mRNA_15185 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A835ZAR5_9STRA (Ribonuclease H-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAR5_9STRA) HSP 1 Score: 613 bits (1581), Expect = 5.720e-222 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 2
Query: 11 MEWQPEASGMPQGLGHYDQHGASDYQHTHQEGGGFVQHSQWQYHTPDQETATAMPYVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAFKKVRCHHAF 913
MEWQPEASGMPQGLGHYDQHGASDYQHTHQEGGGFVQHSQWQYHTPDQETATAMPYVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAFKKVRCHHAF
Sbjct: 1 MEWQPEASGMPQGLGHYDQHGASDYQHTHQEGGGFVQHSQWQYHTPDQETATAMPYVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAFKKVRCHHAF 301
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A482SJB0_9ARCH (3'-5' exonuclease domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJB0_9ARCH) HSP 1 Score: 157 bits (397), Expect = 1.430e-42 Identity = 89/235 (37.87%), Postives = 136/235 (57.87%), Query Frame = 2
Query: 149 DQETATAMPYVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSP------PHRTALLQIASRAADGTEAVFLIDLLALLPL-CAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEEC----PDFNIDDLLQDID 820
+ E +P+ D+P + V+ +LQ D I+ +DTET+P F R+ P+ T+L+Q+A R++ G E+V ++D+L L +D L + +KVG L+ D +EL M Y + +F++++ +L+ + K L PE++N LSLK LV YL+ L KGQQMS+W+ RPL +QI YAACDALVLLRL+D+MV E E+ +FN+ D L+ D
Sbjct: 5 EDEDDRMLPFTFDLPQSSLHFVNDVESLQRLRIAFADCVIVGIDTETRPMFVKRNRANQFVRPNPTSLVQMALRSSSGLESVHIVDMLTLKTQGLLNELDMVLVTVMCDDHCIKVGQSLINDFKELRMSYAHMQSFQKVHAILDTTVLSKVLQPELINTLSLKTLVKQYLHFQLVKGQQMSDWSRRPLGKAQIQYAACDALVLLRLYDAMVCEAEEKALKQTSEFNVRDHLEVFD 239
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A7S3H5J0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5J0_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.720e-42 Identity = 94/208 (45.19%), Postives = 128/208 (61.54%), Query Frame = 2
Query: 176 YVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSP----PHRTALLQIASRAADGTEAVFLIDLL------ALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEI 769
+V D+PS + MV T +Q + L +++I +DTET+P F P++ P+ TAL+QIA R E VF++D++ LL L +D AL K+G GL D+REL YP V AFR + VLE + + K L P + N +SLK LV +L+ +LSK QQMSNWA RPL+SSQ+HYAACDALVLLRL+D++ EI
Sbjct: 44 FVFDLPSTSLIMVTTEEDIQRMKTSLMKATLIGIDTETKPTFVPKAQLVGGPNLTALIQIAVRCPKSIEEVFVVDMIHISRNSRLLIL----LDYALQQGLLENQCFKLGQGLTNDLRELAKSYPTVKAFRLTSCVLETHDLIKYLKPVLTNPISLKNLVKEFLHLNLSKSQQMSNWAKRPLTSSQLHYAACDALVLLRLYDAIYCEI 247
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A7S2GX10_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GX10_9STRA) HSP 1 Score: 150 bits (380), Expect = 3.190e-40 Identity = 101/256 (39.45%), Postives = 140/256 (54.69%), Query Frame = 2
