mRNA_15017 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|177468
Unique NamemRNA_15017
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|177468 vs. uniprot
Match: A0A836CKN2_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN2_9STRA)

HSP 1 Score: 628 bits (1620), Expect = 1.150e-224
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 1 
Query:    1 MPAAQAGGKAAAPRRAALGDITNDVHKQNNGGGKQSGHPTKVYATRSKSREARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVPSARSANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDTCELMAACGDLKAVRSKFTSKQFGAVATMDIDLSCDDEEESDADISI 1197
            MPAAQAGGKAAAPRRAALGDITNDVHKQNNGGGKQSGHPTKVYATRSKSREARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVPSARSANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDTCELMAACGDLKAVRSKFTSKQFGAVATMDIDLSCDDEEESDADISI
Sbjct:    1 MPAAQAGGKAAAPRRAALGDITNDVHKQNNGGGKQSGHPTKVYATRSKSREARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVPSARSANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDTCELMAACGDLKAVRSKFTSKQFGAVATMDIDLSCDDEEESDADISI 399
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BLAST of jgi.p|Trimin1|177468 vs. uniprot
Match: A0A6H5JK39_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK39_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 2.500e-110
Identity = 176/277 (63.54%), Postives = 220/277 (79.42%), Query Frame = 1 
Query:  349 SARSANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDTCELMAAC----GDLKAVRSKFTSKQFGAVATMDIDLSCDD 1167
            ++R+  DID+RD  EPLAVTEYVEDLY +LR +E  T++    ++ Q +V+ RM +IL+DWLVEVHL+F+LVPDTLYLTVY+I +YL L   VTR NLQLVGVTA+LLASKYEEIYPP+IRDLV++TD+AY ++QIL+ME+ M + L+FR+TVPT YCFLLRYLKAAHAD++IVQLSCYVAERMLQE  ML +LPSV AC AIY+AR+N+GR  WSPTLEKYT Y   DL  CL   CE+        GDL+AV+ KF+S +FG+VATM + +  DD
Sbjct:  139 ASRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELE-TVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMASALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVSMLDYLPSVVACCAIYVARKNMGRTCWSPTLEKYTKYRVEDLMPCL---CEISRVLKQEGGDLEAVKKKFSSSKFGSVATMKVSILPDD 411
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BLAST of jgi.p|Trimin1|177468 vs. uniprot
Match: A0A836CHW6_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHW6_9STRA)

HSP 1 Score: 295 bits (755), Expect = 6.190e-96
Identity = 151/225 (67.11%), Postives = 181/225 (80.44%), Query Frame = 1 
Query:  478 IEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDTCELMAACGDLKAVRSKFTSKQFGAVATMDID 1152
            +E+Q +++ARM AILVDWLVEVH+RFRLVPDTLYL +Y + RYLA    V R  LQ+ GV ALLLASKYEEIYPPE+ DLVY+TD+A  +E IL  E +ML RLEFR+TVPT YCFLLRYLKAAHADR IVQL+CY++ERML EARMLRHLPSVAA AA+YL+RR   RNAWSPTL +YTGY  A L  CLRD CE M    DL+A + KF +++FGAV+++D+D
