mRNA_15031 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353265
Unique NamemRNA_15031
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A835ZB58_9STRA (Diphthine--ammonia ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB58_9STRA)

HSP 1 Score: 697 bits (1799), Expect = 1.230e-252
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 3
Query:   72 MASPYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAEKYDVPTSIALAHAWIAAATRALWLCQALSGAAFFLVGGARAQRRRRCRRRSVHRFLGGADMQAADLAAGEYAPHSAAAAXXXXVALLLVALGAAALAAMRFVPRSAGAAVVARRFESKSESAARAAAEPNDHIAALSAANW 1169
            MASPYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAEKYDVPTSIALAHAWIAAATRALWLCQALSGAAFFLVGGARAQRRRRCRRRSVHRFLGGADMQAADLAAGEYAPHSAAAAXXXXVALLLVALGAAALAAMRFVPRSAGAAVVARRFESKSESAARAAAEPNDHIAALSAANW
Sbjct:    1 MASPYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAEKYDVPTSIALAHAWIAAATRALWLCQALSGAAFFLVGGARAQRRRRCRRRSVHRFLGGADMQAADLAAGEYAPHSAAAAXXXXVALLLVALGAAALAAMRFVPRSAGAAVVARRFESKSESAARAAAEPNDHIAALSAANW 366          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A031GNP0_9BURK (Diphthami_syn_2 domain-containing protein n=54 Tax=Janthinobacterium TaxID=29580 RepID=A0A031GNP0_9BURK)

HSP 1 Score: 222 bits (566), Expect = 1.320e-67
Identity = 119/230 (51.74%), Postives = 146/230 (63.48%), Query Frame = 3
Query:   90 LHSWSGGKDSALSLHHAMTEGGAKDVTL-ITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAE--KYDVPTSI 770
            L SWSGGKDS L+L  A   G   DV L ITA+ EDG ++RSH +   L+  QA ++G +++ Y ASWASYEE+FI +L   +A G   A FGDIDL P+R WEEK                      VCAAAGL A LPLWG DRRA+  +F+A GF+A+V C+NG  L  +F GREFD  FL DLP GV  CGE GEFHTFVYDGP F APV +RR +  +YD P ++
Sbjct:    5 LISWSGGKDSCLALWRARNAG--MDVPLLITAMDEDGRKSRSHGVPPELLAAQAASLGARLQRYHASWASYEEQFIAMLRAAKAEGIDHALFGDIDLQPHRDWEEK----------------------VCAAAGLTAHLPLWGGDRRALVDEFLAAGFKAIVVCINGQHLPRAFCGREFDASFLADLPPGVDACGENGEFHTFVYDGPAFSAPVALRRTQVLQYDAPANL 210          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A7V7Z7D8_9BURK (Diphthine--ammonia ligase n=1 Tax=Janthinobacterium sp. FT58W TaxID=2654254 RepID=A0A7V7Z7D8_9BURK)

HSP 1 Score: 218 bits (555), Expect = 5.350e-66
Identity = 111/229 (48.47%), Postives = 143/229 (62.45%), Query Frame = 3
Query:   90 LHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAE--KYDVPTSI 770
            L SWSGGKDS L+L  A   G  +   L+TA+ EDG ++RSH +   L+  QA  +G +++ Y  SW +YEE+F+++L + + AG   A FGDIDL P+R WEEK                      VCAAAGL A LPLWG +RRA+  +F+A GF+A+V C+NG  L A F GR+FD  FL DLP GV  CGE GEFHTFVYDGP F APV +RR +  +YD P  +