Query: 164 TAMPYVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNF------------------------TPRSPPHRT-------ALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNA 838
T++ +VLDIP D++ V + A +LR ++II +DTETQP F T RSP + ALLQIA R A G E V L D L LLP + + L FRS ++LK+GHGL QD+ EL+ YP + F+ + VLE + + K + P M SL+ +VL +L+ +L+K QQ SNW +RPLS Q+ YAACDALVLLRL+D++ EI + +F++ L D P A
Sbjct: 18 TSLTFVLDIPDDRLIYVQNGDGIIQAEEILRTATIIGIDTETQPTFYKYGARNARRKSEGSSAGEKGGEKTSRSPGKKQKFPRNPCALLQIAVRDAAGLETVLLFDTLRLLPGFETELSTILGRVFRSHEVLKLGHGLKQDLFELHASYP-LKGFKALENVLEVDDLSKVVWPGD-QMRSLQVMVLRFLDSALNKKQQCSNWGHRPLSLKQMEYAACDALVLLRLYDAIRAEIGDRDANFDLRALRLDFAVREPEA 271
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A2D4BG54_PYTIN (3'-5' exonuclease domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG54_PYTIN) HSP 1 Score: 150 bits (379), Expect = 1.370e-39 Identity = 91/241 (37.76%), Postives = 131/241 (54.36%), Query Frame = 2
Query: 176 YVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAFKKVR 898
Y ++ P + V VD + + R ++I+ +DTET+P F + HR +LLQIA R D E VF++DLL L P + L F S+ ++K+G L+ D++EL YP + FR V+E N M L LSL+KLV YL L+K QQMSNW RPL++SQIHYAACDALVL+ L+D ++ + P FN+D + +D +C C + + K+ R
Sbjct: 19 YTIERPEELVKFVDDKETMHYFSERARLATIVGIDTETRPQFRDKHRSHRCSLLQIALRLRDTKEEVFILDLLKLKP---HMYNKTLLGLFLSQSVIKLGQSLLGDLKELASSYPGASCFRVAKAVVEVNDMSISLMG-AHQALSLQKLVFLYLGKRLTKTQQMSNWNRRPLTTSQIHYAACDALVLIHLYDVLLERLKANKPHFNVDSISNVLDVHIDLPPKCQLCFEYFDNKRGLKEHR 255
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: G4ZEW8_PHYSP (3'-5' exonuclease domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZEW8_PHYSP) HSP 1 Score: 150 bits (378), Expect = 1.110e-38 Identity = 92/241 (38.17%), Postives = 134/241 (55.60%), Query Frame = 2
Query: 176 YVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAFKKVR 898
YV+D + V + + LR + ++ LDTET+P + P+ ALLQIA R A TE VF++D L L A +S L F S+ I+K+G +QD++EL YPQ + F GV+E N + L N LSL+KLV YL+ L+K QQMSNW RPL++SQ+HYAA DALVL+ L+D +++ I ++ F + ++ +D P +C C + +A KK R
Sbjct: 18 YVIDQARAPIQFVASKKDFSYCAERLRSAQLMGLDTETRPTWGKTRGPNPCALLQIAVRDASHTEEVFILD---LRRLPATVYNSTLTSVFLSKKIIKLGQSFLQDLKELAQSYPQASCFTVCKGVVEVNDLSIALAG-AHNPLSLQKLVFFYLHRKLAKTQQMSNWERRPLTASQLHYAAADALVLIHLYDELLMRISKKQQGFELSEVTNVLDINLPRTPKCSLCFEVFDTAAELKKHR 254
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: W4GPC3_9STRA (3'-5' exonuclease domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GPC3_9STRA) HSP 1 Score: 150 bits (378), Expect = 2.680e-38 Identity = 90/228 (39.47%), Postives = 125/228 (54.82%), Query Frame = 2
