mRNA_15160 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|136668 vs. uniprot
Match: A0A835Z862_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z862_9STRA) HSP 1 Score: 284 bits (727), Expect = 3.880e-97 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1 Query: 1 PVSQGGFGVVPWGGASQFIDPTATWLWTQTNARFSAPAGTVDFSTLITNSSQQDKQALIHMLVDNDADVFLNDAKVGSGSMGFSVREYAKIPIALPWGTSTLRFRCVNSGTGPAGLLVAVVDAASGVTIVKSDPSSWVFNV 423 PVSQGGFGVVPWGGASQFIDPTATWLWTQTNARFSAPAGTVDFSTLITNSSQQDKQALIHMLVDNDADVFLNDAKVGSGSMGFSVREYAKIPIALPWGTSTLRFRCVNSGTGPAGLLVAVVDAASGVTIVKSDPSSWVFNV Sbjct: 1 PVSQGGFGVVPWGGASQFIDPTATWLWTQTNARFSAPAGTVDFSTLITNSSQQDKQALIHMLVDNDADVFLNDAKVGSGSMGFSVREYAKIPIALPWGTSTLRFRCVNSGTGPAGLLVAVVDAASGVTIVKSDPSSWVFNV 141
BLAST of jgi.p|Trimin1|136668 vs. uniprot
Match: A0A835ZCJ5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCJ5_9STRA) HSP 1 Score: 223 bits (568), Expect = 6.580e-73 Identity = 101/140 (72.14%), Postives = 125/140 (89.29%), Query Frame = 1 Query: 1 PVSQGGFGVVPWGGASQFIDPTATWLWTQTNARFSAPAGTVDFSTLITNSSQQDKQALIHMLVDNDADVFLNDAKVGSGSMGFSVREYAKIPIALPWGTSTLRFRCVNSGTGPAGLLVAVVDAASGVTIVKSDPSSWVFN 420 PV+QGG+G +PWGGA++FI+P+A WLWTQ NARFSAP T+DFSTLITNSSQ D+QA+IH+LVDNDA ++LND KVGS SMGFS ++Y K+P+++PWGTSTLR R +N+G GPAGL+VAVVDAASG T+VK+DPSSWVFN Sbjct: 1 PVNQGGYGAIPWGGAAKFIEPSAMWLWTQNNARFSAPPATIDFSTLITNSSQDDQQAVIHILVDNDAVIYLNDIKVGSASMGFSNQDYNKLPVSIPWGTSTLRIRAMNTGQGPAGLIVAVVDAASGTTLVKTDPSSWVFN 140
BLAST of jgi.p|Trimin1|136668 vs. uniprot
Match: A0A836CLV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLV6_9STRA) HSP 1 Score: 159 bits (402), Expect = 5.270e-47 Identity = 71/139 (51.08%), Postives = 98/139 (70.50%), Query Frame = 1 Query: 4 VSQGGFGVVPWGGASQFIDPTATWLWTQTNARFSAPAGTVDFSTLITNSSQQDKQALIHMLVDNDADVFLNDAKVGSGSMGFSVREYAKIPIALPWGTSTLRFRCVNSGTGPAGLLVAVVDAASGVTIVKSDPSSWVFN 420 V QGGFG VPWG ASQF D TA W+WT NARFSAP G+ +F+ + S A++H+LVDNDAD++LN KVGS S+GFS R+Y++IP+ L WG + + RC N+G GPAG+ +++D S ++K++ S WV+N Sbjct: 47 VDQGGFGTVPWGSASQFEDKTAKWIWTSPNARFSAPVGSYNFAAQLKIMSVTPVTAMLHILVDNDADIYLNGEKVGSASLGFSARDYSRIPLTLVWGVNDIVLRCTNTGVGPAGVCASLIDDVSKTPLLKTEGSRWVYN 185
BLAST of jgi.p|Trimin1|136668 vs. uniprot
Match: A0A836CJ77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ77_9STRA) HSP 1 Score: 155 bits (393), Expect = 4.740e-46 Identity = 72/139 (51.80%), Postives = 95/139 (68.35%), Query Frame = 1 Query: 4 VSQGGFGVVPWGGASQFIDPTATWLWTQTNARFSAPAGTVDFSTLITNSSQQDKQALIHMLVDNDADVFLNDAKVGSGSMGFSVREYAKIPIALPWGTSTLRFRCVNSGTGPAGLLVAVVDAASGVTIVKSDPSSWVFN 420 V QGGFG+VPWG AS F D TA W+WT NARFSA GT DF+ S A +H+LVDNDADVFLN +KVGS S+GFS ++YA+IP+ L WG + + C N+G GPAG+ +++D AS ++ ++ S WV+N Sbjct: 15 VDQGGFGIVPWGAASNFEDKTAKWIWTSPNARFSAAVGTYDFAAQYKIMSTTPVTATLHILVDNDADVFLNGSKVGSASLGFSAQDYARIPMTLVWGVNDIVLHCTNTGVGPAGVCASLIDDASKTPLLHTEGSRWVYN 153