Sbjct:    4 LISWSGGKDSCLALWRARAAG-MQVPLLVTAMDEDGRKSRSHGVPPELLETQAAMLGARLQRYHTSWGTYEEQFVRVLREAKDAGIDHALFGDIDLQPHRDWEEK----------------------VCAAAGLTAHLPLWGGERRALVDEFLAAGFKAIVVCINGQHLPADFCGRQFDSAFLADLPPGVDACGENGEFHTFVYDGPAFSAPVALRRTQLLRYDAPAEL 209          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A255HX44_9BURK (Adenosine nucleotide hydrolase n=1 Tax=Janthinobacterium sp. PC23-8 TaxID=2012679 RepID=A0A255HX44_9BURK)

HSP 1 Score: 214 bits (546), Expect = 1.240e-64
Identity = 111/229 (48.47%), Postives = 144/229 (62.88%), Query Frame = 3
Query:   90 LHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAE--KYDVPTSI 770
            L SWSGGKDS L+L  A   G +  + L+TA+ EDG ++RSH +   L+  QA ++G ++  Y+ASWASYE +FI +L   +A G   A FGDIDL P+R WEEK                      VCA+AGL A LPLWG +R A+ ++F+A GF+A+V C+NG+ L   F GREFD  FL DLP GV  CGE GEFHTFVYDGP F APV ++R +  +YD P  +
Sbjct:    5 LISWSGGKDSCLALWRARAAGMSVPL-LVTAMDEDGRKSRSHGVTPELLEAQAASLGARLRRYNASWASYEAQFITMLRAAKAEGIAHALFGDIDLQPHRDWEEK----------------------VCASAGLQAHLPLWGENRLALVEEFLAAGFKAIVVCINGTHLAPEFCGREFDAAFLADLPPGVDACGENGEFHTFVYDGPAFSAPVALQRTQVLRYDAPPDL 210          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A2U2HNW7_9BURK (Diphthine--ammonia ligase n=1 Tax=Massilia glaciei TaxID=1524097 RepID=A0A2U2HNW7_9BURK)

HSP 1 Score: 211 bits (536), Expect = 4.580e-63
Identity = 116/232 (50.00%), Postives = 140/232 (60.34%), Query Frame = 3
Query:   81 PYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRA--EKYDVPTSI 770
            P  L SWSGGKDS L+L  A   GG +   LITA+ E G+++RSH I   L+  QA A+G  + FY  SW SYEE+FI +L+  RA G   A FGDIDL  +R+WEEK                      VCAAAGL ARLPLW   RR +  +FIA GF+AVV CVNG+ L   + GREFD  FL +LP GV  CGE GEFHTFVYDGP FG P+   R   E+Y+ P  +
Sbjct:    6 PKALVSWSGGKDSCLALWRARA-GGTEIALLITAMDEAGQKSRSHGIPPALLAAQARAIGAPLTFYDTSWTSYEEKFIGVLAAARANGISEAIFGDIDLLAHREWEEK----------------------VCAAAGLEARLPLWLEPRRKLVDEFIAAGFKAVVVCVNGNYLGPEWCGREFDADFLAELPEGVDACGENGEFHTFVYDGPAFGHPIGFERVAVERYESPPQL 214          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: UPI00055CB6B4 (diphthine--ammonia ligase n=1 Tax=Noviherbaspirillum massiliense TaxID=1465823 RepID=UPI00055CB6B4)

HSP 1 Score: 208 bits (530), Expect = 3.630e-62
Identity = 115/234 (49.15%), Postives = 137/234 (58.55%), Query Frame = 3
Query:   75 ASPYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAEK--YDVPTSI 770