Query: 203 VTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAF 886
V ++ P+ L + L + ++ LDTET+P F S P+ T+LLQ+A R G E VFL DLLAL P D L F++ ILK+G GL+ D++EL YP + F +M GV+E NA+ ++L+ M+SL+KLV + L L K Q SNW RPL+ Q+ YAA DALVL+ + D M I + P F + D+D P C C + S AF
Sbjct: 57 VQFINKPSQLPSCQARLLAAVVVGLDTETKPEFRKTSTPNATSLLQVAVRDVHGREDVFLFDLLALSP---SHYDHMLADLFQNPAILKLGQGLLNDLKELTGAYPSASCFTKMQGVVEVNALFRELEGPTQPMMSLQKLVYYSLKRKLVKTHQKSNWNRRPLAPGQVTYAALDALVLMWIFDDMCARICQLRPAFTAAGIATDLDVLVPERYVCPTCRSVFKSDHAF 281
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A024TW10_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW10_9STRA) HSP 1 Score: 149 bits (377), Expect = 3.860e-38 Identity = 90/228 (39.47%), Postives = 126/228 (55.26%), Query Frame = 2
Query: 203 VTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAF 886
V + TP+ L LR + ++ LDTET+P F + P+ T+LLQ+A R A G E VFL DLLAL P + L F + ILK+G GL+ D++EL YP F +M+GV+E NA+ ++++ M+SL+KLV + L L K Q SNW RPL+ QI YAA DALVL+ + D MV I ++ P F + +D + C C + S AF
Sbjct: 56 VQFLHTPSQLAACHERLRTAVVVGLDTETKPEFKKTAIPNPTSLLQVAVRDAHGAEDVFLFDLLALTP---SHYNDMLAELFLNPSILKLGQGLLNDLKELAHAYPTATCFTKMHGVVEVNALFREIEGPTQPMMSLQKLVYYSLKRKLVKTHQKSNWNRRPLAPGQITYAALDALVLVWIFDDMVARICQKRPTFKAAVIATTLDVHVADNYVCPTCKAVFTSDHAF 280
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A418BAW1_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BAW1_9STRA) HSP 1 Score: 149 bits (377), Expect = 8.940e-37 Identity = 90/228 (39.47%), Postives = 126/228 (55.26%), Query Frame = 2
Query: 203 VTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEECPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAF 886
V + TP+ L LR + ++ LDTET+P F + P+ T+LLQ+A R A G E VFL DLLAL P + L F + ILK+G GL+ D++EL YP F +M+GV+E NA+ ++++ M+SL+KLV + L L K Q SNW RPL+ QI YAA DALVL+ + D MV I ++ P F + +D + C C + S AF
Sbjct: 19 VQFLHTPSQLAACHERLRTAIVVGLDTETKPEFKKTAIPNPTSLLQVAVRDAHGAEDVFLFDLLALTP---SHYNDMLAELFLNPSILKLGQGLLNDLKELAHAYPTATCFTKMHGVVEVNALFREIEGPTQPMMSLQKLVYYSLKRKLVKTHQKSNWNRRPLAPGQITYAALDALVLVWIFDDMVARICQKRPTFKAAVIATTLDVHVADNYVCPTCKAVFTSDHAF 243
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: W2R8I8_PHYPN (3'-5' exonuclease domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2R8I8_PHYPN) HSP 1 Score: 142 bits (358), Expect = 1.450e-35 Identity = 91/244 (37.30%), Postives = 137/244 (56.15%), Query Frame = 2
Query: 176 YVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLALLPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQL-DPEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFEE--CPDFNIDDLLQDIDGPNPNAVECWQCGLILASAKAFKKVR 898