Sbjct:    1 MEEQPYINARMRAILVDWLVEVHMRFRLVPDTLYLAIYALDRYLA-AATVAREGLQVAGVAALLLASKYEEIYPPEMCDLVYVTDRACAREAILAAERDMLARLEFRLTVPTVYCFLLRYLKAAHADRCIVQLACYISERMLLEARMLRHLPSVAASAAVYLSRRACNRNAWSPTLARYTGYNVAALTPCLRDICEAMRRPCDLRASKRKFGTREFGAVSSLDVD 224
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BLAST of jgi.p|Trimin1|177468 vs. uniprot
Match: F0XYQ7_AURAN (Cyclin N-terminal domain-containing protein (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XYQ7_AURAN)

HSP 1 Score: 291 bits (746), Expect = 4.810e-94
Identity = 150/264 (56.82%), Postives = 204/264 (77.27%), Query Frame = 1 
Query:  367 DIDERDRKEPLAVTEYVEDL----YSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDTCELMAAC-GDLKAVRSKFTSKQFGAVATM 1143
            D+D RD   P AVTEYV D+    Y++ R +E  T ++P  +  Q H++ +M AIL+DWLVEVHL+F+LVP+TLYLTV +I RYL  +P V RSNLQLVGV+ALLLASKYEEIYPPE++DLVY+TDKAYT+EQIL ME +M+  L++++T+ + +CF++RYLKA HADRR+V L+ YVAERMLQE  ML++LPS+ A  A+Y+AR+NLGRNAWSPTL  Y  Y E+ L +CL +   ++ +  G L+AV+ K++S+++G VA M
Sbjct:    1 DVDARDASNPQAVTEYVNDMRAPAYAHFREKELETSVNPTYMSRQAHINEKMRAILIDWLVEVHLKFKLVPETLYLTVNLIDRYLLGSP-VERSNLQLVGVSALLLASKYEEIYPPELKDLVYITDKAYTQEQILSMEEKMVKALKYKMTIASIHCFMMRYLKAGHADRRMVWLASYVAERMLQEYAMLKYLPSMVAACAVYIARKNLGRNAWSPTLLHYAQYTESSLRACLEEMSSVIHSTKGSLQAVKKKYSSEKYGQVALM 263
[Close]
BLAST of jgi.p|Trimin1|177468 vs. uniprot
Match: B8BZ02_THAPS (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ02_THAPS)

HSP 1 Score: 286 bits (731), Expect = 1.610e-91
Identity = 148/263 (56.27%), Postives = 197/263 (74.90%), Query Frame = 1 
Query:  364 NDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDT-CELMAACGDLKAVRSKFTSKQFGAVATMDI 1149
            +DIDERD  +PL  T YV+D+Y + R +E  T + P  +EDQ+ ++ RM +ILVDWLVEVHL+F+LVP+TLYLTV VI RYLA T  V+R  LQLVGVTALL+ASKYEEIYPPE+RDLVY+ D+AY+K +IL+ME  +L  LE++IT+P+ + FL+RYLKAAHAD++IVQLSC++ +  LQ   ML +LPS  A AA+++ARR +GRNAWSPTL KY  Y E D+    R    E  ++  +L+AV  K+TS ++G VA + I
Sbjct:   16 DDIDERDSDDPLCATSYVQDMYEHFRGKEVFTSVRPVYMEDQQFINERMRSILVDWLVEVHLKFKLVPETLYLTVNVIDRYLAKTE-VSRPKLQLVGVTALLIASKYEEIYPPELRDLVYICDRAYSKNEILEMEEIILKSLEYQITIPSAHAFLVRYLKAAHADKKIVQLSCFILDGTLQSYNMLHYLPSQLAAAAVFIARRTVGRNAWSPTLLKYAQYREEDIMPVARAVLAEKSSSSTELRAVNKKYTSSRYGGVANISI 277
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BLAST of jgi.p|Trimin1|177468 vs. uniprot
Match: A0A7S2PNA7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PNA7_9STRA)

HSP 1 Score: 290 bits (742), Expect = 2.070e-91
Identity = 149/262 (56.87%), Postives = 199/262 (75.95%), Query Frame = 1 
Query:  361 ANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDT-CELMAACGDLKAVRSKFTSKQFGAVATM 1143
