Trimin1|353256|estExt_Genemark1.C_Ctg_1520033 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353256
Unique NameTrimin1|353256|estExt_Genemark1.C_Ctg_1520033
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length675
Homology
BLAST of jgi.p|Trimin1|353256 vs. uniprot
Match: A0A836CJI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJI8_9STRA)

HSP 1 Score: 776 bits (2003), Expect = 5.390e-274
Identity = 597/597 (100.00%), Postives = 597/597 (100.00%), Query Frame = 0
Query:   33 APRPGTAPXXXSRITQLARDRSAVYRQREAARAAQKQELELRECTFTPDTGASNGRRGGXXXXXXXXXXEAVPVHERLLRQQKDQEAHRALAAAQLEAAALAECSFRPRLVARPRAAAAAAAAPPLHERVWDVQWQREGRLRELAERAHAESAPTFAPAIXXXXXRLAXRARGDDXXXXXXXXXSPTRDRSSMSLSQNPGERLAREAAEXXXXXXXXXXXXXXXXAAENTFTPELSAGTQRLVRRRRELRAPFEERQAALEARSRQRGAARLRCEREREAAWFTPATAPRSDALVRRRMPERARETPEQRCTRMALVEVSAXXXXXXXXXXXXXXXXWGRRMGAEAERRXXXXXXRQAEAASQHAFTPDINPISRALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARPDMYGADNKYRLPVREPWRIAQGIRDKAEERAARLATAQAEREVAEMQACTFAPTLPTPPPPTSGPILVRGLGRHLELCDAARRAAAAADARAAAAFAVRPGAQRRGSDGLTLVQPFRLSGAEARVKWAAR 629
            APRPGTAPXXXSRITQLARDRSAVYRQREAARAAQKQELELRECTFTPDTGASNGRRGGXXXXXXXXXXEAVPVHERLLRQQKDQEAHRALAAAQLEAAALAECSFRPRLVARPRAAAAAAAAPPLHERVWDVQWQREGRLRELAERAHAESAPTFAPAIXXXXXRLAXRARGDDXXXXXXXXXSPTRDRSSMSLSQNPGERLAREAAEXXXXXXXXXXXXXXXXAAENTFTPELSAGTQRLVRRRRELRAPFEERQAALEARSRQRGAARLRCEREREAAWFTPATAPRSDALVRRRMPERARETPEQRCTRMALVEVSAXXXXXXXXXXXXXXXXWGRRMGAEAERRXXXXXXRQAEAASQHAFTPDINPISRALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARPDMYGADNKYRLPVREPWRIAQGIRDKAEERAARLATAQAEREVAEMQACTFAPTLPTPPPPTSGPILVRGLGRHLELCDAARRAAAAADARAAAAFAVRPGAQRRGSDGLTLVQPFRLSGAEARVKWAAR
Sbjct:   33 APRPGTAPXXXSRITQLARDRSAVYRQREAARAAQKQELELRECTFTPDTGASNGRRGGXXXXXXXXXXEAVPVHERLLRQQKDQEAHRALAAAQLEAAALAECSFRPRLVARPRAAAAAAAAPPLHERVWDVQWQREGRLRELAERAHAESAPTFAPAIXXXXXRLAXRARGDDXXXXXXXXXSPTRDRSSMSLSQNPGERLAREAAEXXXXXXXXXXXXXXXXAAENTFTPELSAGTQRLVRRRRELRAPFEERQAALEARSRQRGAARLRCEREREAAWFTPATAPRSDALVRRRMPERARETPEQRCTRMALVEVSAXXXXXXXXXXXXXXXXWGRRMGAEAERRXXXXXXRQAEAASQHAFTPDINPISRALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARPDMYGADNKYRLPVREPWRIAQGIRDKAEERAARLATAQAEREVAEMQACTFAPTLPTPPPPTSGPILVRGLGRHLELCDAARRAAAAADARAAAAFAVRPGAQRRGSDGLTLVQPFRLSGAEARVKWAAR 629          
BLAST of jgi.p|Trimin1|353256 vs. uniprot
Match: D7FJD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJD2_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 6.840e-49
Identity = 181/586 (30.89%), Postives = 247/586 (42.15%), Query Frame = 0
Query:   45 RITQLARDRSAVYRQREAARAAQKQELELRECTFTPD-TGASNGRRGGXXXXXXXXXXEAVPVHERLLRQQKDQEAHRALAAAQLEAAALAECSFRPR-----------LVARPRAAAAAAAAPPLHERVWDVQWQREGRLRELAERAHAESAPTFAPAIXXXXXRLAXRARGDDXXXXXXXXXSPTRDRSSMSLSQNPGERLAREAAEXXXXXXXXXXXXXXXXAAENTFTPELSAGTQRLVRRRRELRAPFEERQAALEARSRQRGAARLRCEREREAAWFTPATAPRSDALVRRRMPERARETPEQRCTRMALVEVSAXXXXXXXXXXXXXXXXWGRRMGAEAERRXXXXXXRQAEAASQHAFTPDINPISRALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARPDMYGADNKYRLPVREPWRIAQGIRDKAEERAARLATAQAEREVAEMQACTFAPTLPTPPPPTSGPILVRGLGRHLELCDAARRAAAAADARAAAAFAVRPGAQRRGSDGLTLVQPFRLS 618
