Trimin1|353265|estExt_Genemark1.C_Ctg_1520047 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353265
Unique NameTrimin1|353265|estExt_Genemark1.C_Ctg_1520047
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length367
Homology
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A835ZB58_9STRA (Diphthine--ammonia ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB58_9STRA)

HSP 1 Score: 698 bits (1801), Expect = 2.420e-253
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0
Query:    1 MASPYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAEKYDVPTSIALAHAWIAAATRALWLCQALSGAAFFLVGGARAQRRRRCRRRSVHRFLGGADMQAADLAAGEYAPHSAAAAXXXXVALLLVALGAAALAAMRFVPRSAGAAVVARRFESKSESAARAAAEPNDHIAALSAANW 366
            MASPYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAEKYDVPTSIALAHAWIAAATRALWLCQALSGAAFFLVGGARAQRRRRCRRRSVHRFLGGADMQAADLAAGEYAPHSAAAAXXXXVALLLVALGAAALAAMRFVPRSAGAAVVARRFESKSESAARAAAEPNDHIAALSAANW
Sbjct:    1 MASPYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAEKYDVPTSIALAHAWIAAATRALWLCQALSGAAFFLVGGARAQRRRRCRRRSVHRFLGGADMQAADLAAGEYAPHSAAAAXXXXVALLLVALGAAALAAMRFVPRSAGAAVVARRFESKSESAARAAAEPNDHIAALSAANW 366          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A031GNP0_9BURK (Diphthami_syn_2 domain-containing protein n=54 Tax=Janthinobacterium TaxID=29580 RepID=A0A031GNP0_9BURK)

HSP 1 Score: 223 bits (568), Expect = 3.280e-68
Identity = 119/230 (51.74%), Postives = 146/230 (63.48%), Query Frame = 0
Query:    7 LHSWSGGKDSALSLHHAMTEGGAKDVTL-ITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAE--KYDVPTSI 233
            L SWSGGKDS L+L  A   G   DV L ITA+ EDG ++RSH +   L+  QA ++G +++ Y ASWASYEE+FI +L   +A G   A FGDIDL P+R WEEK                      VCAAAGL A LPLWG DRRA+  +F+A GF+A+V C+NG  L  +F GREFD  FL DLP GV  CGE GEFHTFVYDGP F APV +RR +  +YD P ++
Sbjct:    5 LISWSGGKDSCLALWRARNAG--MDVPLLITAMDEDGRKSRSHGVPPELLAAQAASLGARLQRYHASWASYEEQFIAMLRAAKAEGIDHALFGDIDLQPHRDWEEK----------------------VCAAAGLTAHLPLWGGDRRALVDEFLAAGFKAIVVCINGQHLPRAFCGREFDASFLADLPPGVDACGENGEFHTFVYDGPAFSAPVALRRTQVLQYDAPANL 210          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A7V7Z7D8_9BURK (Diphthine--ammonia ligase n=1 Tax=Janthinobacterium sp. FT58W TaxID=2654254 RepID=A0A7V7Z7D8_9BURK)

HSP 1 Score: 219 bits (557), Expect = 1.340e-66
Identity = 111/229 (48.47%), Postives = 143/229 (62.45%), Query Frame = 0
Query:    7 LHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAE--KYDVPTSI 233
            L SWSGGKDS L+L  A   G  +   L+TA+ EDG ++RSH +   L+  QA  +G +++ Y  SW +YEE+F+++L + + AG   A FGDIDL P+R WEEK                      VCAAAGL A LPLWG +RRA+  +F+A GF+A+V C+NG  L A F GR+FD  FL DLP GV  CGE GEFHTFVYDGP F APV +RR +  +YD P  +
Sbjct:    4 LISWSGGKDSCLALWRARAAG-MQVPLLVTAMDEDGRKSRSHGVPPELLETQAAMLGARLQRYHTSWGTYEEQFVRVLREAKDAGIDHALFGDIDLQPHRDWEEK----------------------VCAAAGLTAHLPLWGGERRALVDEFLAAGFKAIVVCINGQHLPADFCGRQFDSAFLADLPPGVDACGENGEFHTFVYDGPAFSAPVALRRTQLLRYDAPAEL 209          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A255HX44_9BURK (Adenosine nucleotide hydrolase n=1 Tax=Janthinobacterium sp. PC23-8 TaxID=2012679 RepID=A0A255HX44_9BURK)

