLRWL S GC++ L+FYQRL +STLVPLGIA ++LAPR + WCR R    F   +L+   EKDL++LLVFAFLI+SGVSLTVFQTF C+ L YDGP   GT +L ADY+++C TP HTAY +YA +M+ VYP+GIPAMFA+ IR GV  S + D+P +L AATSFLRKPY+A A YWECAECLRRL+L  LL+FIMPGTAGQTAVACVFA+  G+VYES  PH+E G+E LYRLGY II+A+MFTSLL+Q KYVD YSQ  IG LL+ LNVLL++ A  Q+ LV+R V+    PV+Q+S FG+R+ S    +    ++ AP+S
Sbjct:  776 CAVCADGYAAVVGYKCVKCNSNVVATTIVGVIVXXXXXXXLCLWALFSAASGLGESADAADTIAATSTSLKLARAGLILSRHLRTPIIVMQILTQFVSITGVTLPLQYLDFLQVMTFMSLDLRWLTSPGCVLHLSFYQRLLMSTLVPLGIAGVILAPRTFRWCRPR----FTSARLQHVYEKDLHLLLVFAFLIYSGVSLTVFQTFACDLLKYDGPN--GTYFLRADYTIQCRTPEHTAYMIYAAIMLLVYPLGIPAMFALTIRLGVIHSRECDRPRVLAAATSFLRKPYSAHASYWECAECLRRLLLAGLLVFIMPGTAGQTAVACVFAVLAGMVYESVGPHQEAGEESLYRLGYGIIAASMFTSLLIQAKYVDEYSQDAIGKLLIALNVLLMVSAFVQAFLVYRKVRMTTGPVRQSSLFGLRKHSSARLQEINDVEPAPTS 1212

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BLAST of jgi.p|Trimin1|177582 vs. uniprot
Match: A0A836CA63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA63_9STRA)

HSP 1 Score: 479 bits (1232), Expect = 2.850e-156
Identity = 252/424 (59.43%), Postives = 316/424 (74.53%), Query Frame = 1

Query:   88 CAVCQEKYAAVKGYGCVECSPGAVGTALAVLIAFVVAVALCLWVLLSTAFGTADGLDAAQTGVIAGSALKLAHIGLVVARHLRTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGDGDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHPVQQNSWFGIRR 1359
            CAVC + YA V GY CV+C+ G     +  ++    AV L LW+L + A G  +G DA  T   A   LKLA   +++ARHLRTPVIV+Q+LTQFVSITGV +P  YL+FL V+D+++LDLRWL S GC++ L+FYQRL L+TLVPLGIA ++LAPRAY  CR RS     G KL+R  E+DL++LLVFAFL++SGVSLT+FQTF C+ L YDGP   GT YL ADY+++C TP HTAY  YAV+M+ VYP+GIPA+FA +IR G   + D  + + L +ATSFLRKPY+    YWECAECLRRL+L  LL+FIMPGTAGQTAVACVFA   G+VYES RPH E G+E LYRLGY II+A+MFTSLL+QVK VD YSQ+ IG LL+ LNV+LL+ A  Q+ LV+R VK  A P++QNSW G+R+
Sbjct:  605 CAVCADGYAVVTGYKCVKCTAGVASAVVVGMVVLFAAVGLGLWILFAAASGLGEGADATSTFAAASGTLKLARACVILARHLRTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRRCRPRSA----GAKLQRVCEQDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPD--GTWYLRADYTIQCRTPEHTAYVTYAVIMLLVYPLGIPAIFAWMIRLG---AADVRERSALASATSFLRKPYSPQTSYWECAECLRRLLLAGLLVFIMPGTAGQTAVACVFASLAGMVYESVRPHEEAGEECLYRLGYGIIAASMFTSLLIQVKNVDDYSQNAIGNLLIALNVILLVAAFTQAFLVYRKVKTTAGPIRQNSWLGLRK 1019