YV+D + V + + + L + +I DTET+P ++ P+ +ALLQIA R A E VF++D LL L A+ ++ L F S+ I+K+G D++EL YPQ + F GV+E N + L P N LSL+KLV YL+ L+K QQMSNWA RPL+SSQ+HYAA DALVL+ L+D +++ + ++ +F + + +D P A +C +C + + KK R
Sbjct: 30 YVIDQSRVPIYFVASKKEWSYCATRLLKAEVIGFDTETRPIWSKHQRPNPSALLQIAVRDASHKEEVFILD---LLHLSAKVYNTTLKRVFLSKTIVKLGQSFYHDLQELAQSYPQASCFTVCKGVVEVNDLSISLAGPH--NPLSLQKLVFFYLHRKLTKTQQMSNWARRPLTSSQLHYAAADALVLIHLYDELLMRMQKQRTTKNFQLSIVTNVLDVNLPPAPKCSRCFDVFETRDKLKKHR 268
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A835ZAB9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAB9_9STRA) HSP 1 Score: 1444 bits (3739), Expect = 0.000e+0 Identity = 1369/1369 (100.00%), Postives = 1369/1369 (100.00%), Query Frame = 1
Query: 1 MAGDAELRPALSCLAGVILLTRLAQAAASQQQPSPAAPRGGLFRVLRDSFADPELPLHPTWDAWHVAKHLGTEEPVEEVKVDATLLSEEAAAPEPVAVEAKVKADVVDVSAGPVLKLQLVADEEARANKTQEPVDEVGDDTALLFEEAAELAAADVEAAVHEEASTGDVLPVQLVAEEAQRAEAAMEPASGEVDVALLLEESSVDHALVEMTLAVETEAEVVEVEAVAEVSAGPVLPLPALQLVAEVAQQAEAAEETVTGMVLPENKQHMAVVPAGYFDRKKEEMCGIQDAPSLELLIGMSPAIESFAQQVARMHRAGEARRANRTANDYDVSTVCIALALASRILRTLRDRRRRTMRQKELMRTLEANTATEXXXXXXXXARYRPHHPHAKFALGGIARPPAATLKPTLTSKLYTTLNFKSALRKATGLAASEARCEALQQELAAMAADACDIRAAAAXXXXXXXXXXXXXXXXXXXXXXXXXQRLAKSVRLAAASQVAMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAERIQALETXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVVAEGELAQVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSKCAALLNERDAAVAQAXXXXXXXXXXXXXXXXXXXXTAAAARVQVSELEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIELDXXXXXXXXXXXXXXXXXXXXXXXXXXXVERSAAAAADVVMEKYKEIMKCLRGTMEDAQARFQELVLEAEGARDAAQLERDEAVAIMESMKATVAEAEGAMRTAAELTAARDALQLQVVTLTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAVTGSTAQPSDGSAERRCNEMQARLRKCQDEALEVRKALGEKARELRAQAKMIKELEGMRGELEATVEALQGAVQGXXXXXXXXXXXXXXXXXXXXXLSEAAHDPEGAFAALSQELQQSSARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTSQVLKAHETIASLKIDNKVLKNGNSALLAKAIALEARLGCLEPPSATAVSSRPRKGRSASPHRTRFLSGDPVATTHRYPQEGESPVEVKQDAIDDVLTIATAXXXXXXXXEGVVEGDKSSNERVTLAAEQRDGKHSISSAQSNPPPPTVTEPKPTELQALATPLIDGGGGNSGSSVQSGA 4107
MAGDAELRPALSCLAGVILLTRLAQAAASQQQPSPAAPRGGLFRVLRDSFADPELPLHPTWDAWHVAKHLGTEEPVEEVKVDATLLSEEAAAPEPVAVEAKVKADVVDVSAGPVLKLQLVADEEARANKTQEPVDEVGDDTALLFEEAAELAAADVEAAVHEEASTGDVLPVQLVAEEAQRAEAAMEPASGEVDVALLLEESSVDHALVEMTLAVETEAEVVEVEAVAEVSAGPVLPLPALQLVAEVAQQAEAAEETVTGMVLPENKQHMAVVPAGYFDRKKEEMCGIQDAPSLELLIGMSPAIESFAQQVARMHRAGEARRANRTANDYDVSTVCIALALASRILRTLRDRRRRTMRQKELMRTLEANTATEXXXXXXXXARYRPHHPHAKFALGGIARPPAATLKPTLTSKLYTTLNFKSALRKATGLAASEARCEALQQELAAMAADACDIRAAAAXXXXXXXXXXXXXXXXXXXXXXXXXQRLAKSVRLAAASQVAMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAERIQALETXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVVAEGELAQVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSKCAALLNERDAAVAQAXXXXXXXXXXXXXXXXXXXXTAAAARVQVSELEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIELDXXXXXXXXXXXXXXXXXXXXXXXXXXXVERSAAAAADVVMEKYKEIMKCLRGTMEDAQARFQELVLEAEGARDAAQLERDEAVAIMESMKATVAEAEGAMRTAAELTAARDALQLQVVTLTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAVTGSTAQPSDGSAERRCNEMQARLRKCQDEALEVRKALGEKARELRAQAKMIKELEGMRGELEATVEALQGAVQGXXXXXXXXXXXXXXXXXXXXXLSEAAHDPEGAFAALSQELQQSSARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTSQVLKAHETIASLKIDNKVLKNGNSALLAKAIALEARLGCLEPPSATAVSSRPRKGRSASPHRTRFLSGDPVATTHRYPQEGESPVEVKQDAIDDVLTIATAXXXXXXXXEGVVEGDKSSNERVTLAAEQRDGKHSISSAQSNPPPPTVTEPKPTELQALATPLIDGGGGNSGSSVQSGA
Sbjct: 1 MAGDAELRPALSCLAGVILLTRLAQAAASQQQPSPAAPRGGLFRVLRDSFADPELPLHPTWDAWHVAKHLGTEEPVEEVKVDATLLSEEAAAPEPVAVEAKVKADVVDVSAGPVLKLQLVADEEARANKTQEPVDEVGDDTALLFEEAAELAAADVEAAVHEEASTGDVLPVQLVAEEAQRAEAAMEPASGEVDVALLLEESSVDHALVEMTLAVETEAEVVEVEAVAEVSAGPVLPLPALQLVAEVAQQAEAAEETVTGMVLPENKQHMAVVPAGYFDRKKEEMCGIQDAPSLELLIGMSPAIESFAQQVARMHRAGEARRANRTANDYDVSTVCIALALASRILRTLRDRRRRTMRQKELMRTLEANTATEXXXXXXXXARYRPHHPHAKFALGGIARPPAATLKPTLTSKLYTTLNFKSALRKATGLAASEARCEALQQELAAMAADACDIRAAAAXXXXXXXXXXXXXXXXXXXXXXXXXQRLAKSVRLAAASQVAMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAERIQALETXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVVAEGELAQVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSKCAALLNERDAAVAQAXXXXXXXXXXXXXXXXXXXXTAAAARVQVSELEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIELDXXXXXXXXXXXXXXXXXXXXXXXXXXXVERSAAAAADVVMEKYKEIMKCLRGTMEDAQARFQELVLEAEGARDAAQLERDEAVAIMESMKATVAEAEGAMRTAAELTAARDALQLQVVTLTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAVTGSTAQPSDGSAERRCNEMQARLRKCQDEALEVRKALGEKARELRAQAKMIKELEGMRGELEATVEALQGAVQGXXXXXXXXXXXXXXXXXXXXXLSEAAHDPEGAFAALSQELQQSSARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTSQVLKAHETIASLKIDNKVLKNGNSALLAKAIALEARLGCLEPPSATAVSSRPRKGRSASPHRTRFLSGDPVATTHRYPQEGESPVEVKQDAIDDVLTIATAXXXXXXXXEGVVEGDKSSNERVTLAAEQRDGKHSISSAQSNPPPPTVTEPKPTELQALATPLIDGGGGNSGSSVQSGA 1369
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Match: A0A836CNK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNK4_9STRA) HSP 1 Score: 875 bits (2261), Expect = 1.840e-292 Identity = 1003/1479 (67.82%), Postives = 1052/1479 (71.13%), Query Frame = 1