            A+DIDERD  +PL VT YV+D+Y + R +E  T + P  +EDQ++++ RM +ILVDWLVEVHL+F+LVP+TLYLTV +I RYLA T  VTR  LQLVGVTALL+ASKYEEIYPPE+RDLVY+ D+AY+K +IL+ME  +L +L+++IT+P+ + FL+RYLKAAHAD++IVQLSCY+ +  LQ   ML +LPS  A A+I +ARR +GRN+WSPTL KY  Y E D+    R    E  +A  +L+AV  K+TS ++G VA +
Sbjct:  143 ADDIDERDTDDPLCVTSYVQDMYEHFRTKEGSTSVRPVYMEDQQYINERMRSILVDWLVEVHLKFKLVPETLYLTVNIIDRYLAKTE-VTRPKLQLVGVTALLIASKYEEIYPPELRDLVYICDRAYSKNEILEMEEVVLKKLQYQITIPSAHAFLVRYLKAAHADKKIVQLSCYILDGTLQSYNMLHYLPSQLAAASICIARRTVGRNSWSPTLLKYAQYCEEDIKPVARAVLAEKASASTELRAVNKKYTSSRYGGVANL 403
[Close]
BLAST of jgi.p|Trimin1|177468 vs. uniprot
Match: A0A448ZSV9_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSV9_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.160e-90
Identity = 146/269 (54.28%), Postives = 206/269 (76.58%), Query Frame = 1 
Query:  361 ANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDT-CELMAACGDLKAVRSKFTSKQFGAVATMDIDLSCD 1164
            A++IDERD ++PL  TEYV+D+Y + RA+E +T + P  +E+Q H++ RM +ILVDWLVEVHL+F+LVP+TLYLT+ +I RYL     V+R  LQLVGVT+LL+ASKYEEIYPPE+RDLVY+ D+AYT+++I++ME ++L  LE+ IT+P+ + FL+R+LKAAHAD+RIVQLSC++ +  LQ   +L +LPS  A AA+++ARR +GRN+WSPTL +Y  Y E ++A   R    E  +A  +L+AV  K+TS ++GAVA +   LSCD
Sbjct:  120 ADNIDERDAEDPLCATEYVQDMYDHFRAKEGITSVRPLYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLE-RQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRKEIIEMEEQILKTLEYNITIPSAHAFLVRFLKAAHADKRIVQLSCFILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLRYAIYREEEIAPIARAVMAEKSSAAHELRAVNKKYTSSRYGAVANLA--LSCD 385
[Close]
BLAST of jgi.p|Trimin1|177468 vs. uniprot
Match: A0A7S4AAP4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AAP4_9STRA)

HSP 1 Score: 284 bits (726), Expect = 2.380e-89
Identity = 141/262 (53.82%), Postives = 201/262 (76.72%), Query Frame = 1 
Query:  361 ANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDT-CELMAACGDLKAVRSKFTSKQFGAVATM 1143
            A++IDERD ++PL  TEYV+D+Y + R +E +T + P  +E+Q H++ RM +ILVDWLVEVHL+F+LVP+TLYLT+ +I RYL     V+R  LQLVGVT+LL+ASKYEEIYPPE+RDLVY+ D+AYT+++I++ME ++L  LE+ IT+P+ + FL+RYLKAAHAD+RIVQLSC++ +  LQ   +L +LPS  A AA+++ARR +GRN+WSPTL +Y  Y E ++A   +    E  +A  +L+AV  K+TS ++GAVA +
Sbjct:  117 ADNIDERDAEDPLCATEYVQDMYDHFREKEAITSVRPLYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLE-RQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRKEIIEMEEQILKTLEYNITIPSAHAFLVRYLKAAHADKRIVQLSCFILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLRYAVYREEEIAPVAKAVMAEKSSAAHELRAVNKKYTSSRYGAVANL 377
[Close]
BLAST of jgi.p|Trimin1|177468 vs. uniprot
Match: A0A1E7FEB9_9STRA (Cyclin_N-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEB9_9STRA)

HSP 1 Score: 276 bits (707), Expect = 4.680e-88
Identity = 139/262 (53.05%), Postives = 197/262 (75.19%), Query Frame = 1 