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BLAST of jgi.p|Trimin1|177582 vs. uniprot
Match: A0A836CAK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK9_9STRA)

HSP 1 Score: 466 bits (1200), Expect = 1.240e-152
Identity = 249/424 (58.73%), Postives = 311/424 (73.35%), Query Frame = 1

Query:   88 CAVCQEKYAAVKGYGCVECSPGAVGTALAVLIAFVVAVALCLWVLLSTAFGTADGLDAAQTGVIAGSALKLAHIGLVVARHLRTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGDGDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHPVQQNSWFGIRR 1359
            CAVC + +AAV GY CV+C+ G     +  ++   VAV L        A G  +G DA  T   A   LKLA   +++ARHLRTPVIV+Q+LTQFVSITGV +P  YL+FL V+D+++LDLRWL S GC++ L+FYQRL L+TLVPLGIA ++LAPRAY  CR RS     G KL+R  E+D+++LLVFAFL++SGVSLT+FQTF C+ L YDGP   GT YL ADY+++C TP HTAY  YA +M+ VYP+GIPA+F  +IR G   + D    + L +ATSFLRKPY+  A YWECAECLRRL+L  LL+FIMPGTAGQTAVACVFA   G+VYES RPH E G+E LYRLGY II+A+MFTSLL+QVKYVD YSQ+ IG LL+ LNV+LL+ A  Q+ LV R VK  A P++QNSW G+R+
Sbjct:  502 CAVCADGFAAVTGYKCVKCTAGVASAVVVGVVVLFVAVGLXXXXXFVAASGLGEGADATSTFAAASGTLKLARACVILARHLRTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRRCRPRSA----GAKLQRVCEQDMHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPD--GTWYLRADYTIQCRTPEHTAYLTYAAIMLLVYPLGIPALFVWLIRLG---AADVCDRSGLASATSFLRKPYSPQASYWECAECLRRLLLAGLLVFIMPGTAGQTAVACVFASLAGMVYESVRPHEEAGEEWLYRLGYGIIAASMFTSLLIQVKYVDDYSQNAIGNLLISLNVILLVAAFTQAFLVHRKVKMTAGPIRQNSWLGLRK 916

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BLAST of jgi.p|Trimin1|177582 vs. uniprot
Match: A0A836CE47_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE47_9STRA)

HSP 1 Score: 422 bits (1084), Expect = 6.560e-143
Identity = 221/357 (61.90%), Postives = 279/357 (78.15%), Query Frame = 1

Query:  334 RTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGDGDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHPVQQNSWFGIRRA-SERSGGIDAAPSS 1401
            RTPVIV+Q+LTQFVSITGV +P  YL+FL V+D+++LDLRWL S GC++ L+FYQRL L+TLVPLGIA ++LAPRAY  C+ RS     G KL+R  EKDL++LLVFAFL++SGVSLT+FQTF C+ L YDGP   GT YL ADY+++C TP HTAY  YA +M+ +YP+GIPA+FA +IR G   + D  + + L +ATSFLRKPY+  A YWECAECLRRL+L  LL+FIMPGTAGQTA+ACVFA+  G+VYES RPH E G+E LYRLGY II+A+MFTSLL+QVKYVD YSQ+ IG LL+ LNV+LL  A  Q+ LV+R V+  A P++QNS FG+RR  + R   ++ AP+S
Sbjct:    1 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSA----GAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPD--GTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLG---AADVRERSALASATSFLRKPYSPHACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLAAAFTQAFLVYRKVRTTAGPIRQNSCFGLRRHDTPRLQEVEPAPTS 348

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BLAST of jgi.p|Trimin1|177582 vs. uniprot
Match: A0A835ZGI9_9STRA (Beta_helix domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGI9_9STRA)

HSP 1 Score: 430 bits (1106), Expect = 4.340e-140
Identity = 232/426 (54.46%), Postives = 295/426 (69.25%), Query Frame = 1

