Trimin1|347777|estExt_Genemark1.C_Ctg_150175 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347777
Unique NameTrimin1|347777|estExt_Genemark1.C_Ctg_150175
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length232
Homology
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A835Z8J8_9STRA (Flagellar associated protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J8_9STRA)

HSP 1 Score: 468 bits (1203), Expect = 9.960e-167
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
Query:    1 MHGIHSLGVLPCIILCARAFSSHTASRTAVKMSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 231
            MHGIHSLGVLPCIILCARAFSSHTASRTAVKMSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK
Sbjct:    1 MHGIHSLGVLPCIILCARAFSSHTASRTAVKMSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 231          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A835YXC5_9STRA (Flagellar associated protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXC5_9STRA)

HSP 1 Score: 230 bits (586), Expect = 2.990e-73
Identity = 115/187 (61.50%), Postives = 135/187 (72.19%), Query Frame = 0
Query:   44 PFCLRQFTDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAII 230
            PFCLRQF D +Y GTKI + P+     +N++       H+GYA FCKH+FM NF G+EG+IV IT ENE LLR+ Y+AR P EL VL R+FPRGSVP P A  LD+ILYS +QIRKE AA  ED  S  P WG+V IKAQ VD E+PMQPITMLRNALGR +GGSGV L+A  Y ESV FWS HA +
Sbjct:   16 PFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAP-WGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 201          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: D7FP80_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP80_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 1.140e-69
Identity = 117/222 (52.70%), Postives = 146/222 (65.77%), Query Frame = 0
Query:   11 PCIILCARAFSSHTASRTAVKMSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNE-YLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 231
            PC +    A S      T   MS    + + +  F +RQFTD +Y GTK+ + P +F  +VNE + A GGKL EGYA FCKH+F+ NFAG++ S V IT ENE LL   YEAR   ELP+L R+F  G+V  P A  LDIILYS EQIRKE AA  ++    E  WGI+ +K+Q VD+EIPMQPITM+RNALG+ EGGSGV L  +KY +SVEFW  HA +K
Sbjct:   30 PCPLGFPAAASRRGYKSTTTAMSAPGGNELVMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVPNFAGVKTSTVKITPENEKLLVAGYEARTAKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 251          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A7S3Y2J4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2J4_HETAK)

HSP 1 Score: 220 bits (560), Expect = 9.250e-69
Identity = 115/205 (56.10%), Postives = 144/205 (70.24%), Query Frame = 0
Query:   28 TAVKMSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNE-YLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 231
            T ++M+++  ++V + PFC+RQFTD  Y GTKI + PDDF  ++N+ + AG   L +GYA FCKHLF+ NFAG+ GSI  IT EN  LL++ YEAR   ELPVL+R+F    VP      LDIILYS EQIRKE  A  ED  S  P WGIV +KAQ ++YEIPMQPITM+RNALG  +GGSGV L+A  Y+ SV FW+ HA IK
Sbjct:   38 TTLRMASSEREIV-IDPFCMRQFTDDAYTGTKINYDPDDFEVKINDLFSAGQAPLVDGYAPFCKHLFVPNFAGVVGSIAAITEENIHLLKSGYEARTEKELPVLVRWFSAEDVPQSETEFLDIILYSREQIRKENEAMGEDSGSDAP-WGIVSVKAQDINYEIPMQPITMMRNALGADQGGSGVTLDADAYAASVAFWTDHATIK 240          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A7S4FA99_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FA99_CHRCT)

HSP 1 Score: 213 bits (541), Expect = 2.000e-66
Identity = 117/201 (58.21%), Postives = 134/201 (66.67%), Query Frame = 0
Query:   32 MSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARV-NEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPA-APTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAII 230
            MS A+     L PFCLRQF D  Y GTK+ H   DF  R+   + AG   L +GYA FCKHLF+ NF       +PIT ENE LLRT Y+AR   ELPVL R+FP  +VPAP  A  LDIILYS EQIRKE  A    D   EP WGI+ +KAQ VDYE+PMQPITM+RNALG+SEGGSGV L  +KY+ESV FW  HA I
Sbjct:    1 MSAASTRKFCLDPFCLRQFDDPKYSGTKVAHDKADFLERIIAAHDAGNAPLVDGYAPFCKHLFVPNFTPATTPYLPITPENEGLLRTAYDARTEQELPVLTRWFPAETVPAPPIAKFLDIILYSREQIRKEAEAMGRTDDQTEP-WGIISVKAQDVDYELPMQPITMMRNALGKSEGGSGVPLVREKYNESVNFWKQHAPI 200          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A7S1TVC6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVC6_9STRA)