Query:  361 ANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDTCELMA-ACGDLKAVRSKFTSKQFGAVATM 1143
            +++IDERD ++PL  TEYV+D+Y + R +E  T + P  +++Q H++ RM +ILVDWLVEVHL+F+LVP+TLYLT+ +I RYL     V+R  LQLVGVT+LL+ASKYEEIYPPE+RDLVY+ D+AYT+ +I++ME ++L  LE+ IT+P+ + FL+R+LKAAHAD+RIVQLSCY+ +  LQ   +L +LPS  A AA+++ARR +GRN+WSPTL KY  Y E D+    +      A A  +L+AV  K+TS ++G VA++
Sbjct:    4 SDNIDERDAEDPLCATEYVQDMYEHFRLKEGSTSVRPLYMDNQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLE-RQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRTEIIEMEEKILKTLEYNITIPSAHAFLVRFLKAAHADKRIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLKYAKYREEDIMPIAKAVMNEKANAAQELRAVNKKYTSSRYGGVASL 264
[Close]
BLAST of jgi.p|Trimin1|177468 vs. uniprot
Match: A0A7S3Q0F9_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0F9_9STRA)

HSP 1 Score: 280 bits (715), Expect = 5.770e-88
Identity = 144/266 (54.14%), Postives = 197/266 (74.06%), Query Frame = 1 
Query:  358 SANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDT-CELMAACGDLKAVRSKFTSKQFGAVATMDID 1152
            + +DIDERD+ +PL VT YV+D+Y +   +EQ T + P  +EDQ +++ RM +ILVDWLVEVHL+F+LVP+TLYLT+ +I R+L     ++R  LQLVGVT+LL+ASKYEEIYPPE+RDLVY+ D AY+KE IL+ME +ML  LE+RIT+P+ + FL+RYLKAAHADR+IVQLSCY+ +  LQ   +L  LPS  A A++ +AR+ +GRNAWSPTL KY  Y E D+    R    E  ++  +L+AV  K+ S+++GAVA   +D
Sbjct:   96 TVDDIDERDKNDPLCVTSYVQDMYEHFADKEQSTSVRPVYMEDQSNINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRFLE-KEDISRPKLQLVGVTSLLIASKYEEIYPPELRDLVYICDHAYSKELILEMEYKMLTTLEYRITIPSAHAFLVRYLKAAHADRKIVQLSCYILDGTLQSYNLLHFLPSQLAAASVLIARKAVGRNAWSPTLLKYATYCEEDITPVARAILAEKTSSTQELRAVNKKYQSQRYGAVANTPLD 360
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|177468 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKN2_9STRA1.150e-224100.00Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A6H5JK39_9PHAE2.500e-11063.54Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A836CHW6_9STRA6.190e-9667.11Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
F0XYQ7_AURAN4.810e-9456.82Cyclin N-terminal domain-containing protein (Fragm... [more]
B8BZ02_THAPS1.610e-9156.27Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A7S2PNA7_9STRA2.070e-9156.87Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A448ZSV9_9STRA1.160e-9054.28Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A7S4AAP4_9STRA2.380e-8953.82Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1E7FEB9_9STRA4.680e-8853.05Cyclin_N-domain-containing protein n=1 Tax=Fragila... [more]
A0A7S3Q0F9_9STRA5.770e-8854.14Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_152contigContig_152:174812..177566 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|177468|e_gw1.152.22.1
KEGG TC1.I.1.1.3
BRITEko00000,ko00001,ko03032,ko03036