Query:   88 CAVCQEKYAAVKGYGCVECSPGAVGTALAVLIAFVVAVALCLWVLLSTAFGTADGLDAAQTGVIAGSALKLAHIGLVVARHLRTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGDGDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHPVQQNSWFGIRRAS 1365
            CAVC + YA++ GY CVEC+P A  T   +L   +VA+   +W+LLS A G  DG+ +AQ    AG+ALK+  I L++ + LR P++VLQVLTQ+VSITG+ +P  YL FL  +D L+LDLRWL S GC V L+FY RL L+TL PL    L+  PR Y+W  +R GR+    KLR+ + KD+N+ LVF FLIFSGVSL VF+TF C     DG  +   SYL ADYSLECGT RHTA++VYA VMV VYP+GIP ++A ++R    T   G Q +    A SFL +PY   A YWECAEC RRL+L   L+FI+PGTAGQ+AVACVFA+FTG+VYE  RPH+E  D+ LY LGY II A+MFTSLLMQ  Y+D  S+  IG LL+ LNVLLL MAL Q  LV+R V+    P++QNS+FG+  A+
Sbjct:  373 CAVCSDGYASLPGYRCVECTPKATATTFTILAISIVAILCIVWMLLSAATGVGDGVGSAQAVGSAGAALKVTRIALLLMQRLRIPIVVLQVLTQYVSITGISLPLQYLRFLRAIDFLSLDLRWLTSPGCAVHLDFYGRLLLTTLAPLVATALIFLPRLYVWTMSRRGRTCP--KLRQLIAKDVNVFLVFTFLIFSGVSLRVFETFGC-----DGSLS--RSYLRADYSLECGTSRHTAFSVYAGVMVLVYPVGIPLLYAAVLRHSAVTHRAGGQASRYATAASFLWRPYRGRAYYWECAECFRRLILAGFLVFILPGTAGQSAVACVFAVFTGMVYEQIRPHQEPMDKWLYTLGYGIIFASMFTSLLMQANYIDGSSEQAIGRLLIALNVLLLAMALTQMALVYRSVRDADRPIRQNSFFGLSHAA 789

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BLAST of jgi.p|Trimin1|177582 vs. uniprot
Match: A0A835YI67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI67_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 3.540e-129
Identity = 216/430 (50.23%), Postives = 284/430 (66.05%), Query Frame = 1

Query:   88 CAVCQEKYAAVKGYGCVECSPGAVGTALAVLIAFVVAVALCLWVLLSTAFGTADGLDAAQTGVIAGSALKLAHIGLVVARHLRTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGDGD-QPAMLTAATSFLRKPYAAS--ARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHPVQQNSWFGIRRASE 1368
            CAVC + YAA+ GY CVEC+ GA   A  V+      V L  W L S   G  DG+  AQT  +  +ALK+A +GL++ R LR P+IVLQ+LTQF+SITG+ +P  YL+FL  +DVLTLD+RWL S GC + + FYQ+L +STL PL +  L+  PR  +    R  R+    KL+R   KD N  LVF FLIFSGVSLT+F+TF C+ L YDGP   GTSYL ADYS++C TP HTAY +YA +M+ VYP GIPAM+ +++R+     G+   + +    + SFL +PY     A YWE  EC+RRL+LT +L+FI  GTAGQ+A ACVFA  +G+VYE  RPH   GD  LY LGYSI+  +MFTSLL+QV + D  SQ V+G+LL+ LNV+LL +ALAQ  LV+  V A   P+++NS   +   S+
Sbjct:  331 CAVCSDGYAALPGYRCVECTGGATAAAYTVIAVVAAVVLLLAWALFSQVAGIEDGVSGAQTTGVTLTALKVARLGLLLVRRLRIPIIVLQLLTQFISITGLSLPPDYLKFLRAMDVLTLDMRWLTSPGCALTIGFYQKLLISTLAPLAVVALIFTPRLCVSAARRGRRACGSAKLQRVAAKDFNAFLVFTFLIFSGVSLTIFETFACDFLRYDGPD--GTSYLRADYSVQCFTPEHTAYRIYAAIMILVYPFGIPAMYCLVLRRCAVEKGERRAESSRFATSASFLWRPYNKDGLAFYWESIECVRRLLLTGVLVFIDAGTAGQSAFACVFAFLSGVVYEQVRPHESSGDRSLYTLGYSIVFISMFTSLLLQVTFKDEQSQQVVGILLIALNVILLALALAQVFLVYSSVAAADLPLRRNSTLPLSAISD 758