            RI +LARDR A+Y  RE  R   ++E E +ECTF P+   +S  RRG              P+HERL ++ +++EA RALA   LE  AL EC+F+ R                  A  AA   PLH+RVW+V+ +RE +LR L          TFAP       R++ R           XXX    +    S +     RL  +A                  A  +TF P +S GT+ LVR+R +L+APFE+R+A ++A+ ++R   R     + E  WF P TA R+DAL+RRRMPER  ET E+R  RMA                            A+  RR      ++A+   +  F P +NP++ ++A                                                                                      A   +YG  N+YRL VREP R+   +R +  E+  R    + E+EVAEMQ CTF P   +      GP+LVRGLGRHLEL D A++         A AF VRP A RR   G T+V+PF LS
Sbjct:  360 RIKELARDRQALYSDRERRRKELQEEAETKECTFHPNIVSSSAARRGAAGHGSGGAGARRPPLHERLHKEAREREAARALAHHHLENEALRECTFQARGAWWGGDGGREPTLNTTGAVPAADHRPLHQRVWEVEREREHKLRLLVADKEEREGATFAPP---PMGRVSERLADTRPAFAGGXXXXXCGEGVGRSAT-----RLQEQAMWARERRRLRVQEHEEAEARMSTFEPSISRGTKSLVRKRPDLQAPFEQRRAIMDAKRKERERLRQEARAKEETGWFNPTTAQRTDALLRRRMPERLEETVEERVKRMAA---------------------------ADDHRRRNFVMTQKAKEKLECTFRPSLNPVTHSMAQASPLDELVNNLRGQRVRERVKAKVSDAQACSHKPTLLAEAALLHTDAEGAGASRDGGGCAGSGGRGA------------------AAAGLYGPGNRYRLSVREPARMTAELRAREREQEERFNALRQEKEVAEMQRCTFVPQTNSAILRAEGPVLVRGLGRHLELKDVAQQRERERRXXEARAFGVRPRAVRRSVLGETIVEPFSLS 892          
BLAST of jgi.p|Trimin1|353256 vs. uniprot
Match: A0A7S1XLT3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLT3_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.850e-13
Identity = 137/584 (23.46%), Postives = 209/584 (35.79%), Query Frame = 0
Query:   49 LARDRSAVYRQREAARAAQKQELELRECTFTPDTGASNGRRGGXXXXXXXXXXEAVPVHERLLRQQKDQEAHRALAAAQLEAAALAECSFRPRLVARP-RAAAAAAAAPPLHERVWDVQWQREGRLRELAERAHAESAP--TFAPAIXXXXXRLAXRARGDDXXXXXXXXXSPTRDRSSMSLSQNP--------GERLAREAAEXXXXXXXXXXXXXXXXAAENTFTPELSAGTQRLVRRRRELRAPFEERQAALEARSRQRGAARLRCEREREAAWFTPATAPRSDALVRR-RMPERARETPEQRCTRMALVEVSAXXXXXXXXXXXXXXXXWGRRMGAEAERRXXXXXXRQAEAASQHAFTPDINPISRALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARPDMYGADNKYRLPVREPWRIAQGIRDKAEERAARLATAQAEREVAEMQACTFAPTLPTPPPPTSGP--ILVRGLGRHLELCDAARRAAAAADARAAAAFAVRPGAQRRGSDGLTLVQPFRLS 618
            L  DR+  Y +RE  R  ++ E E   CTF P+      +  G          + +   ERL ++  ++E  R      LE A +++  F+P +     R  A  A   P+H R  +VQ  +   +       H E+ P  TF P I     R+A +              +P    S+  ++  P          RL  EA                   +E  F P+++ GT++++     LR PF ERQAALEA+ RQR   R     E E AW++P    +++ ++++ R P+      E R  R+  + V                         +AER        Q EA     F P I+P+SR LAA                                                                                       P + G  +  +  +      A+     AE+R       +AERE+ EM+ CTF P   T  PP   P  ++VRGLGRHLEL + A+R A     R   A+     +  R + G+T+ +PF+LS
Sbjct:   38 LRADRTPFYDERERQRLEREAE-ETEGCTFRPELAPGTIKALGPQRSGT----DPMGTSERLYQEADEREVVRLCTKYHLEEAEMSQYPFQPEIDTHSKRLVARNADYAPIHVRSSEVQRNKAMNISAAKTNLH-ENHPEHTFKPKIDPVSARMAKKREEQLLHGGESGAEAPVLAWSAHEMADKPRAKRMPAVARRLEAEAKAAQVRKEKAIEAREAQLESETPFAPQIARGTKKIMHNNAVLRLPFRERQAALEAKRRQRAETRAALAAEAENAWYSPHLTSKTEKILQKSRKPQHRARRLESRRDRITRLSVG------------------------DAERIAASRRAAQEEAQKGMPFRPKIDPVSRKLAASTNDYEKHANVRGERMKRRSEEVARLRFLEECSFAPRLESDPVARDMT-------------------------------------RMPTVSGDMSHIKTVLDSSMDYARKQETLAEKRQRE----RAERELREMRECTFKPKTITRKPPKVAPKPVVVRGLGRHLELREMAKRKAEEQRERERKAWGGSTSSGGRNAAGVTIQKPFKLS 550          
BLAST of jgi.p|Trimin1|353256 vs. uniprot
Match: A0A6H5KJ13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ13_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 3.570e-10
Identity = 51/122 (41.80%), Postives = 63/122 (51.64%), Query Frame = 0