KEGG Pathwayko04068,ko04110,ko04114,ko04115,ko04218,ko04914,ko05166,map04068,map04110,map04114,map04115,map04218,map04914,map05166
KEGG koko:K21770,ko:K21777
Descriptioncell division
COG categoryD
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5024@1|root,KOG0653@2759|Eukaryota
Evalue7.23e-112
Seed ortholog2880.D7FVM0
Hectar predicted targeting categoryother localisation
TranscriptId177790
TrackFilteredModels1
ProteinId177468
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177468gene_15017Tribonema minus UTEX_B_3156 geneContig_152 174812..177566 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177468Trimin1|177468|e_gw1.152.22.1Tribonema minus UTEX_B_3156 polypeptideContig_152 174812..177566 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15017_3exon_15017_3Tribonema minus UTEX_B_3156 exonContig_152 174812..174920 -
exon_15017_2exon_15017_2Tribonema minus UTEX_B_3156 exonContig_152 175806..176036 -
exon_15017_1exon_15017_1Tribonema minus UTEX_B_3156 exonContig_152 176707..177566 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15017CDS_15017Tribonema minus UTEX_B_3156 CDSContig_152 176707..177566 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15017 ID=mRNA_15017|Name=jgi.p|Trimin1|177468|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1200bp|location=Sequence derived from alignment at Contig_152:174812..177566- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCGCAGCCCAGGCAGGCGGCAAGGCTGCAGCTCCCAGGAGGGCCGC
ACTTGGGGATATAACCAACGATGTGCACAAGCAGAACAACGGCGGGGGCA
AGCAGTCTGGGCACCCCACGAAGGTCTATGCCACACGCAGCAAGAGCCGA
GAGGCACGCTCGTCCTCCTCCTCAGAGAATGCTCAGCAGCAGGCGCCTCA
CTCGAGTGCGGCGGTTGCATCCAAGCCTGCTGCGGCGGCGGCACAGCAGC
AGGCGGGTTCCGCAGGGGCTGCGAAGGCCTCAGCTGCCAGAGCCGGGGCG
TCCCAGGCCGCAGCAGCAGGCCCGTCCTCGGGGGGCGCAGTGGTGCCGTC
CGCGCGTTCCGCCAACGACATCGACGAGCGGGACAGGAAGGAGCCCCTGG
CGGTGACGGAGTACGTGGAGGATCTGTACTCGTACCTGCGCGCGCAGGAG
CAGGTGACGCGCCTGTCGCCCGCGGCGATAGAGGACCAGGAGCACGTCAG
CGCGCGCATGTTCGCGATCCTTGTGGACTGGCTCGTGGAGGTGCACCTGC
GCTTCCGCCTCGTCCCCGACACGCTGTACCTCACGGTGTACGTCATCGCG
CGCTACCTCGCGCTCACGCCCGCCGTCACGCGCAGCAACCTGCAGCTCGT
CGGCGTCACGGCGCTGCTGCTCGCGTCCAAGTACGAGGAGATCTACCCCC
CCGAGATCCGCGACCTCGTCTACATGACGGACAAGGCGTACACCAAGGAG
CAGATCCTGGACATGGAGACGGAGATGCTCAACCGCCTCGAGTTCCGCAT
CACCGTGCCGACGACGTACTGCTTCCTGCTGCGCTACCTCAAGGCGGCGC
ACGCAGACCGCCGCATCGTGCAGCTCTCGTGCTACGTCGCGGAGCGCATG
CTGCAGGAGGCGCGCATGCTGCGCCACCTGCCGTCCGTCGCGGCGTGCGC
GGCCATCTACCTCGCGCGGCGCAACCTCGGCCGCAACGCGTGGTCGCCCA
CGCTGGAGAAGTACACGGGCTACGTCGAGGCGGACCTGGCCTCGTGCCTG
CGCGACACGTGCGAGCTCATGGCCGCGTGCGGCGACCTCAAGGCCGTCCG
GAGCAAGTTCACATCCAAGCAGTTCGGCGCCGTCGCCACCATGGACATTG
ACCTCTCCTGCGACGACGAAGAGGAGTCTGACGCCGACATCAGCATCTGA
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protein sequence of jgi.p|Trimin1|177468