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BLAST of jgi.p|Trimin1|177582 vs. uniprot
Match: A0A836CIF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF1_9STRA)

HSP 1 Score: 383 bits (983), Expect = 2.500e-123
Identity = 222/415 (53.49%), Postives = 276/415 (66.51%), Query Frame = 1

Query:   88 CAVCQEKYAAVKGYGCVECSPGAVGTALAVLIAFVVAVALCLWVLLSTAFGTADGLDAAQTGVIAGSALKLAHIGLVVARHLRTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVII------RQGVRTSGDGDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKA 1314
            CAVC E YAA+ GY CV CS  A  TA  +L    + +A  +WVL+STA  + +G+D   T   A SAL+LAH   ++ R LRTP+IV Q+LTQ+VSITG+ +P  YL+FL  +D LT DLRWL S GC + +NFY+RL LST+VPL +  ++  PR  L  RTR+GR+F G +LR  VEKDLN LLVF FLIFSGVSLTV QTF C+    D P  G  SYL ADYS++C TP+HTAY VYA VMV VYP+GIPA+FA ++      R+    S   DQ    + + +FL  PY A A YWEC ECL RLML  +L+FI P TA   AVAC+FA    +VYE   PH+E  ++ LY LGYSI+  +MFTS LMQ K+V   S+ VIG LL+ LNVLLL MALAQ  L + G  A
Sbjct:  221 CAVCAEHYAALPGYQCVRCSETATATAYTMLALAAMVLATLVWVLISTAITSNNGVDGVATAGAAMSALQLAHFLHLLVRQLRTPIIVWQILTQYVSITGLALPLQYLDFLRGIDFLTFDLRWLTSPGCAMNVNFYERLLLSTVVPLIVCGIIFIPRGCLRYRTRAGRTFNGAQLRTLVEKDLNTLLVFTFLIFSGVSLTVLQTFSCD----DFPLIG-KSYLRADYSIQCNTPKHTAYQVYAGVMVLVYPLGIPALFAWVLIYSFGWRRDEARSAAADQ---FSRSATFLWAPYTAHAHYWECIECLHRLMLAGMLVFIPPDTAALGAVACLFAFVMAVVYEQVTPHQETREKRLYTLGYSIVFVSMFTSQLMQYKHVGDTSEQVIGGLLIALNVLLLTMALAQVALAYSGSDA 627

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|177582 vs. uniprot

BLAST of jgi.p|Trimin1|177582 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZAG3_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z2L6_9STRA	5.290e-163	61.32	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YQ60_9STRA	4.390e-159	60.56	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCX9_9STRA	1.360e-157	58.24	Uncharacterized protein n=3 Tax=Tribonema minus Ta...	[more]
A0A836CA63_9STRA	2.850e-156	59.43	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CAK9_9STRA	1.240e-152	58.73	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CE47_9STRA	6.560e-143	61.90	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835ZGI9_9STRA	4.340e-140	54.46	Beta_helix domain-containing protein n=1 Tax=Tribo...	[more]
A0A835YI67_9STRA	3.540e-129	50.23	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CIF1_9STRA	2.500e-123	53.49	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_154	contig	Contig_154:211769..213172 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|177582\|e_gw1.154.18.1
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2BFIX@1\|root,2S176@2759\|Eukaryota
Evalue	4.95e-51
Seed ortholog	2880.D8LRF9
Hectar predicted targeting category	signal anchor
TranscriptId	177904
Track	FilteredModels1
ProteinId	177582