HSP 1 Score: 215 bits (548), Expect = 3.130e-65
Identity = 111/229 (48.47%), Postives = 144/229 (62.88%), Query Frame = 0
Query:    7 LHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAE--KYDVPTSI 233
            L SWSGGKDS L+L  A   G +  + L+TA+ EDG ++RSH +   L+  QA ++G ++  Y+ASWASYE +FI +L   +A G   A FGDIDL P+R WEEK                      VCA+AGL A LPLWG +R A+ ++F+A GF+A+V C+NG+ L   F GREFD  FL DLP GV  CGE GEFHTFVYDGP F APV ++R +  +YD P  +
Sbjct:    5 LISWSGGKDSCLALWRARAAGMSVPL-LVTAMDEDGRKSRSHGVTPELLEAQAASLGARLRRYNASWASYEAQFITMLRAAKAEGIAHALFGDIDLQPHRDWEEK----------------------VCASAGLQAHLPLWGENRLALVEEFLAAGFKAIVVCINGTHLAPEFCGREFDAAFLADLPPGVDACGENGEFHTFVYDGPAFSAPVALQRTQVLRYDAPPDL 210          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A2U2HNW7_9BURK (Diphthine--ammonia ligase n=1 Tax=Massilia glaciei TaxID=1524097 RepID=A0A2U2HNW7_9BURK)

HSP 1 Score: 211 bits (538), Expect = 1.160e-63
Identity = 116/232 (50.00%), Postives = 140/232 (60.34%), Query Frame = 0
Query:    4 PYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRA--EKYDVPTSI 233
            P  L SWSGGKDS L+L  A   GG +   LITA+ E G+++RSH I   L+  QA A+G  + FY  SW SYEE+FI +L+  RA G   A FGDIDL  +R+WEEK                      VCAAAGL ARLPLW   RR +  +FIA GF+AVV CVNG+ L   + GREFD  FL +LP GV  CGE GEFHTFVYDGP FG P+   R   E+Y+ P  +
Sbjct:    6 PKALVSWSGGKDSCLALWRARA-GGTEIALLITAMDEAGQKSRSHGIPPALLAAQARAIGAPLTFYDTSWTSYEEKFIGVLAAARANGISEAIFGDIDLLAHREWEEK----------------------VCAAAGLEARLPLWLEPRRKLVDEFIAAGFKAVVVCVNGNYLGPEWCGREFDADFLAELPEGVDACGENGEFHTFVYDGPAFGHPIGFERVAVERYESPPQL 214          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: UPI00055CB6B4 (diphthine--ammonia ligase n=1 Tax=Noviherbaspirillum massiliense TaxID=1465823 RepID=UPI00055CB6B4)

HSP 1 Score: 209 bits (532), Expect = 9.260e-63
Identity = 115/234 (49.15%), Postives = 137/234 (58.55%), Query Frame = 0
Query:    2 ASPYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAEK--YDVPTSI 233
            A+P  L SWSGGKDS L++  A   G A    LITA+ E G  +RSH +   L+R QA A+G +++FY ASW +YEE FI  L   RA G   A FGDIDL P+R+WEEK                      VCAAA L A LPLW   R  + Q+F+A GF+AVV CVNG+ L   F GREFD  FL  LP GV  CGE GEFHTFVYDGP F  P+ +RR  K  Y  P  +
Sbjct:    5 AAPSALVSWSGGKDSCLAMWRARQAGVAVH-RLITAMDESGASSRSHGLAPELLRAQAGALGLELQFYQASWKTYEERFIGALRAARADGFTHAIFGDIDLLPHREWEEK----------------------VCAAASLEASLPLWNEPREKLVQEFLASGFKAVVACVNGNHLGEEFCGREFDDAFLASLPPGVDACGENGEFHTFVYDGPAFARPLALRRGAKLRYQAPPEL 215          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: UPI001EDA1784 (diphthine--ammonia ligase n=1 Tax=Massilia sp. TS11 TaxID=2908003 RepID=UPI001EDA1784)