>Trimin1|177468|e_gw1.152.22.1 ID=Trimin1|177468|e_gw1.152.22.1|Name=jgi.p|Trimin1|177468|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=400bp
MPAAQAGGKAAAPRRAALGDITNDVHKQNNGGGKQSGHPTKVYATRSKSR
EARSSSSSENAQQQAPHSSAAVASKPAAAAAQQQAGSAGAAKASAARAGA
SQAAAAGPSSGGAVVPSARSANDIDERDRKEPLAVTEYVEDLYSYLRAQE
QVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIA
RYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKE
QILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERM
LQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCL
RDTCELMAACGDLKAVRSKFTSKQFGAVATMDIDLSCDDEEESDADISI*
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mRNA from alignment at Contig_152:174812..177566-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15017 ID=mRNA_15017|Name=jgi.p|Trimin1|177468|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2755bp|location=Sequence derived from alignment at Contig_152:174812..177566- (Tribonema minus UTEX_B_3156 )
ATGCCCGCAGCCCAGGCAGGCGGCAAGGCTGCAGCTCCCAGGAGGGCCGC
ACTTGGGGATATAACCAACGATGTGCACAAGCAGAACAACGGCGGGGGCA
AGCAGTCTGGGCACCCCACGAAGGTCTATGCCACACGCAGCAAGAGCCGA
GAGGCACGCTCGTCCTCCTCCTCAGAGAATGCTCAGCAGCAGGCGCCTCA
CTCGAGTGCGGCGGTTGCATCCAAGCCTGCTGCGGCGGCGGCACAGCAGC
AGGCGGGTTCCGCAGGGGCTGCGAAGGCCTCAGCTGCCAGAGCCGGGGCG
TCCCAGGCCGCAGCAGCAGGCCCGTCCTCGGGGGGCGCAGTGGTGCCGTC
CGCGCGTTCCGCCAACGACATCGACGAGCGGGACAGGAAGGAGCCCCTGG
CGGTGACGGAGTACGTGGAGGATCTGTACTCGTACCTGCGCGCGCAGGAG
CAGGTGACGCGCCTGTCGCCCGCGGCGATAGAGGACCAGGAGCACGTCAG
CGCGCGCATGTTCGCGATCCTTGTGGACTGGCTCGTGGAGGTGCACCTGC
GCTTCCGCCTCGTCCCCGACACGCTGTACCTCACGGTGTACGTCATCGCG
CGCTACCTCGCGCTCACGCCCGCCGTCACGCGCAGCAACCTGCAGCTCGT
CGGCGTCACGGCGCTGCTGCTCGCGTCCAAGTACGAGGAGATCTACCCCC
CCGAGATCCGCGACCTCGTCTACATGACGGACAAGGCGTACACCAAGGAG
CAGATCCTGGACATGGAGACGGAGATGCTCAACCGCCTCGAGTTCCGCAT
CACCGTGCCGACGACGTACTGCTTCCTGCTGCGCTACCTCAAGGCGGCGC
ACGCAGACCGGTGAGTAACGTGTTTGATTTACTTGTGTTCTTGGTTCCGT
GGCCCGGTGACTGACGTGTACTTGTTGCGGACCGATGAGTGACGTATTTT
TTTCTTGGCTTCGCGGCCAGGTGAGCACCGTATTTTTGTTTGGTGGTTGA
GGGACGCGCGGCGCGCGGCGCGCTGCTGCTGCTGCCGTGCCGGGGCGGGG
CCGCCTGTAGTGGCAGATTTGACAGGCAGCGCCGCCGGCAGAATGTGCGC
GATCGGCGCGCCGTTGCGCCTCGCGCGTGAGTACTCAAGCGACACTGCCT
GCCAATGCCCCTGCGCGATTTGATGTCGAACAGCGCGCGCCGCTAGAGGC
GCGCGCGCTGCTAGGCGCGGGCCGTGCAGAGGGCACATGATGCATCGCTG
CGACTGGCTGGCGCTGGCTGATTATTCTTTATCCACGATTTCCTCTTCAT
AAATGTATCCATAAACATTCATTCCCGACTACCAGTAGCTTGTGTCAACC
CCTCTTCTCGTTCCCCCGCCCCCCGCCGCCGCAGCCGCTCTCGTGCTACG
TCGCGGAGCGCAAGCTGCGCCACCTGGTTCATTTCATTATTTCTACAATA
ATTACAATTCATCTCCCAACTACTAGCAGCTTGTGTCAACCCCCCTCACC
GCTCATTCCTTCGCCCCCCCACTGCCGCAGCCGCATCGTGCAGCTCTCGT
GCTACGTCGCGGAGCGCATGCTGCAGGAGGCGCGCATGCTGCGCCACCTG
CCGTCCGTCGCGGCGTGCGCGGCCATCTACCTCGCGCGGCGCAACCTCGG
CCGCAACGCGTGGTCGCCCACGCTGGAGAAGTACACGGGCTACGTCGAGG