            A+P  L SWSGGKDS L++  A   G A    LITA+ E G  +RSH +   L+R QA A+G +++FY ASW +YEE FI  L   RA G   A FGDIDL P+R+WEEK                      VCAAA L A LPLW   R  + Q+F+A GF+AVV CVNG+ L   F GREFD  FL  LP GV  CGE GEFHTFVYDGP F  P+ +RR  K  Y  P  +
Sbjct:    5 AAPSALVSWSGGKDSCLAMWRARQAGVAVH-RLITAMDESGASSRSHGLAPELLRAQAGALGLELQFYQASWKTYEERFIGALRAARADGFTHAIFGDIDLLPHREWEEK----------------------VCAAASLEASLPLWNEPREKLVQEFLASGFKAVVACVNGNHLGEEFCGREFDDAFLASLPPGVDACGENGEFHTFVYDGPAFARPLALRRGAKLRYQAPPEL 215          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: UPI001EDA1784 (diphthine--ammonia ligase n=1 Tax=Massilia sp. TS11 TaxID=2908003 RepID=UPI001EDA1784)

HSP 1 Score: 206 bits (524), Expect = 2.230e-61
Identity = 113/226 (50.00%), Postives = 136/226 (60.18%), Query Frame = 3
Query:   90 LHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRA--EKYDVP 761
            L SWSGGKDS L+L  A  + G +   L+TA+ EDG+R+RSH +   L+  QA A+G  ++FY  SW +YE  FI +L   RA G   A FGDIDL P+R WEEK                      VCAAAGL A LPLWG  RR +   F+A GFRA+V CVNG+ L   + GR+FD RFL +LP GV  CGE GEFHTFV DGP F APV V+R   E Y  P
Sbjct:    4 LVSWSGGKDSCLALWRAR-QAGTELALLVTAMDEDGQRSRSHGVPPHLLEAQAAALGLPLQFYPTSWQTYEARFIALLQAARARGIDEAVFGDIDLQPHRDWEEK----------------------VCAAAGLRASLPLWGAARRDLVDAFLAAGFRAIVVCVNGNYLGPEWCGRDFDARFLAELPDGVDACGENGEFHTFVVDGPAFSAPVAVQRGAVETYVAP 206          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A418X4S2_9BURK (Diphthine--ammonia ligase n=1 Tax=Noviherbaspirillum cavernae TaxID=2320862 RepID=A0A418X4S2_9BURK)

HSP 1 Score: 202 bits (515), Expect = 7.230e-60
Identity = 113/239 (47.28%), Postives = 137/239 (57.32%), Query Frame = 3
Query:   78 SPYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAEK--YDVPTSIALAHAW 788
            SP  L SWSGGKDS L+L  A   G A    LITA+ E G  +RSH +   L+  QA A+G ++ FY  SW +YEE+FI IL   R  G   A FGDIDL P+R+WEEK                      VC  AG+   LPLW   RR +  +F++ GF+A+V CVNG+ L   F GREFD++FL DLP  V  CGE GEFHTFVYDGP F  PV  RR+EK  Y+ P     A  W
Sbjct:   10 SPQALVSWSGGKDSCLALWRARQSGMAIR-RLITAMDESGGSSRSHGVPPALISAQAAALGAEMRFYDTSWKTYEEKFIAILRAARDDGITHAIFGDIDLMPHREWEEK----------------------VCGEAGITPCLPLWDEPRRKLVDEFLSLGFKAIVVCVNGTYLGEEFCGREFDEQFLADLPPNVDACGENGEFHTFVYDGPAFAQPVAFRRSEKQRYEAPAKFGGATYW 225          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: A0A5B8NE04_9BURK (Diphthine--ammonia ligase n=2 Tax=Noviherbaspirillum sp. UKPF54 TaxID=2601898 RepID=A0A5B8NE04_9BURK)

HSP 1 Score: 202 bits (514), Expect = 7.700e-60