HSP 1 Score: 207 bits (526), Expect = 2.000e-63
Identity = 114/209 (54.55%), Postives = 139/209 (66.51%), Query Frame = 0
Query:   27 RTAVKMSTAAADLVGLTPFCLRQFTDST--YPGTKITHPPDDFNARVNE-YLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSV-PAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 231
            RT+ +M+ A+   + L  F LRQF D    Y GTK++    +F A++NE Y AGG  L +GYA FCKH+F+ NFAG++ S +PIT ENE LLR+ YEAR   ELPVL RYFP  +V   P    LDIILYS EQI KE A            WGI+ +KAQ VDYE+PMQPITM+RNALGR +GGSGV L  +KY ESV FWS +A IK
Sbjct:   45 RTSTRMAMASTHELVLDEFALRQFNDRDPGYTGTKVSFDEAEFEAKINEAYDAGGKALVDGYAPFCKHIFVPNFAGVKASTLPITPENEHLLRSSYEARTEQELPVLSRYFPLAAVGEPPECKYLDIILYSREQIAKEAADMDRAAPDTTAPWGIISVKAQDVDYELPMQPITMMRNALGRDQGGSGVELVREKYDESVAFWSGNAPIK 253          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A7S4I9S5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4I9S5_9EUKA)

HSP 1 Score: 205 bits (522), Expect = 3.470e-63
Identity = 113/220 (51.36%), Postives = 143/220 (65.00%), Query Frame = 0
Query:   16 CARAFSSHTASRTAVKMSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNE-YLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAP-AAPTLDIILYSGEQIRKERAA--RQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 231
            C  A  +    + A+ MSTA      L PF +RQF D  Y GT+I H    F A++NE Y +G   L +GYA FCKH+F+ NF   + +++PIT ENE LLR+ YEAR   EL VL+R+FP  +VP P  A  LDIILYS EQI KE  A  R E D    P WGI+ +KAQ VDYE+PMQPITM+RN LG+ EGGSGV ++ ++Y+ SV FWS HA +K
Sbjct:    9 CGAARGAALRPQIALLMSTAKVPTFNLDPFAMRQFDDPNYTGTRIDHDKTGFAAKINELYDSGDYPLVDGYAPFCKHIFVPNFTPAQLNVLPITKENEHLLRSGYEARTEQELEVLVRWFPVDAVPRPPVAKYLDIILYSREQINKEATAMGRDEHDDGGSP-WGIISVKAQDVDYELPMQPITMMRNTLGKEEGGSGVPMDRERYTASVAFWSGHAPLK 227          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A0L0GAW9_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAW9_9EUKA)

HSP 1 Score: 203 bits (517), Expect = 1.590e-62
Identity = 105/188 (55.85%), Postives = 122/188 (64.89%), Query Frame = 0
Query:   45 FCLRQFTDSTYPGTKITHPPDDFNARVNE-YLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 231
            F +RQF D  Y GT+I   P +F A+VNE Y +G   L +GYA FCKHLF+ NF G++     ITA+N  LL+T YEAR   ELPVL+R+F    V AP A  LDIILYS EQI KE  A           WGI+ +K Q  DYE+PMQPITMLRNALGR EGGSGV L  +KYSESV FW  HA  K
Sbjct:   33 FAMRQFDDPNYTGTRIKFDPSEFEAKVNEFYTSGEATLKDGYAPFCKHLFIPNFCGVKCGYARITADNRSLLQTEYEARSEKELPVLVRFFKTEDVTAPDATHLDIILYSKEQIIKENEAMGNPGKIMSAPWGIISVKGQTKDYELPMQPITMLRNALGRDEGGSGVKLEREKYSESVNFWKEHASFK 220          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A7S4A4J5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4J5_9STRA)