Query: 1 MAGDAELRPALSCLAGVILLTRLAQAAASQQQPSPAAPRGGLFRVLRDSFADPELPLHPTWDAWHVAKHLGTEEPVEEVKVDATLLSEEAAAPEPVAVEAKVKADVVDVSAGPVLKLQLVADEEARANKTQEPVDEVGDDTALLFEEAAELAAADVEAAVHEEASTGDVLPVQLVAEEAQRAEAAMEPASGEVDVALLLEESSVDHAL---------------VEMTLAVETEAEV---------------------------VEVEAVAEVSAGPVLPLPALQLVAEVAQQAEAAEETVTGMVLPENKQHMAVVPAGYFDRKKEEMCGIQDAPSLELLIGMSPAIESFAQQVARMHRAGEARRANRTANDYDVSTVCIALALASRILRTLRDRRRRTMRQKELMRTLEANTATEXXXXXXXXARYRPHHPHAKFALGGIARPPAATLKPTLTSKLYTTLNF------KSALRKATGLAASEARCEALQQELAAMAADACDIRAAAAXXXXXXXXXXXXXXXXXXXXXXXXXQRLAKSVRLAAASQVAMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAERIQALETXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVVAEGELAQVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSKCAALLNERDAAVAQAXXXXXXXXXXXXXXXXXXXXTAAAARVQVSELEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEL---------DXXXXXXXXXXXXXXXXXXXXXXXXXXXVERSAAAAADVVMEKYKEIMKCLRGTMEDAQARFQELVLEAEGARDAAQLERDEAVAIMESMKATVAEAEGAMRTAAELTAARDALQLQVVTLTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------AAA----------------VTGSTAQPSDGSAERRCNEMQARLRKCQDEALEVRKALGEKARELRAQAKMIKELEGMRGELEATVEALQGAVQGXXXXXXXXXXXXXXXXXXXXXLSEAAHDPEGAFAALSQELQQSSARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTSQVLKAHETIASLKIDNKVLKNGNSALLAKAIALEARLGCLEPPSATA-VSSRPRKGRSASPHRTRFLSGDPVATTHRYPQEGESPVEV--KQDAIDDVLTIATAXXXXXXXXEGVVEG--------DKSSNERVTLAAEQRDGKHSISSAQSNPPPPTVTEPKPTELQALATPLIDGGGGNSGSSVQSGA 4107
MAGDAELRPALSCLAGVILLT+LAQAAA QQQP AAPRGGLFRVLRDSFADPELPLHPTWDAWHVAKHLGTEEPV+EVKVDATLLSEEAAAPEPVAVE +V+AD + AGPVL LQLVA+EEARA++ EPV+EV D LL EEA ELA ADVE EEASTGDVLPVQLVAEEAQRA+ A EP +G VDVALLL E +V L + + L + EA V+VE V E+SA VLP+P L E + EAAE TV G+VLP+ KQ MA+VP ++KKEEMCG+QDA SLELLIGM PAIESFAQQ YDVSTVCIALALASRILRTLRDRRRRTMRQKELMR LEANTATE XXXXX ARY PHHPH KFALGGIARPPAATLKPTLTSKLYTTLNF KSALRKATGLAASEARCEALQ++LAAMAA A XXXXXXXXXXXXXXXXXXXXXXX QRLA SVRL AASQVAMV XXXXXXXXXXXXXXXXXXXXX RIQALE XXXXXXXXXXXXXXXXXXXXXXXXXXXXD AE E A+VKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DSKCAALL ERDAA+AQ XXXXXXXX AA RV+ +LEA XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DX XXXXXXXX XXXXX VERS AAA DV++EKYKE +KCLRGTMEDA+ARFQE V EAE ARDAAQLERDEAVA MESMK TVAEAEGAMRT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAA VTG TAQPSDGSAERRCNEMQARLRKCQDEALEVRKALGEKARELR+QAKMIKELEGMRGELEATVEALQGAVQGXXXXXXXXXXXXXXXXXXXXX HDPEGAFA+LS ELQQ SAR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RLTSQVLKAHETIASLKI+NKVLKNGNSAL+AKAIALEARLGCLEPPSATA VSSRPRKGRSASPHRTRFLSGDPVATTH YPQEGESP+++ K D D IATA XXXXXXX DK++N+RVTLAAEQ + K+SISSAQSNPP EPKP+ELQ LATPL +G SGSSVQSGA