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|177582	gene_16329	Tribonema minus UTEX_B_3156	gene	Contig_154 211769..213172 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16329_1	exon_16329_1	Tribonema minus UTEX_B_3156	exon	Contig_154 211769..213172 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16329	CDS_16329	Tribonema minus UTEX_B_3156	CDS	Contig_154 211769..213172 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|177582	Trimin1\|177582\|e_gw1.154.18.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_154 211769..213172 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_154:211769..213172+
coding sequence from alignment at Contig_154:211769..213172+

spliced messenger RNA

>mRNA_16329 ID=mRNA_16329|Name=jgi.p|Trimin1|177582|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1404bp|location=Sequence derived from alignment at Contig_154:211769..213172+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCTCACCGATCAATTTTTTTGTTGTGCTCACAACAGTTACTGAGTT
TTTCATCCTCGCATTTCCCGTGAATTCGCACGCAGACTGCGCCGTATGTC
AGGAGAAGTATGCCGCTGTCAAAGGGTACGGCTGCGTGGAGTGCAGTCCT
GGAGCAGTGGGGACCGCGCTCGCTGTCCTGATCGCTTTTGTCGTCGCTGT
GGCCTTGTGTCTATGGGTCCTGCTTTCGACGGCATTTGGTACGGCAGACG
GCTTGGACGCCGCACAGACCGGTGTGATTGCAGGCAGCGCATTAAAGCTG
GCCCACATTGGTCTGGTCGTTGCGAGACACTTGCGGACCCCCGTCATCGT
CCTGCAGGTGCTCACGCAATTCGTCAGCATCACTGGTGTCCCCGTGCCGT
CGGTGTACCTCGAGTTCCTGCATGTTGTGGACGTCTTGACTTTAGACCTG
CGGTGGCTACCATCGGCAGGGTGCCTGGTGCGTCTCAACTTCTATCAGCG
ACTGTGCCTCAGCACGCTCGTTCCTCTGGGGATCGCCGTTCTTCTCCTCG
CTCCTCGTGCGTACCTCTGGTGCAGAACACGCAGCGGACGTAGCTTTGTT
GGTGTGAAACTGCGGCGATTTGTTGAGAAGGACCTGAATATCCTGCTGGT
CTTTGCGTTCCTGATCTTTTCCGGCGTTTCGCTCACAGTATTCCAAACCT
TTGTCTGCGAGACCCTCAACTACGATGGCCCTCAGGCTGGTGGTACGAGT
TACCTTCTGGCCGATTATTCACTTGAGTGTGGCACTCCCAGGCACACGGC
GTATACAGTGTATGCCGTAGTCATGGTGGCAGTTTACCCAATCGGCATCC
CTGCAATGTTCGCGGTAATCATTCGGCAAGGGGTACGCACGAGCGGCGAC
GGCGACCAACCTGCGATGCTTACAGCTGCGACGTCGTTCTTGCGCAAACC
GTACGCCGCCTCTGCGCGCTACTGGGAATGCGCAGAGTGTCTGCGCCGGC
TTATGCTGACAACACTTCTCATGTTCATCATGCCTGGGACAGCGGGGCAG
ACAGCAGTGGCGTGTGTGTTCGCATTGTTCACCGGCATCGTGTACGAGTC
ATTTCGACCACACAGGGAGCGGGGAGATGAGATGCTTTATCGCCTCGGTT
ACAGCATCATATCAGCAACCATGTTCACATCGCTGCTGATGCAGGTCAAG
TACGTAGACGCCTACAGCCAGAGTGTGATCGGCGTTCTGCTGGTGGTGCT
GAATGTGCTGCTGTTGCTGATGGCCCTTGCTCAGTCGATCCTGGTTTTCA
GAGGTGTCAAAGCCTTGGCCCATCCAGTGCAGCAGAACTCTTGGTTTGGA
ATTCGTCGGGCCAGTGAGCGGAGCGGCGGCATTGATGCGGCCCCTTCCTC
CTGA