HSP 1 Score: 207 bits (526), Expect = 5.710e-62
Identity = 113/226 (50.00%), Postives = 136/226 (60.18%), Query Frame = 0
Query:    7 LHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRA--EKYDVP 230
            L SWSGGKDS L+L  A  + G +   L+TA+ EDG+R+RSH +   L+  QA A+G  ++FY  SW +YE  FI +L   RA G   A FGDIDL P+R WEEK                      VCAAAGL A LPLWG  RR +   F+A GFRA+V CVNG+ L   + GR+FD RFL +LP GV  CGE GEFHTFV DGP F APV V+R   E Y  P
Sbjct:    4 LVSWSGGKDSCLALWRAR-QAGTELALLVTAMDEDGQRSRSHGVPPHLLEAQAAALGLPLQFYPTSWQTYEARFIALLQAARARGIDEAVFGDIDLQPHRDWEEK----------------------VCAAAGLRASLPLWGAARRDLVDAFLAAGFRAIVVCVNGNYLGPEWCGRDFDARFLAELPDGVDACGENGEFHTFVVDGPAFSAPVAVQRGAVETYVAP 206          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A418X4S2_9BURK (Diphthine--ammonia ligase n=1 Tax=Noviherbaspirillum cavernae TaxID=2320862 RepID=A0A418X4S2_9BURK)

HSP 1 Score: 203 bits (517), Expect = 1.870e-60
Identity = 113/239 (47.28%), Postives = 137/239 (57.32%), Query Frame = 0
Query:    3 SPYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAEK--YDVPTSIALAHAW 239
            SP  L SWSGGKDS L+L  A   G A    LITA+ E G  +RSH +   L+  QA A+G ++ FY  SW +YEE+FI IL   R  G   A FGDIDL P+R+WEEK                      VC  AG+   LPLW   RR +  +F++ GF+A+V CVNG+ L   F GREFD++FL DLP  V  CGE GEFHTFVYDGP F  PV  RR+EK  Y+ P     A  W
Sbjct:   10 SPQALVSWSGGKDSCLALWRARQSGMAIR-RLITAMDESGGSSRSHGVPPALISAQAAALGAEMRFYDTSWKTYEEKFIAILRAARDDGITHAIFGDIDLMPHREWEEK----------------------VCGEAGITPCLPLWDEPRRKLVDEFLSLGFKAIVVCVNGTYLGEEFCGREFDEQFLADLPPNVDACGENGEFHTFVYDGPAFAQPVAFRRSEKQRYEAPAKFGGATYW 225          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A5B8NE04_9BURK (Diphthine--ammonia ligase n=2 Tax=Noviherbaspirillum sp. UKPF54 TaxID=2601898 RepID=A0A5B8NE04_9BURK)

HSP 1 Score: 203 bits (516), Expect = 1.990e-60
Identity = 109/225 (48.44%), Postives = 135/225 (60.00%), Query Frame = 0
Query:    4 PYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAEKYD 228
            P  L SWSGGKDS L++  A  + G     LITA+ E G  +RSH +   L++ QADA+G ++ FY+ SW++YEE+FI  L   R  G   A FGDIDL P+R+WEEK                      VCA AG+   LPLW   RRA+  +F++ GF+AVV CVNG+ L   F GREFD+ FL DLP  V  CGE GEFHTFVYDGP F  PV  RR EK+ 
Sbjct:    2 PDALVSWSGGKDSCLAMWRAR-QSGMTIRRLITAMDEAGGDSRSHGVPPQLLQAQADAIGAEMRFYATSWSNYEEKFIATLGDARHDGITQAVFGDIDLVPHREWEEK----------------------VCARAGITPILPLWDEPRRALVDEFLSLGFKAVVVCVNGNYLGEEFVGREFDEDFLADLPAHVDACGENGEFHTFVYDGPAFAHPVSFRRLEKWS 203          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: G0AEC1_COLFT (Diphthami_syn_2 domain-containing protein n=2 Tax=Collimonas fungivorans TaxID=158899 RepID=G0AEC1_COLFT)