BLAST of jgi.p|Trimin1|136668 vs. uniprot
Match: A0A4P9WNY3_9FUNG (Uncharacterized protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WNY3_9FUNG) HSP 1 Score: 101 bits (252), Expect = 3.110e-23 Identity = 51/131 (38.93%), Postives = 79/131 (60.31%), Query Frame = 1 Query: 19 FGVVPWGGASQFIDPTATWLWTQTNARFSAPAGTVDFSTLITNSSQQDKQALIHMLVDNDADVFLNDAKVGSGSMGFSVREYAKIPIALPWGTSTLRFRCVNSGTGPAGLLVAVVDAASGVTIVKSDPSSW 411 FG+ PWG ASQF DPTA+W+W + A +AP+G+V F NSS A++H+L D+ A VF+N A VG G+S Y KIP+ L G + + N+ +GPAGL +++ + + ++ +D ++W Sbjct: 182 FGISPWGSASQFADPTASWIWYTSTAAATAPSGSVTFVNQYYNSSYNTMPAILHILADDSATVFVNGANVGVAVAGWSTTSYTKIPVNLTPGANLISIVDTNA-SGPAGLCASLISSVTNSVLLHTD-TTW 310
BLAST of jgi.p|Trimin1|136668 vs. uniprot
Match: A0A836C184_9CHLO (DUF3707 domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C184_9CHLO) HSP 1 Score: 78.6 bits (192), Expect = 3.230e-14 Identity = 54/141 (38.30%), Postives = 76/141 (53.90%), Query Frame = 1 Query: 13 GGFGVVPWGGASQFIDPTATWLWTQTNARFSAPAGTVD-FSTLITNSSQQDKQALIHMLVDNDADVFLNDAKVGSGSMGFSVREYAKIPIALPWGTSTLRFRCVNSGTG-----PAGLLVAVVDAASGVTIVKSDPS-SWV 414 GG PW + F D +A W+WT A AP +V FS +T A +H+ VD+ ADV++N+A VG+ ++IP+ LP G+ST+ R N G PAG+L +VVDA SG +V++D S SWV Sbjct: 365 GGPSTAPWA-LTDFADASARWIWTSPWATTKAPVSSVIVFSKAVTAPGPT--SATLHIAVDSSADVYINNAYVGTALSSKDSVAASQIPVFLPPGSSTISLRATNQWMGWQNQHPAGVLASVVDA-SGAVLVRTDSSWSWV 501
BLAST of jgi.p|Trimin1|136668 vs. uniprot
Match: D8TKU9_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TKU9_VOLCA) HSP 1 Score: 67.0 bits (162), Expect = 5.020e-11 Identity = 48/150 (32.00%), Postives = 72/150 (48.00%), Query Frame = 1 Query: 1 PVSQGGFGVVPWGGASQFIDPTATWLWTQTNARFSAPAGTVD-------FSTLITNSSQQDKQALIHMLVDNDADVFLNDAKVGSGSMGFSVREYAKIPIA--LPWGTSTLRFRCVNSGTGPAGLLVAVVDAASGVTIVKSDPSSWVFNV 423 P +Q +G G A F D +A W+W TN S T F IT S+ QAL+H++ D+DA++++N + S + G++ Y PI L GT+ L NSG GPA LL ++ + G T++ SW N+ Sbjct: 33 PAAQSIYGTDNIGVAKPFFDLSAKWIWYHTNGAGSGSNRTSSGQSIAPLFIKTITVSTAGGTQALLHIIPDDDANIYVNGFFIQSVNAGWTSGTYTNRPITINLVQGTNVLAISIRNSGGGPAALLASLT-SMDGRTVLARTDKSWEVNL 181
BLAST of jgi.p|Trimin1|136668 vs. uniprot
Match: A0A8J4B5N1_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B5N1_9CHLO) HSP 1 Score: 65.5 bits (158), Expect = 1.130e-9 Identity = 43/129 (33.33%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 52 FIDPTATWLWTQTNARFSAPAGTV---DFSTLITNSSQQDKQALIHMLVDNDADVFLNDAKVGSGSMGFSVREYAKIPI--ALPWGTSTLRFRCVNSGTGPAGLLVAVVDAASGVTIVKSDPSSWVFNV 423 F DP A +W N F + A T+ F+T +T + Q QAL+H++VD+ AD+F+N A + + G+ +Y+ PI LP GTS L R N+G GPA + ++ + G + +++ S+W + + Sbjct: 388 FSDPQAMAIWVHEN--FHSSASTLVAATFTTTVTIAGQA-TQALLHVIVDDIADIFVNGAFITTVKWGWVSGQYSDRPIKITLPVGTSALSLRVKNTG-GPASIAAYLISSNGGTVLTRTN-SAWTYTI 511