Identity = 109/225 (48.44%), Postives = 135/225 (60.00%), Query Frame = 3
Query:   81 PYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRRAEKYD 755
            P  L SWSGGKDS L++  A  + G     LITA+ E G  +RSH +   L++ QADA+G ++ FY+ SW++YEE+FI  L   R  G   A FGDIDL P+R+WEEK                      VCA AG+   LPLW   RRA+  +F++ GF+AVV CVNG+ L   F GREFD+ FL DLP  V  CGE GEFHTFVYDGP F  PV  RR EK+ 
Sbjct:    2 PDALVSWSGGKDSCLAMWRAR-QSGMTIRRLITAMDEAGGDSRSHGVPPQLLQAQADAIGAEMRFYATSWSNYEEKFIATLGDARHDGITQAVFGDIDLVPHREWEEK----------------------VCARAGITPILPLWDEPRRALVDEFLSLGFKAVVVCVNGNYLGEEFVGREFDEDFLADLPAHVDACGENGEFHTFVYDGPAFAHPVSFRRLEKWS 203          
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Match: G0AEC1_COLFT (Diphthami_syn_2 domain-containing protein n=2 Tax=Collimonas fungivorans TaxID=158899 RepID=G0AEC1_COLFT)

HSP 1 Score: 200 bits (509), Expect = 4.880e-59
Identity = 109/217 (50.23%), Postives = 129/217 (59.45%), Query Frame = 3
Query:   90 LHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAICLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDIDLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRDRRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCGEGGEFHTFVYDGPNFGAPVRVRR 740
            L SWSGGKDS L+L  A  + G +   L+TA+ E+G+R RSH +   L++ QADA+G  + FYSASW  YEE+FI  L     AG   A FGDIDL  +R WEEK                      VCA AGL A LPLW + RR +  +F+A GF+A+V CVNG  L   F GREFD  FL DLP  V  CGE GEFHTFVYDGP F  PV  RR
Sbjct:    9 LVSWSGGKDSCLALWRAR-QSGVRIERLVTALDENGQRARSHGVPPALLQAQADALGLPLVFYSASWQQYEEKFIAALRDAHGAGMRHAVFGDIDLQAHRDWEEK----------------------VCAQAGLQASLPLWNQPRRRLVDEFLALGFKALVVCVNGRHLPQDFCGREFDTAFLADLPPEVDACGENGEFHTFVYDGPAFAHPVPFRR 202          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353265 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZB58_9STRA1.230e-252100.00Diphthine--ammonia ligase n=1 Tax=Tribonema minus ... [more]
A0A031GNP0_9BURK1.320e-6751.74Diphthami_syn_2 domain-containing protein n=54 Tax... [more]
A0A7V7Z7D8_9BURK5.350e-6648.47Diphthine--ammonia ligase n=1 Tax=Janthinobacteriu... [more]
A0A255HX44_9BURK1.240e-6448.47Adenosine nucleotide hydrolase n=1 Tax=Janthinobac... [more]
A0A2U2HNW7_9BURK4.580e-6350.00Diphthine--ammonia ligase n=1 Tax=Massilia glaciei... [more]
UPI00055CB6B43.630e-6249.15diphthine--ammonia ligase n=1 Tax=Noviherbaspirill... [more]
UPI001EDA17842.230e-6150.00diphthine--ammonia ligase n=1 Tax=Massilia sp. TS1... [more]