HSP 1 Score: 201 bits (511), Expect = 1.270e-59
Identity = 109/217 (50.23%), Postives = 129/217 (59.45%), Query Frame = 0
Query:    7 LHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRR 223
            L SWSGGKDS L+L  A  + G +   L+TA+ E+G+R RSH +   L++ QADA+G  + FYSASW  YEE+FI  L     AG   A FGDIDL  +R WEEK                      VCA AGL A LPLW + RR +  +F+A GF+A+V CVNG  L   F GREFD  FL DLP  V  CGE GEFHTFVYDGP F  PV  RR
Sbjct:    9 LVSWSGGKDSCLALWRAR-QSGVRIERLVTALDENGQRARSHGVPPALLQAQADALGLPLVFYSASWQQYEEKFIAALRDAHGAGMRHAVFGDIDLQAHRDWEEK----------------------VCAQAGLQASLPLWNQPRRRLVDEFLALGFKALVVCVNGRHLPQDFCGREFDTAFLADLPPEVDACGENGEFHTFVYDGPAFAHPVPFRR 202          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZB58_9STRA2.420e-253100.00Diphthine--ammonia ligase n=1 Tax=Tribonema minus ... [more]
A0A031GNP0_9BURK3.280e-6851.74Diphthami_syn_2 domain-containing protein n=54 Tax... [more]
A0A7V7Z7D8_9BURK1.340e-6648.47Diphthine--ammonia ligase n=1 Tax=Janthinobacteriu... [more]
A0A255HX44_9BURK3.130e-6548.47Adenosine nucleotide hydrolase n=1 Tax=Janthinobac... [more]
A0A2U2HNW7_9BURK1.160e-6350.00Diphthine--ammonia ligase n=1 Tax=Massilia glaciei... [more]
UPI00055CB6B49.260e-6349.15diphthine--ammonia ligase n=1 Tax=Noviherbaspirill... [more]
UPI001EDA17845.710e-6250.00diphthine--ammonia ligase n=1 Tax=Massilia sp. TS1... [more]
A0A418X4S2_9BURK1.870e-6047.28Diphthine--ammonia ligase n=1 Tax=Noviherbaspirill... [more]
A0A5B8NE04_9BURK1.990e-6048.44Diphthine--ammonia ligase n=2 Tax=Noviherbaspirill... [more]
G0AEC1_COLFT1.270e-5950.23Diphthami_syn_2 domain-containing protein n=2 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1490.10coord: 150..239
e-value: 1.9E-18
score: 68.2
NoneNo IPR availableSUPERFAMILY52402Adenine nucleotide alpha hydrolases-likecoord: 7..228
IPR002761Diphthamide synthase domainPFAMPF01902Diphthami_syn_2coord: 10..111
e-value: 1.0E-10
score: 41.5
coord: 124..228
e-value: 1.9E-19
score: 70.1
IPR002761Diphthamide synthase domainCDDcd01994Alpha_ANH_like_IVcoord: 9..215
e-value: 6.65024E-49
score: 161.621
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 5..148
e-value: 9.7E-16
score: 60.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_152contigContig_152:277678..281400 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353265mRNA_15031Tribonema minus UTEX_B_3156 mRNAContig_152 277678..281471 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353265|estExt_Genemark1.C_Ctg_1520047 ID=Trimin1|353265|estExt_Genemark1.C_Ctg_1520047|Name=jgi.p|Trimin1|353265|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=367bp
MASPYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAI
CLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDI
DLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRD
RRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCG
EGGEFHTFVYDGPNFGAPVRVRRAEKYDVPTSIALAHAWIAAATRALWLC
QALSGAAFFLVGGARAQRRRRCRRRSVHRFLGGADMQAADLAAGEYAPHS
AAAALAAAVALLLVALGAAALAAMRFVPRSAGAAVVARRFESKSESAARA
AAEPNDHIAALSAANW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002761Diphthami_syn_dom
IPR014729Rossmann-like_a/b/a_fold