CGGACCTGGCCTCGTGCCTGCGCGACACGTGCGAGCTCATGGCCGCGTGC
GGCGACCTCAAGTGAGTCGCGAGTCGTGAGTGTCGTCGACCTTGAGTGAG
TCGCGAGTCATGAGTGTCGTCTCGTAGCTCGCCGCGCGTGCCTGCACGAC
ACGTGCGAGCTCATGGCGGCGTGCGGCGACCTCAAGTGAGTCGCGAGTCT
TGAGTTGTCGTGCGCGCGCGCGCGTGCGCCGTGTGCGTGTAGGTGGTGGA
GCGCTGCTGTCATTGACCGTGCGCGCCGAGCGGCGCAGCGGCGCGATGCG
CCGTATGTCAGCGGTAGGTCGTGACTTGATGCAGTGAGTAGCGCGCGCAG
TGTGTGCCGGCCGCTGCTATTGACCGCGCGCGCTGCCGCGCACTGGGAGT
CAAACAGAGGTCACCTCTGGGTGAGGCTTGGTGTTGAGCGTTGTTGCATC
GCGCTTGCGCCGCTGCTCGCCGTGCGCGGACGGTGCTTGTGCTTGCGCAG
GCGACGACGCTGCGTGCGCGCGCCGCTGCACGCGCCTCCATGACGCTCGC
CAATTTTCAAAGCGCGCTGGGCGCGTTGCGGGGCCCGGCAAGGGCGCGCG
CGCGCGCTGCGGCGATGAATGTGCAGTCGCGTAGGCGGCACTGCGCCTCG
CGGACGAGTAGATATTACTTCAGTCGGTCAAGCAGCGCGCGCGGCGGCGG
TTGCTCACAGTGGTGCGCCGCGTCGTTACCGCGGGGACTGCCCGCCGCAG
CAGCAGCGGCGGGCGATGAATTACAGGCGCCTTGATGGCCAGCACGCTGT
CACAACCGGCTGCTGCTGCCGCGGCACAGTCACAAGGACGCACGCACCCA
GACCATGATCGTAAACAACTCCTGCAGTCACCGCAGTCGTCGTCTCTCTG
ACTGACCTCGGCGGTGCCTCTGCAATCTTTTCTTTGTGCACGCCAGGGCC
GTCCGGAGCAAGTTCACATCCAAGCAGTTCGGCGCCGTCGCCACCATGGA
CATTGACCTCTCCTGCGACGACGAAGAGGAGTCTGACGCCGACATCAGCA
TCTGA
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Coding sequence (CDS) from alignment at Contig_152:174812..177566-

>mRNA_15017 ID=mRNA_15017|Name=jgi.p|Trimin1|177468|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1200bp|location=Sequence derived from alignment at Contig_152:174812..177566- (Tribonema minus UTEX_B_3156 )
ATGCCCGCAGCCCAGGCAGGCGGCAAGGCTGCAGCTCCCAGGAGGGCCGC
ACTTGGGGATATAACCAACGATGTGCACAAGCAGAACAACGGCGGGGGCA
AGCAGTCTGGGCACCCCACGAAGGTCTATGCCACACGCAGCAAGAGCCGA
GAGGCACGCTCGTCCTCCTCCTCAGAGAATGCTCAGCAGCAGGCGCCTCA
CTCGAGTGCGGCGGTTGCATCCAAGCCTGCTGCGGCGGCGGCACAGCAGC
AGGCGGGTTCCGCAGGGGCTGCGAAGGCCTCAGCTGCCAGAGCCGGGGCG
TCCCAGGCCGCAGCAGCAGGCCCGTCCTCGGGGGGCGCAGTGGTGCCGTC
CGCGCGTTCCGCCAACGACATCGACGAGCGGGACAGGAAGGAGCCCCTGG
CGGTGACGGAGTACGTGGAGGATCTGTACTCGTACCTGCGCGCGCAGGAG
CAGGTGACGCGCCTGTCGCCCGCGGCGATAGAGGACCAGGAGCACGTCAG
CGCGCGCATGTTCGCGATCCTTGTGGACTGGCTCGTGGAGGTGCACCTGC
GCTTCCGCCTCGTCCCCGACACGCTGTACCTCACGGTGTACGTCATCGCG
CGCTACCTCGCGCTCACGCCCGCCGTCACGCGCAGCAACCTGCAGCTCGT
CGGCGTCACGGCGCTGCTGCTCGCGTCCAAGTACGAGGAGATCTACCCCC
CCGAGATCCGCGACCTCGTCTACATGACGGACAAGGCGTACACCAAGGAG
CAGATCCTGGACATGGAGACGGAGATGCTCAACCGCCTCGAGTTCCGCAT
CACCGTGCCGACGACGTACTGCTTCCTGCTGCGCTACCTCAAGGCGGCGC
ACGCAGACCGCCGCATCGTGCAGCTCTCGTGCTACGTCGCGGAGCGCATG
CTGCAGGAGGCGCGCATGCTGCGCCACCTGCCGTCCGTCGCGGCGTGCGC
GGCCATCTACCTCGCGCGGCGCAACCTCGGCCGCAACGCGTGGTCGCCCA
CGCTGGAGAAGTACACGGGCTACGTCGAGGCGGACCTGGCCTCGTGCCTG
CGCGACACGTGCGAGCTCATGGCCGCGTGCGGCGACCTCAAGGCCGTCCG
GAGCAAGTTCACATCCAAGCAGTTCGGCGCCGTCGCCACCATGGACATTG
ACCTCTCCTGCGACGACGAAGAGGAGTCTGACGCCGACATCAGCATCTGA
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