Trimin1|353236|estExt_Genemark1.C_Ctg_1510044 (polypeptide) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A835ZAR5_9STRA (Ribonuclease H-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAR5_9STRA) HSP 1 Score: 613 bits (1580), Expect = 7.190e-222 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
Query: 1 MEWQPEASGMPQGLGHYDQHGASDYQHTHQEGGGFVQHSQWQYHTPDQETATAMPYVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAFKKVRCHHAF 301
MEWQPEASGMPQGLGHYDQHGASDYQHTHQEGGGFVQHSQWQYHTPDQETATAMPYVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAFKKVRCHHAF
Sbjct: 1 MEWQPEASGMPQGLGHYDQHGASDYQHTHQEGGGFVQHSQWQYHTPDQETATAMPYVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAFKKVRCHHAF 301
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A482SJB0_9ARCH (3'-5' exonuclease domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJB0_9ARCH) HSP 1 Score: 157 bits (397), Expect = 1.310e-42 Identity = 89/235 (37.87%), Postives = 136/235 (57.87%), Query Frame = 0
Query: 47 DQETATAMPYVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSP------PHRTALLQIASRAADGTEAVFLIDLLALLPL-CAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEEC----PDFNIDDLLQDID 270
+ E +P+ D+P + V+ +LQ D I+ +DTET+P F R+ P+ T+L+Q+A R++ G E+V ++D+L L +D L + +KVG L+ D +EL M Y + +F++++ +L+ + K L PE++N LSLK LV YL+ L KGQQMS+W+ RPL +QI YAACDALVLLRL+D+MV E E+ +FN+ D L+ D
Sbjct: 5 EDEDDRMLPFTFDLPQSSLHFVNDVESLQRLRIAFADCVIVGIDTETRPMFVKRNRANQFVRPNPTSLVQMALRSSSGLESVHIVDMLTLKTQGLLNELDMVLVTVMCDDHCIKVGQSLINDFKELRMSYAHMQSFQKVHAILDTTVLSKVLQPELINTLSLKTLVKQYLHFQLVKGQQMSDWSRRPLGKAQIQYAACDALVLLRLYDAMVCEAEEKALKQTSEFNVRDHLEVFD 239
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A7S3H5J0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5J0_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.500e-42 Identity = 94/208 (45.19%), Postives = 128/208 (61.54%), Query Frame = 0
Query: 56 YVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSP----PHRTALLQIASRAADGTEAVFLIDLL------ALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEI 253
+V D+PS + MV T +Q + L +++I +DTET+P F P++ P+ TAL+QIA R E VF++D++ LL L +D AL K+G GL D+REL YP V AFR + VLE + + K L P + N +SLK LV +L+ +LSK QQMSNWA RPL+SSQ+HYAACDALVLLRL+D++ EI
Sbjct: 44 FVFDLPSTSLIMVTTEEDIQRMKTSLMKATLIGIDTETKPTFVPKAQLVGGPNLTALIQIAVRCPKSIEEVFVVDMIHISRNSRLLIL----LDYALQQGLLENQCFKLGQGLTNDLRELAKSYPTVKAFRLTSCVLETHDLIKYLKPVLTNPISLKNLVKEFLHLNLSKSQQMSNWAKRPLTSSQLHYAACDALVLLRLYDAIYCEI 247
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A7S2GX10_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GX10_9STRA) HSP 1 Score: 150 bits (380), Expect = 2.930e-40 Identity = 101/256 (39.45%), Postives = 140/256 (54.69%), Query Frame = 0
Query: 52 TAMPYVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNF------------------------TPRSPPHRT-------ALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNA 276