A0A418X4S2_9BURK7.230e-6047.28Diphthine--ammonia ligase n=1 Tax=Noviherbaspirill... [more]
A0A5B8NE04_9BURK7.700e-6048.44Diphthine--ammonia ligase n=2 Tax=Noviherbaspirill... [more]
G0AEC1_COLFT4.880e-5950.23Diphthami_syn_2 domain-containing protein n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_152contigContig_152:277678..281471 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353265|estExt_Genemark1.C_Ctg_1520047
DescriptionDiphthamide synthase
COG categoryS
Max annot lvl28216|Betaproteobacteria
EggNOG OGsCOG2102@1|root,COG2102@2|Bacteria,1RIT6@1224|Proteobacteria,2VRZC@28216|Betaproteobacteria,473R0@75682|Oxalobacteraceae
Evalue5.38e-69
Seed ortholog29581.BW37_02843
Hectar predicted targeting categoryother localisation
TranscriptId353587
TrackFilteredModels1
ProteinId353265
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353265gene_15031Tribonema minus UTEX_B_3156 geneContig_152 277678..281471 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353265Trimin1|353265|estExt_Genemark1.C_Ctg_1520047Tribonema minus UTEX_B_3156 polypeptideContig_152 277678..281400 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15031_7exon_15031_7Tribonema minus UTEX_B_3156 exonContig_152 277678..277722 -
exon_15031_6exon_15031_6Tribonema minus UTEX_B_3156 exonContig_152 277870..278073 -
exon_15031_5exon_15031_5Tribonema minus UTEX_B_3156 exonContig_152 278115..278262 -
exon_15031_4exon_15031_4Tribonema minus UTEX_B_3156 exonContig_152 278868..279172 -
exon_15031_3exon_15031_3Tribonema minus UTEX_B_3156 exonContig_152 279248..279313 -
exon_15031_2exon_15031_2Tribonema minus UTEX_B_3156 exonContig_152 280422..280580 -
exon_15031_1exon_15031_1Tribonema minus UTEX_B_3156 exonContig_152 281227..281471 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15031CDS_15031Tribonema minus UTEX_B_3156 CDSContig_152 281227..281400 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_15031UTR5_15031Tribonema minus UTEX_B_3156 five_prime_UTRContig_152 281401..281471 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15031 ID=mRNA_15031|Name=jgi.p|Trimin1|353265|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1172bp|location=Sequence derived from alignment at Contig_152:277678..281471- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCTTTTGCAGGCTTGCCGCCACATCAGGAAATGCTCATCGGTACGCTTA
TCGATTTGCGGCAGTGATACTATGGCTTCCCCTTACACTCTGCACTCCTG
GTCTGGGGGGAAGGATTCTGCACTGTCATTGCACCATGCCATGACGGAGG
GAGGAGCCAAAGATGTTACGCTTATCACTGCTATAAGCGAGGATGGAGAG