Sbjct: 1 MAGDAELRPALSCLAGVILLTKLAQAAARQQQP--AAPRGGLFRVLRDSFADPELPLHPTWDAWHVAKHLGTEEPVKEVKVDATLLSEEAAAPEPVAVEVEVEADE-EAIAGPVLPLQLVAEEEARADEAMEPVEEVAVDATLLCEEATELAVADVEVEADEEASTGDVLPVQLVAEEAQRADEAKEPFAGVVDVALLLSEKTVGELLAVKVDAGMEVSAVPALPLQLVADGEARAGEAMEPVAGVVEVALLLPEQIVDERLTVKVEPVMELSAASVLPVP---LATEEELRVEAAEATVRGIVLPDTKQQMAMVP----EQKKEEMCGLQDAASLELLIGMPPAIESFAQQ-------------------YDVSTVCIALALASRILRTLRDRRRRTMRQKELMRALEANTATESXXXXXEEARYPPHHPHVKFALGGIARPPAATLKPTLTSKLYTTLNFNMTIIFKSALRKATGLAASEARCEALQRQLAAMAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQRLATSVRLTAASQVAMVAATVAKEXXXXXXXXXXXXXXXXXXXXXA----RIQALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLASAEDEPARVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------DSKCAALLGERDAALAQVAAAEIHNAQQAEXXXXXXXXXXAAERVRFGKLEAALTAAAAEAVSAKQGAAXXXXXXXXXXXXXXXXXXXKAEADDVIAGLRDQLVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXTVRDXXXXXXXXADAVTRAEXXXXXEVERSGAAA-DVMIEKYKEFVKCLRGTMEDAEARFQERVAEAESARDAAQLERDEAVATMESMKTTVAEAEGAMRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAAAAAXXXXXXXXXXXXXXXXVTGVTAQPSDGSAERRCNEMQARLRKCQDEALEVRKALGEKARELRSQAKMIKELEGMRGELEATVEALQGAVQGXXXXXXXXXXXXXXXXXXXXXXXXXXHDPEGAFASLSNELQQCSARVRELKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKAMEARLTSQVLKAHETIASLKINNKVLKNGNSALIAKAIALEARLGCLEPPSATAAVSSRPRKGRSASPHRTRFLSGDPVATTHWYPQEGESPIDLNLKHDTTDGESAIATAAXXXXXXXXXXXXXXXXXXXXXDKNANKRVTLAAEQTEDKYSISSAQSNPPXXXXXEPKPSELQVLATPLTNGXXXXSGSSVQSGA 1391 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353236 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|353236 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15185 ID=mRNA_15185|Name=jgi.p|Trimin1|353236|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=914bp|location=Sequence derived from alignment at Contig_151:351272..358030+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGCAGTTCCCATGGAGTGGCAGCCGGAGGCGAGCGGCATGCCGCAGGGTCback to top protein sequence of jgi.p|Trimin1|353236 >Trimin1|353236|estExt_Genemark1.C_Ctg_1510044 ID=Trimin1|353236|estExt_Genemark1.C_Ctg_1510044|Name=jgi.p|Trimin1|353236|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=301bp MEWQPEASGMPQGLGHYDQHGASDYQHTHQEGGGFVQHSQWQYHTPDQETback to top mRNA from alignment at Contig_151:351272..358030+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15185 ID=mRNA_15185|Name=jgi.p|Trimin1|353236|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6759bp|location=Sequence derived from alignment at Contig_151:351272..358030+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_151:351272..358030+ >mRNA_15185 ID=mRNA_15185|Name=jgi.p|Trimin1|353236|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=903bp|location=Sequence derived from alignment at Contig_151:351272..358030+ (Tribonema minus UTEX_B_3156 )back to top |