protein sequence of jgi.p|Trimin1|177582

>Trimin1|177582|e_gw1.154.18.1 ID=Trimin1|177582|e_gw1.154.18.1|Name=jgi.p|Trimin1|177582|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=468bp
MSSPINFFVVLTTVTEFFILAFPVNSHADCAVCQEKYAAVKGYGCVECSP
GAVGTALAVLIAFVVAVALCLWVLLSTAFGTADGLDAAQTGVIAGSALKL
AHIGLVVARHLRTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDL
RWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFV
GVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTS
YLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGD
GDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQ
TAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVK
YVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHPVQQNSWFG
IRRASERSGGIDAAPSS*

mRNA from alignment at Contig_154:211769..213172+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16329 ID=mRNA_16329|Name=jgi.p|Trimin1|177582|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1404bp|location=Sequence derived from alignment at Contig_154:211769..213172+ (Tribonema minus UTEX_B_3156 )
ATGTCCTCACCGATCAATTTTTTTGTTGTGCTCACAACAGTTACTGAGTT
TTTCATCCTCGCATTTCCCGTGAATTCGCACGCAGACTGCGCCGTATGTC
AGGAGAAGTATGCCGCTGTCAAAGGGTACGGCTGCGTGGAGTGCAGTCCT
GGAGCAGTGGGGACCGCGCTCGCTGTCCTGATCGCTTTTGTCGTCGCTGT
GGCCTTGTGTCTATGGGTCCTGCTTTCGACGGCATTTGGTACGGCAGACG
GCTTGGACGCCGCACAGACCGGTGTGATTGCAGGCAGCGCATTAAAGCTG
GCCCACATTGGTCTGGTCGTTGCGAGACACTTGCGGACCCCCGTCATCGT
CCTGCAGGTGCTCACGCAATTCGTCAGCATCACTGGTGTCCCCGTGCCGT
CGGTGTACCTCGAGTTCCTGCATGTTGTGGACGTCTTGACTTTAGACCTG
CGGTGGCTACCATCGGCAGGGTGCCTGGTGCGTCTCAACTTCTATCAGCG
ACTGTGCCTCAGCACGCTCGTTCCTCTGGGGATCGCCGTTCTTCTCCTCG
CTCCTCGTGCGTACCTCTGGTGCAGAACACGCAGCGGACGTAGCTTTGTT
GGTGTGAAACTGCGGCGATTTGTTGAGAAGGACCTGAATATCCTGCTGGT
CTTTGCGTTCCTGATCTTTTCCGGCGTTTCGCTCACAGTATTCCAAACCT
TTGTCTGCGAGACCCTCAACTACGATGGCCCTCAGGCTGGTGGTACGAGT
TACCTTCTGGCCGATTATTCACTTGAGTGTGGCACTCCCAGGCACACGGC
GTATACAGTGTATGCCGTAGTCATGGTGGCAGTTTACCCAATCGGCATCC
CTGCAATGTTCGCGGTAATCATTCGGCAAGGGGTACGCACGAGCGGCGAC
GGCGACCAACCTGCGATGCTTACAGCTGCGACGTCGTTCTTGCGCAAACC
GTACGCCGCCTCTGCGCGCTACTGGGAATGCGCAGAGTGTCTGCGCCGGC
TTATGCTGACAACACTTCTCATGTTCATCATGCCTGGGACAGCGGGGCAG
ACAGCAGTGGCGTGTGTGTTCGCATTGTTCACCGGCATCGTGTACGAGTC
ATTTCGACCACACAGGGAGCGGGGAGATGAGATGCTTTATCGCCTCGGTT
ACAGCATCATATCAGCAACCATGTTCACATCGCTGCTGATGCAGGTCAAG
TACGTAGACGCCTACAGCCAGAGTGTGATCGGCGTTCTGCTGGTGGTGCT
GAATGTGCTGCTGTTGCTGATGGCCCTTGCTCAGTCGATCCTGGTTTTCA
GAGGTGTCAAAGCCTTGGCCCATCCAGTGCAGCAGAACTCTTGGTTTGGA
ATTCGTCGGGCCAGTGAGCGGAGCGGCGGCATTGATGCGGCCCCTTCCTC
CTGA