BLAST of jgi.p|Trimin1|136668 vs. uniprot
Match: A0A8J4EZI9_9CHLO (Uncharacterized protein (Fragment) n=10 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EZI9_9CHLO) HSP 1 Score: 65.5 bits (158), Expect = 1.160e-9 Identity = 43/129 (33.33%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 52 FIDPTATWLWTQTNARFSAPAGTV---DFSTLITNSSQQDKQALIHMLVDNDADVFLNDAKVGSGSMGFSVREYAKIPI--ALPWGTSTLRFRCVNSGTGPAGLLVAVVDAASGVTIVKSDPSSWVFNV 423 F DP A +W N F + A T+ F+T +T + Q QAL+H++VD+ AD+F+N A + + G+ +Y+ PI LP GTS L R N+G GPA + ++ + G + +++ S+W + + Sbjct: 561 FSDPQAMAIWVHEN--FHSSASTLVAATFTTTVTIAGQA-TQALLHVIVDDIADIFVNGAFITTVKWGWVSGQYSDRPIKITLPVGTSALSLRVKNTG-GPASIAAYLISSNGGTVLTRTN-SAWTYTI 684
BLAST of jgi.p|Trimin1|136668 vs. uniprot
Match: A0A8J4FBS2_9CHLO (Peptidase_M11 domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4FBS2_9CHLO) HSP 1 Score: 65.1 bits (157), Expect = 1.670e-9 Identity = 46/130 (35.38%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 37 GGASQFIDPTATWLWTQTNARFSAPAG-TVDFSTLITNSSQQDKQALIHMLVDNDADVFLNDAKVGSGSMGFSVREYAKIPI--ALPWGTSTLRFRCVNSGTGPAGLLVAVVDAASGVTIVKSDPSSWVF 417 G F DP A +W NA SA F+T IT + Q QAL++++VD+ A+V++N A + G+ REY PI LP GTSTL R N+G GPAG+ ++ ++ G +++ +W + Sbjct: 1652 GSNKPFSDPQAMAIWVHENATSSASTLIAATFTTTITITGQA-TQALLYLIVDDIAEVYINGAYITYVERGWLSREYTDRPINITLPVGTSTLSLRVKNTG-GPAGVAAYLI-SSDGSSVLTRTNIAWTY 1778 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|136668 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15160 ID=mRNA_15160|Name=jgi.p|Trimin1|136668|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=423bp|location=Sequence derived from alignment at Contig_151:90291..90713+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CCGGTAAGTCAAGGCGGGTTCGGCGTCGTACCTTGGGGCGGCGCCTCTCAback to top protein sequence of jgi.p|Trimin1|136668 >Trimin1|136668|gw1.151.21.1 ID=Trimin1|136668|gw1.151.21.1|Name=jgi.p|Trimin1|136668|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=141bp PVSQGGFGVVPWGGASQFIDPTATWLWTQTNARFSAPAGTVDFSTLITNSback to top mRNA from alignment at Contig_151:90291..90713+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15160 ID=mRNA_15160|Name=jgi.p|Trimin1|136668|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=423bp|location=Sequence derived from alignment at Contig_151:90291..90713+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_151:90291..90713+ >mRNA_15160 ID=mRNA_15160|Name=jgi.p|Trimin1|136668|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=423bp|location=Sequence derived from alignment at Contig_151:90291..90713+ (Tribonema minus UTEX_B_3156 )back to top |