T++ +VLDIP D++ V + A +LR ++II +DTETQP F T RSP + ALLQIA R A G E V L D L LLP + + L FRS ++LK+GHGL QD+ EL+ YP + F+ + VLE + + K + P M SL+ +VL +L+ +L+K QQ SNW +RPLS Q+ YAACDALVLLRL+D++ EI + +F++ L D P A
Sbjct: 18 TSLTFVLDIPDDRLIYVQNGDGIIQAEEILRTATIIGIDTETQPTFYKYGARNARRKSEGSSAGEKGGEKTSRSPGKKQKFPRNPCALLQIAVRDAAGLETVLLFDTLRLLPGFETELSTILGRVFRSHEVLKLGHGLKQDLFELHASYP-LKGFKALENVLEVDDLSKVVWPGD-QMRSLQVMVLRFLDSALNKKQQCSNWGHRPLSLKQMEYAACDALVLLRLYDAIRAEIGDRDANFDLRALRLDFAVREPEA 271
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A2D4BG54_PYTIN (3'-5' exonuclease domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG54_PYTIN) HSP 1 Score: 150 bits (379), Expect = 1.260e-39 Identity = 91/241 (37.76%), Postives = 131/241 (54.36%), Query Frame = 0
Query: 56 YVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAFKKVR 296
Y ++ P + V VD + + R ++I+ +DTET+P F + HR +LLQIA R D E VF++DLL L P + L F S+ ++K+G L+ D++EL YP + FR V+E N M L LSL+KLV YL L+K QQMSNW RPL++SQIHYAACDALVL+ L+D ++ + P FN+D + +D +C C + + K+ R
Sbjct: 19 YTIERPEELVKFVDDKETMHYFSERARLATIVGIDTETRPQFRDKHRSHRCSLLQIALRLRDTKEEVFILDLLKLKP---HMYNKTLLGLFLSQSVIKLGQSLLGDLKELASSYPGASCFRVAKAVVEVNDMSISLMG-AHQALSLQKLVFLYLGKRLTKTQQMSNWNRRPLTTSQIHYAACDALVLIHLYDVLLERLKANKPHFNVDSISNVLDVHIDLPPKCQLCFEYFDNKRGLKEHR 255
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: G4ZEW8_PHYSP (3'-5' exonuclease domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZEW8_PHYSP) HSP 1 Score: 150 bits (378), Expect = 1.020e-38 Identity = 92/241 (38.17%), Postives = 134/241 (55.60%), Query Frame = 0
Query: 56 YVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAFKKVR 296
YV+D + V + + LR + ++ LDTET+P + P+ ALLQIA R A TE VF++D L L A +S L F S+ I+K+G +QD++EL YPQ + F GV+E N + L N LSL+KLV YL+ L+K QQMSNW RPL++SQ+HYAA DALVL+ L+D +++ I ++ F + ++ +D P +C C + +A KK R
Sbjct: 18 YVIDQARAPIQFVASKKDFSYCAERLRSAQLMGLDTETRPTWGKTRGPNPCALLQIAVRDASHTEEVFILD---LRRLPATVYNSTLTSVFLSKKIIKLGQSFLQDLKELAQSYPQASCFTVCKGVVEVNDLSIALAG-AHNPLSLQKLVFFYLHRKLAKTQQMSNWERRPLTASQLHYAAADALVLIHLYDELLMRISKKQQGFELSEVTNVLDINLPRTPKCSLCFEVFDTAAELKKHR 254
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: W4GPC3_9STRA (3'-5' exonuclease domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GPC3_9STRA) HSP 1 Score: 150 bits (378), Expect = 2.460e-38 Identity = 90/228 (39.47%), Postives = 125/228 (54.82%), Query Frame = 0
Query: 65 VTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAF 292
V ++ P+ L + L + ++ LDTET+P F S P+ T+LLQ+A R G E VFL DLLAL P D L F++ ILK+G GL+ D++EL YP + F +M GV+E NA+ ++L+ M+SL+KLV + L L K Q SNW RPL+ Q+ YAA DALVL+ + D M I + P F + D+D P C C + S AF
Sbjct: 57 VQFINKPSQLPSCQARLLAAVVVGLDTETKPEFRKTSTPNATSLLQVAVRDVHGREDVFLFDLLALSP---SHYDHMLADLFQNPAILKLGQGLLNDLKELTGAYPSASCFTKMQGVVEVNALFRELEGPTQPMMSLQKLVYYSLKRKLVKTHQKSNWNRRPLAPGQVTYAALDALVLMWIFDDMCARICQLRPAFTAAGIATDLDVLVPERYVCPTCRSVFKSDHAF 281