HSP 1 Score: 199 bits (507), Expect = 4.560e-61
Identity = 109/191 (57.07%), Postives = 132/191 (69.11%), Query Frame = 0
Query:   44 PFCLRQFTDSTYPGTKITHPPDDFNARVNE-YLAGGGK--LHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 231
            PFCLRQF  ++     +  P  DF  RVNE Y A GG+  L +GYA FCKH+F++NF   +G++  IT ENE LLR+ Y AR   EL VL R+FP+ S+ AP A  LD+ILYS EQIR E AA  ED  S  P WGIV +KAQ VD E+PMQPITM+RNALG  EGGSGVAL+A KY ESV +W+ HA I+
Sbjct:   27 PFCLRQFDKTSGKAPFLDVPVADFEKRVNELYEAAGGEACLVDGYAPFCKHVFVENFVNAKGAVAAITPENEHLLRSGYSARTEKELAVLSRWFPKESIAAPTAKYLDLILYSREQIRIENAAMGEDSGSDAP-WGIVSVKAQDVDSELPMQPITMMRNALGADEGGSGVALDAAKYRESVAYWAGHAPIQ 216          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A7S2UWN7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN7_9STRA)

HSP 1 Score: 200 bits (509), Expect = 9.430e-61
Identity = 99/186 (53.23%), Postives = 124/186 (66.67%), Query Frame = 0
Query:   45 FCLRQFTDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAII 230
            FC+RQF D  Y GT + +    F  +VNEY   G  L +GYA FCKHLF+ NFAG+E SIV IT EN  L+++ Y+AR   EL VL+R+ P+  V    A  LDIILYS EQI KE  A  ++    +  WGI+ +KAQ VD+EIPMQPITM+RNALG+  GGSGV L+  KY+ESV FW +H  I
Sbjct:   76 FCIRQFDDDNYTGTNVYYDKQQFQDKVNEYHDNGTPLVDGYAPFCKHLFVPNFAGVERSIVAITEENRHLIQSEYQARTDKELLVLVRWIPKDKVEPSQASFLDIILYSREQINKENEAMGQEKPDTDAPWGIISVKAQDVDHEIPMQPITMMRNALGKEHGGSGVELSRDKYTESVNFWQSHVTI 261          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8J8_9STRA9.960e-167100.00Flagellar associated protein n=2 Tax=Tribonema min... [more]
A0A835YXC5_9STRA2.990e-7361.50Flagellar associated protein (Fragment) n=1 Tax=Tr... [more]
D7FP80_ECTSI1.140e-6952.70Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S3Y2J4_HETAK9.250e-6956.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4FA99_CHRCT2.000e-6658.21Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S1TVC6_9STRA2.000e-6354.55Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S4I9S5_9EUKA3.470e-6351.36Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A0L0GAW9_9EUKA1.590e-6255.85Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A7S4A4J5_9STRA4.560e-6157.07Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2UWN7_9STRA9.430e-6153.23Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021610Protein of unknown function DUF3228PFAMPF11539DUF3228coord: 41..230
e-value: 1.4E-74
score: 249.8
IPR021610Protein of unknown function DUF3228PANTHERPTHR38666FAMILY NOT NAMEDcoord: 38..231
NoneNo IPR availableGENE3D3.30.2310.50Protein of unknown function (DUF3228), domain 1coord: 107..188
e-value: 1.6E-15
score: 59.1
coord: 32..106
e-value: 5.7E-18
score: 67.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:1494658..1496538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347777mRNA_4033Tribonema minus UTEX_B_3156 mRNAContig_15 1494640..1496543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347777|estExt_Genemark1.C_Ctg_150175 ID=Trimin1|347777|estExt_Genemark1.C_Ctg_150175|Name=jgi.p|Trimin1|347777|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=232bp
MHGIHSLGVLPCIILCARAFSSHTASRTAVKMSTAAADLVGLTPFCLRQF
TDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGI
EGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDII
LYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNA
LGRSEGGSGVALNAQKYSESVEFWSAHAIIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021610DUF3228