CGTACTAGGAGCCATGCAATCTGCCTGCCGCTCATGAGGCAGCAGGCTGA
CGCAGTGGGCTGCAAGATAGAGTTCTACTCGGCATCGTGGGCGAGCTACG
AGGAAGAGTTCATCAAGATACTCAGCAAGCACCGCGCGGCGGGGGCAATC
ACCGCGTACTTCGGCGACATAGATCTGGACCCCAACCGCAAGTGGGAAGA
AAAGCGGCAGCGCGCCGCAGCACAGGAGCGCCGCATCGGCAGCGCGCGCA
GTCACGGACGCCAGTCCGCGGTGTGCGCCGCCGCGGGCCTCGCGGCGCGG
CTGCCGCTGTGGGGGCGCGACCGCCGCGCCGTCGCGCAGGACTTCATCGC
GCGCGGCTTCCGCGCCGTCGTTTGCTGCGTGAACGGGTCGCGCCTCGACG
CGTCGTTCGCGGGGCGCGAGTTCGACCAGCGCTTCCTGGACGACCTGCCG
CGCGGCGTGTGCCCGTGCGGCGAGGGCGGCGAGTTCCACACGTTCGTGTA
CGACGGGCCCAACTTCGGCGCGCCGGTGCGCGTGCGGCGCGCGGAGAAGT
ACGACGTCCCGACCAGTATCGCGCTCGCGCACGCGTGGATCGCCGCCGCC
ACGCGCGCGCTGTGGCTGTGTCAGGCGCTCAGCGGCGCGGCCTTTTTCCT
CGTCGGCGGCGCGCGCGCGCAGCGCCGCCGCCGCTGCCGCCGCCGCAGCG
TCCACCGCTTCCTCGGCGGCGCTGACATGCAGGCCGCCGACCTGGCGGCG
GGGGAGTACGCGCCGCACTCCGCCGCGGCAGCGCTGGCTGCGGCGGTGGC
GCTGCTGCTGGTGGCGCTAGGCGCGGCCGCGCTTGCCGCCATGCGGTTCG
TGCCGCGCAGCGCCGGCGCCGCCGTTGTGGCGCGGCGCTTTGAGTCAAAG
TCAGAATCCGCCGCGCGTGCTGCTGCTGAGCCGAACGACCACATTGCTGC
TTTGTCGGCGGCAAATTGGTAA
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protein sequence of jgi.p|Trimin1|353265

>Trimin1|353265|estExt_Genemark1.C_Ctg_1520047 ID=Trimin1|353265|estExt_Genemark1.C_Ctg_1520047|Name=jgi.p|Trimin1|353265|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=367bp
MASPYTLHSWSGGKDSALSLHHAMTEGGAKDVTLITAISEDGERTRSHAI
CLPLMRQQADAVGCKIEFYSASWASYEEEFIKILSKHRAAGAITAYFGDI
DLDPNRKWEEKRQRAAAQERRIGSARSHGRQSAVCAAAGLAARLPLWGRD
RRAVAQDFIARGFRAVVCCVNGSRLDASFAGREFDQRFLDDLPRGVCPCG
EGGEFHTFVYDGPNFGAPVRVRRAEKYDVPTSIALAHAWIAAATRALWLC
QALSGAAFFLVGGARAQRRRRCRRRSVHRFLGGADMQAADLAAGEYAPHS
AAAALAAAVALLLVALGAAALAAMRFVPRSAGAAVVARRFESKSESAARA
AAEPNDHIAALSAANW*
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mRNA from alignment at Contig_152:277678..281471-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15031 ID=mRNA_15031|Name=jgi.p|Trimin1|353265|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3794bp|location=Sequence derived from alignment at Contig_152:277678..281471- (Tribonema minus UTEX_B_3156 )
GGCTTTTGCAGGCTTGCCGCCACATCAGGAAATGCTCATCGGTACGCTTA TCGATTTGCGGCAGTGATACTATGGCTTCCCCTTACACTCTGCACTCCTG GTCTGGGGGGAAGGATTCTGCACTGTCATTGCACCATGCCATGACGGAGG GAGGAGCCAAAGATGTTACGCTTATCACTGCTATAAGCGAGGATGGAGAG CGTACTAGGAGCCATGCAATCTGCCTGCCGCTCATGAGGCAGCAGGTGTG TCGTTTGCCCATAGTTTTGAAGTTGCTGTGATATTGATTGTCGCAACAGT GATCTGATACAGGCAAAGCAACGTCAGACTCTTAGGTGCTGTCACAAGCT GTTATGCAACGCTGATTGATCCCTGGTCATATGCCCTCATCTCACCAGCC ATGCGGCAGCAGGCATGCAGCATCGGCGCGTGCATGCAGAAGTCATCTCA