Coding sequence (CDS) from alignment at Contig_154:211769..213172+

>mRNA_16329 ID=mRNA_16329|Name=jgi.p|Trimin1|177582|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1404bp|location=Sequence derived from alignment at Contig_154:211769..213172+ (Tribonema minus UTEX_B_3156 )
ATGTCCTCACCGATCAATTTTTTTGTTGTGCTCACAACAGTTACTGAGTT
TTTCATCCTCGCATTTCCCGTGAATTCGCACGCAGACTGCGCCGTATGTC
AGGAGAAGTATGCCGCTGTCAAAGGGTACGGCTGCGTGGAGTGCAGTCCT
GGAGCAGTGGGGACCGCGCTCGCTGTCCTGATCGCTTTTGTCGTCGCTGT
GGCCTTGTGTCTATGGGTCCTGCTTTCGACGGCATTTGGTACGGCAGACG
GCTTGGACGCCGCACAGACCGGTGTGATTGCAGGCAGCGCATTAAAGCTG
GCCCACATTGGTCTGGTCGTTGCGAGACACTTGCGGACCCCCGTCATCGT
CCTGCAGGTGCTCACGCAATTCGTCAGCATCACTGGTGTCCCCGTGCCGT
CGGTGTACCTCGAGTTCCTGCATGTTGTGGACGTCTTGACTTTAGACCTG
CGGTGGCTACCATCGGCAGGGTGCCTGGTGCGTCTCAACTTCTATCAGCG
ACTGTGCCTCAGCACGCTCGTTCCTCTGGGGATCGCCGTTCTTCTCCTCG
CTCCTCGTGCGTACCTCTGGTGCAGAACACGCAGCGGACGTAGCTTTGTT
GGTGTGAAACTGCGGCGATTTGTTGAGAAGGACCTGAATATCCTGCTGGT
CTTTGCGTTCCTGATCTTTTCCGGCGTTTCGCTCACAGTATTCCAAACCT
TTGTCTGCGAGACCCTCAACTACGATGGCCCTCAGGCTGGTGGTACGAGT
TACCTTCTGGCCGATTATTCACTTGAGTGTGGCACTCCCAGGCACACGGC
GTATACAGTGTATGCCGTAGTCATGGTGGCAGTTTACCCAATCGGCATCC
CTGCAATGTTCGCGGTAATCATTCGGCAAGGGGTACGCACGAGCGGCGAC
GGCGACCAACCTGCGATGCTTACAGCTGCGACGTCGTTCTTGCGCAAACC
GTACGCCGCCTCTGCGCGCTACTGGGAATGCGCAGAGTGTCTGCGCCGGC
TTATGCTGACAACACTTCTCATGTTCATCATGCCTGGGACAGCGGGGCAG
ACAGCAGTGGCGTGTGTGTTCGCATTGTTCACCGGCATCGTGTACGAGTC
ATTTCGACCACACAGGGAGCGGGGAGATGAGATGCTTTATCGCCTCGGTT
ACAGCATCATATCAGCAACCATGTTCACATCGCTGCTGATGCAGGTCAAG
TACGTAGACGCCTACAGCCAGAGTGTGATCGGCGTTCTGCTGGTGGTGCT
GAATGTGCTGCTGTTGCTGATGGCCCTTGCTCAGTCGATCCTGGTTTTCA
GAGGTGTCAAAGCCTTGGCCCATCCAGTGCAGCAGAACTCTTGGTTTGGA
ATTCGTCGGGCCAGTGAGCGGAGCGGCGGCATTGATGCGGCCCCTTCCTC
CTGA