Query:  497 ARPDMYGADNKYRLPVREPWRIAQGIRDKAEERAARLATAQAEREVAEMQACTFAPTLPTPPPPTSGPILVRGLGRHLELCDAARRAAAAADARAAAAFAVRPGAQRRGSDGLTLVQPFRLS 618
            A  D+YG  N+YRL VREP R+   +R +  E+  R  +A    E                     GP+LVRGLGRHLEL D A++       R A AF VRPGA RR   G T+V+PF LS
Sbjct:   94 AAADLYGPGNRYRLSVREPARMTAELRAREREQEERTNSAILRAE---------------------GPVLVRGLGRHLELKDVAQQRERERREREAQAFGVRPGAVRRSVLGETIVEPFSLS 194          
BLAST of jgi.p|Trimin1|353256 vs. uniprot
Match: A0A2P6TS59_CHLSO (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TS59_CHLSO)

HSP 1 Score: 65.1 bits (157), Expect = 3.640e-7
Identity = 51/116 (43.97%), Postives = 62/116 (53.45%), Query Frame = 0
Query:  518 IAQGIRDKAEERAARLATAQAEREVAEMQACTFAPTLPTPPPPTSGPILVRGLGRHLELCDAARRAAAAADARAAAAFAVRPGAQRRGSDGLTLVQPFRLSG-----AEARVKWAA 628
            + Q I +   ER AR A A+AE E   ++ C+FAP +        GP+LVRGL RHLEL   A R  A ADARAA  F   P    R   G T+ QPF+L G     A+A  K AA
Sbjct:  666 LTQRIAEYQAERDARAAAARAEEEEQRLRECSFAPDINRTRVQAKGPVLVRGLDRHLELRQLADRRRAEADARAARVFHANP----RTKQGATVPQPFQLRGHALLEAKAAQKQAA 777          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353256 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A836CJI8_9STRA5.390e-274100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FJD2_ECTSI6.840e-4930.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XLT3_9STRA7.850e-1323.46Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6H5KJ13_9PHAE3.570e-1041.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P6TS59_CHLSO3.640e-743.97Uncharacterized protein n=1 Tax=Chlorella sorokini... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 376..396
NoneNo IPR availableCOILSCoilCoilcoord: 232..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..463
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..75
NoneNo IPR availablePANTHERPTHR37028:SF4UNNAMED PRODUCTcoord: 526..596
NoneNo IPR availablePANTHERPTHR37028:SF4UNNAMED PRODUCTcoord: 227..412
coord: 19..202
NoneNo IPR availablePANTHERPTHR37028UNNAMED PRODUCT-RELATEDcoord: 227..412
coord: 526..596
coord: 19..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_152contigContig_152:178651..183096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353256mRNA_15018Tribonema minus UTEX_B_3156 mRNAContig_152 178651..183096 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353256|estExt_Genemark1.C_Ctg_1520033 ID=Trimin1|353256|estExt_Genemark1.C_Ctg_1520033|Name=jgi.p|Trimin1|353256|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=675bp
MPPAAAPSPPPPPPPRHRQQQRGKSAVAAAAAAPRPGTAPPRPSRITQLA
RDRSAVYRQREAARAAQKQELELRECTFTPDTGASNGRRGGRSGGGGGAA
AEAVPVHERLLRQQKDQEAHRALAAAQLEAAALAECSFRPRLVARPRAAA
AAAAAPPLHERVWDVQWQREGRLRELAERAHAESAPTFAPAIAPASARLA
ARARGDDGGGGGGAGGSPTRDRSSMSLSQNPGERLAREAAEARERAEAAA
AAAAAEAAAENTFTPELSAGTQRLVRRRRELRAPFEERQAALEARSRQRG
AARLRCEREREAAWFTPATAPRSDALVRRRMPERARETPEQRCTRMALVE
VSAAAAAAAAAAAVACACAWGRRMGAEAERRRAAAARRQAEAASQHAFTP
DINPISRALAAAAAAAAAAGGAPSPDAAARARGASGAPRKPPPPSHSGRR
WWRRRRSSSSRHRRGARAGAAAGGGGGGEQGDGGGGDGGGGSGGGHARPD
MYGADNKYRLPVREPWRIAQGIRDKAEERAARLATAQAEREVAEMQACTF
APTLPTPPPPTSGPILVRGLGRHLELCDAARRAAAAADARAAAAFAVRPG
AQRRGSDGLTLVQPFRLSGAEARVKWAARRRAAAAAAAAACPFAPRTAAG
ARAARVAALLLSDDDGGSSGGSEF*
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