CCTTTTAGAATGTTCAACAGCATCCACGTGCCACACGGTATAGTCGCTGA AAAACACATGTGCAATGCCACCTGTAGTGGTGCAGCCAGCGCAGCGCCAC TGTGCTGGACGCGACACATCTTGATCAGTTTTCCATCGTGCCCTGTATGA TGCACGTCCTAGAATTTACTGTACAATAGTAGGCTACCAGAGTTAATGTG CATTTTGTTCATTAGGTGTGCTACTAATAGACACCTAATAAAAAAAATGC ACTATTTGTAGCACACCTAACAAAACAAATGCACATGACTACTAGCACAC CTAATTTAAAAAATGCACATTAACTCTAGAAGGCGTAGTGCTCCGGACCA AGCTGCAGTCTTACATGCAAGACAGCATTCTGCTTGCATGCCTGCCAACT TTGCTAAACCTCCACACTGATTGCCTGGAACACGATGTCAGGCTGACGCA GTGGGCTGCAAGATAGAGTTCTACTCGGCATCGTGGGCGAGCTACGAGGA AGAGTTCATCAAGATACTCAGCAAGCACCGCGCGGCGGGGGCAATCACCG CGTACTTCGGCGACATAGATCTGGACCCCAACCGCAAGTGGGAAGAAAAG GTGATTGCATGTGTGCATGACGCACAGATCAGCACGCCATGGAGTGATTT GCTGCAGAGGGCTGTAAATCGTATTATTCATTTCTCGCTCAGGGCGCAAG AAGCCCAGAGTAGTGAATTCAAGCTTGCTACATGCCTCATGATGCAGTGT CTCAGTGCTCATTGACGATGACACGCGACTGTACGCCTGCGGATGCGCTG AGAGATTGCATCGAAGAGGGAGACACTGCCCTGCAGCACGCCTCTGCCTG CTTTCAACGACCACGCATGGCTGCCTCTATATGTTGAACGCACCCCACAA CCACTTGAACAGGGGAGTGACATGCTGAACACGTGCGAATGGCCACATGC ATATGCAAGACCCCGATGTGTCCTGTCCCGGTGACGCCTGAGCACGCTTG GACCGCCTGCTTGATCATGACCGCCATGTGTGCAACGCGCTGACACATTT GCCTCTGGTGCTGCGCCGCCACTCAAACCCCGCGCAATGTGACATATGAG TTGTACACGATTCTGGCAGCGAGTCGCGTGCTGCGTCGGCGGTGACACGC AGCCCGAGCCTCGCTCGTGTCTGCGGGCCATGCGCTCGAGTGTGCGCGCG CCATGCGCCACGAGGGTACGCACGGCCGGTATATTGACATCACGCGGCGC AGCGTGTATTTGCATCCAACGGCATACGACATTGGCGCTCCATTGCGGCG TATGCGATGCCGAGCACGGCGCTGTCCAACACATCTCGTTCTGGTGCATG TGCACGGTGCGCGTGCAGTTTGCATGAGTCAAAGTCCAAATCAGTAGCTG CGACGCCGCCGTGACAGCATTTTGCATGTGTCCTGGTACCCCATGGCTGA GTGCAGCGGCACATACTCACGTGCGAGTCGAAGTTGAAGTGGATGGCTGC TGCATGCGTCATCTACATGTGCAGAAACGACGCCCGCCACTGCCGCCCTT GGGGCGGCAGCCCGCAGAGCAGGCGCAAGACACGTTTGTCGTGGCGAGGC GCACAACCTCTTTCTGAGCGCTGCCACCCGTTGTCGCTCTCATCGCGTAT CGAGGACGCTCTGTGGCTGCCCTGCACAACAGCGCCTGACCTTCGGCGCA CCCCGCAGCGGCAGCGCGCCGCAGCACAGGAGCGCCGCATCGGCAGCGCG CGCAGTCACGGACGCCAGTCCGCGGTCGCACGCCCCGCGACTGAAAGCCA GCGCTTCACAACTCCGCTGCCGCCGCCGCGCCGCCGCCCGCCGCCGCAGG TGTGCGCCGCCGCGGGCCTCGCGGCGCGGCTGCCGCTGTGGGGGCGCGAC CGCCGCGCCGTCGCGCAGGACTTCATCGCGCGCGGCTTCCGCGCCGTCGT TTGCTGCGTGAACGGGTCGCGCCTCGACGCGTCGTTCGCGGGGCGCGAGT TCGACCAGCGCTTCCTGGACGACCTGCCGCGCGGCGTGTGCCCGTGCGGC GAGGGCGGCGAGTTCCACACGTTCGTGTACGACGGGCCCAACTTCGGCGC GCCGGTGCGCGTGCGGCGCGCGGAGAAGTACGACGTCCCGACCAGTATCG CGCTGTACCACTACCAGAAGCTGCTGCCGGCATGACGATCGCAGCGACAG TTTCGATGTGGCGGTTTGTGACGTGGCCGAGTACCGTTGCCAGAAGCTTT TGCCGGTGCGACGGTTGCAGCGGCAGTCTTGATGTGGCGGTTTGAGACAG GGGCCAGCCTGCATGCAGCAGCATGGCGGCGGCACAAAAGCTTAGGTCAC TGTGACGAGGCTTACTGAGGTGAATTTTCAATAAATTGGTATTATGGGTA