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A024TW10_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW10_9STRA) HSP 1 Score: 149 bits (377), Expect = 3.550e-38 Identity = 90/228 (39.47%), Postives = 126/228 (55.26%), Query Frame = 0
Query: 65 VTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAF 292
V + TP+ L LR + ++ LDTET+P F + P+ T+LLQ+A R A G E VFL DLLAL P + L F + ILK+G GL+ D++EL YP F +M+GV+E NA+ ++++ M+SL+KLV + L L K Q SNW RPL+ QI YAA DALVL+ + D MV I ++ P F + +D + C C + S AF
Sbjct: 56 VQFLHTPSQLAACHERLRTAVVVGLDTETKPEFKKTAIPNPTSLLQVAVRDAHGAEDVFLFDLLALTP---SHYNDMLAELFLNPSILKLGQGLLNDLKELAHAYPTATCFTKMHGVVEVNALFREIEGPTQPMMSLQKLVYYSLKRKLVKTHQKSNWNRRPLAPGQITYAALDALVLVWIFDDMVARICQKRPTFKAAVIATTLDVHVADNYVCPTCKAVFTSDHAF 280
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A418BAW1_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BAW1_9STRA) HSP 1 Score: 149 bits (377), Expect = 8.210e-37 Identity = 90/228 (39.47%), Postives = 126/228 (55.26%), Query Frame = 0
Query: 65 VTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAF 292
V + TP+ L LR + ++ LDTET+P F + P+ T+LLQ+A R A G E VFL DLLAL P + L F + ILK+G GL+ D++EL YP F +M+GV+E NA+ ++++ M+SL+KLV + L L K Q SNW RPL+ QI YAA DALVL+ + D MV I ++ P F + +D + C C + S AF
Sbjct: 19 VQFLHTPSQLAACHERLRTAIVVGLDTETKPEFKKTAIPNPTSLLQVAVRDAHGAEDVFLFDLLALTP---SHYNDMLAELFLNPSILKLGQGLLNDLKELAHAYPTATCFTKMHGVVEVNALFREIEGPTQPMMSLQKLVYYSLKRKLVKTHQKSNWNRRPLAPGQITYAALDALVLVWIFDDMVARICQKRPTFKAAVIATTLDVHVADNYVCPTCKAVFTSDHAF 243
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: W2R8I8_PHYPN (3'-5' exonuclease domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2R8I8_PHYPN) HSP 1 Score: 142 bits (358), Expect = 1.340e-35 Identity = 91/244 (37.30%), Postives = 137/244 (56.15%), Query Frame = 0
Query: 56 YVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQL-DPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEE--CPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAFKKVR 296
YV+D + V + + + L + +I DTET+P ++ P+ +ALLQIA R A E VF++D LL L A+ ++ L F S+ I+K+G D++EL YPQ + F GV+E N + L P N LSL+KLV YL+ L+K QQMSNWA RPL+SSQ+HYAA DALVL+ L+D +++ + ++ +F + + +D P A +C +C + + KK R
Sbjct: 30 YVIDQSRVPIYFVASKKEWSYCATRLLKAEVIGFDTETRPIWSKHQRPNPSALLQIAVRDASHKEEVFILD---LLHLSAKVYNTTLKRVFLSKTIVKLGQSFYHDLQELAQSYPQASCFTVCKGVVEVNDLSISLAGPH--NPLSLQKLVFFYLHRKLTKTQQMSNWARRPLTSSQLHYAAADALVLIHLYDELLMRMQKQRTTKNFQLSIVTNVLDVNLPPAPKCSRCFDVFETRDKLKKHR 268 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|353236|estExt_Genemark1.C_Ctg_1510044 ID=Trimin1|353236|estExt_Genemark1.C_Ctg_1510044|Name=jgi.p|Trimin1|353236|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=301bpback to top |