ATTCACTGGTGCTGCGCTTCTTCACTTGCATCATCGAATTGCCCTTGTTT CACGGCATGGTGTTCTCTGGTCCTTCCTTACGCTTGGTTCCCTGCTGTTC CGCCCATGGCTGATGTGGTTGCATAGGAAGTGCGGCCTTGGGGTTCTTTG TGCAATGGGCCGTGACAACCATGAGGCGCATGACTGATTTCATGAAGCGG CCCTCGTGTTCGTCGTTGCGAAGAATCCTGCACTAGGCCACGTCACCCTG CACGCCCTCGCCGCCGCCTGCGCCGCCGCCGCGCTCGCCGCGATCATCTA CTTCAAGCGCGCTGCTGCCGCCGCCGACGCCGCCGCCCCATCGCGTTCAC TCTCTACAGCGCGCACGCGTGGATCGCCGCCGCCACGCGCGCGCTGTGGC TGTGTCAGGCGCTCAGCGGCGCGGCCTTTTTCCTCGTCGGCGGCGCGCGC GCGCAGCGCCGCCGCCGCTGCCGCCGCCGCAGCGTCCACCGCTTCCTCGG CGGCGCTGTGTTCGCGACCGCGCTCGCGGCATGCGCCACGGCCTGCAGGA CATGCAGGCCGCCGACCTGGCGGCGGGGGAGTACGCGCCGCACTCCGCCG CGGCAGCGCTGGCTGCGGCGGTGGCGCTGCTGCTGGTGGCGCTAGGCGCG GCCGCGCTTGCCGCCATGCGGTTCGTGCCGCGCAGCGCCGGCGCCGCCGT TGTGGCGCGGCGCTTTGAGTCAAAGTCAGAATCCGCCGCGCGTGCTGCTG CTGTGCGAGTGCACGCGACACTTGGCGTGCCACGTGCGTGCTGTGTGTGT ATGTGTGTCGGTGTATGCGTGTCTGGTAGTATTGCAGCTGGGCGCATGTA TGCAAGTGAGTTCATACTGCAGTGTTTGTGTGTGCGCGCTTTGTGGCAGG AGCCGAACGACCACATTGCTGCTTTGTCGGCGGCAAATTGGTAA
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Coding sequence (CDS) from alignment at Contig_152:277678..281471-

>mRNA_15031 ID=mRNA_15031|Name=jgi.p|Trimin1|353265|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1101bp|location=Sequence derived from alignment at Contig_152:277678..281471- (Tribonema minus UTEX_B_3156 )
ATGGCTTCCCCTTACACTCTGCACTCCTGGTCTGGGGGGAAGGATTCTGC
ACTGTCATTGCACCATGCCATGACGGAGGGAGGAGCCAAAGATGTTACGC
TTATCACTGCTATAAGCGAGGATGGAGAGCGTACTAGGAGCCATGCAATC
TGCCTGCCGCTCATGAGGCAGCAGGCTGACGCAGTGGGCTGCAAGATAGA
GTTCTACTCGGCATCGTGGGCGAGCTACGAGGAAGAGTTCATCAAGATAC
TCAGCAAGCACCGCGCGGCGGGGGCAATCACCGCGTACTTCGGCGACATA
GATCTGGACCCCAACCGCAAGTGGGAAGAAAAGCGGCAGCGCGCCGCAGC
ACAGGAGCGCCGCATCGGCAGCGCGCGCAGTCACGGACGCCAGTCCGCGG
TGTGCGCCGCCGCGGGCCTCGCGGCGCGGCTGCCGCTGTGGGGGCGCGAC
CGCCGCGCCGTCGCGCAGGACTTCATCGCGCGCGGCTTCCGCGCCGTCGT
TTGCTGCGTGAACGGGTCGCGCCTCGACGCGTCGTTCGCGGGGCGCGAGT
TCGACCAGCGCTTCCTGGACGACCTGCCGCGCGGCGTGTGCCCGTGCGGC
GAGGGCGGCGAGTTCCACACGTTCGTGTACGACGGGCCCAACTTCGGCGC
GCCGGTGCGCGTGCGGCGCGCGGAGAAGTACGACGTCCCGACCAGTATCG
CGCTCGCGCACGCGTGGATCGCCGCCGCCACGCGCGCGCTGTGGCTGTGT
CAGGCGCTCAGCGGCGCGGCCTTTTTCCTCGTCGGCGGCGCGCGCGCGCA
GCGCCGCCGCCGCTGCCGCCGCCGCAGCGTCCACCGCTTCCTCGGCGGCG
CTGACATGCAGGCCGCCGACCTGGCGGCGGGGGAGTACGCGCCGCACTCC
GCCGCGGCAGCGCTGGCTGCGGCGGTGGCGCTGCTGCTGGTGGCGCTAGG
CGCGGCCGCGCTTGCCGCCATGCGGTTCGTGCCGCGCAGCGCCGGCGCCG
CCGTTGTGGCGCGGCGCTTTGAGTCAAAGTCAGAATCCGCCGCGCGTGCT
GCTGCTGAGCCGAACGACCACATTGCTGCTTTGTCGGCGGCAAATTGGTA
A
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