Trimin1|347715|estExt_Genemark1.C_Ctg_150049 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|347715
Unique Name	Trimin1\|347715\|estExt_Genemark1.C_Ctg_150049
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	517

Homology

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BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A835ZHK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK3_9STRA)

HSP 1 Score: 890 bits (2300), Expect = 0.000e+0
Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0

Query:    1 MPTPGMPMPGMAGLYGQAAMGINPMIANMLQQAVTPGAFTPVPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVYNTFECCTGERQEEAAKEEPLAERRRGRRGCTGDTEGTAAPHAQPTPPWCWPLGTPSDTAAATDPG 451
            MPTPGMPMPGMAGLYGQAAMGINPMIANMLQQAVTPGAFTPVPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVYNTFECCTGERQEEAAKEEPLAERRRGRRGCTGDTEGTAAPHAQPTPPWCWPLGTPSDTAAATDPG
Sbjct:    1 MPTPGMPMPGMAGLYGQAAMGINPMIANMLQQAVTPGAFTPVPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVYNTFECCTGERQEEAAKEEPLAERRRGRRGCTGDTEGTAAPHAQPTPPWCWPLGTPSDTAAATDPG 451

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BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A835Z9U4_9STRA (U2 small nuclear ribonucleoprotein auxiliary factor large subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9U4_9STRA)

HSP 1 Score: 410 bits (1053), Expect = 1.720e-138
Identity = 220/265 (83.02%), Postives = 231/265 (87.17%), Query Frame = 0

Query:  121 LKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALG--TPA-APTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKL 382
            LKIGRPSKYRGPPV   TWQ LTGQ  L      P  G   SGLDPATKVYRELY+GN QPTMTEA+IAEFLGTTLQKVGLAT+APGNPVV+ARS+GNF FIEMRSIED NAMLNLNGIPFMGSTLRI RPAKY GPMTPAMTWPD+LARLVAQGG A   LG  +PA A  QPATRVLRLNNMLSA+DLADEEGLADIEEETKGECA+FG VKKVHIVRPSTTDA AEKTATGVGYVFVEFEEADAARKAMLSLSTRTFD K++
Sbjct:    2 LKIGRPSKYRGPPVPSKTWQELTGQTPLPSIAAQPAGG---SGLDPATKVYRELYIGNTQPTMTEAAIAEFLGTTLQKVGLATAAPGNPVVLARSNGNFCFIEMRSIEDTNAMLNLNGIPFMGSTLRIGRPAKYPGPMTPAMTWPDILARLVAQGGAAALGLGGGSPAPAAHQPATRVLRLNNMLSAEDLADEEGLADIEEETKGECASFGAVKKVHIVRPSTTDANAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDGKRV 263

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BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A7S2V6E6_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E6_9STRA)

HSP 1 Score: 325 bits (832), Expect = 1.230e-101
Identity = 180/343 (52.48%), Postives = 226/343 (65.89%), Query Frame = 0

Query:   44 DKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 386
            DK   ELFVGNTPP TSE VL+ FLNAA+ QV L TAPGNPI+ CRVSNKFAFIELRS +ETNNCLSLN IPFMG  LKIGRP+KY GP +  +TWQALTGQ    G ++          +DP+TK+YRELY+G+    MTE  + EFLGT +Q+VGL T   GNP+V  R SG F+F+E+RSIE+AN  LNLN IPFMG  L+I RP+KY GP  P + W DVLA+ +A     +   G  AA  QP +RV+ L+NM++ D+L D+    +I E+T+ EC  +G V+ + I RP            GVG VF+EF     A KA+ +L  RTF   K+ + Y
Sbjct:  203 DKAFRELFVGNTPPGTSELVLMEFLNAALNQVKLTTAPGNPIIGCRVSNKFAFIELRSAEETNNCLSLNGIPFMGQLLKIGRPTKYCGPVIQASTWQALTGQQAPEGASV----------VDPSTKLYRELYIGSTTAEMTELGLQEFLGTAMQQVGL-TLQEGNPIVQVRHSGTFAFVELRSIEEANNCLNLNSIPFMGQFLKIGRPSKYPGPQVPHLNWEDVLAKYMA----GEMPTGGGAAQQQP-SRVIALSNMVTTDELMDDTTYQEIVEDTRDECGKYGAVQSMEIPRPGAPH--------GVGKVFIEFTSTADAAKAIGALKGRTFAGNKVDARY 521

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BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A7S4D6W7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6W7_HETAK)

HSP 1 Score: 298 bits (763), Expect = 4.040e-91
Identity = 179/403 (44.42%), Postives = 233/403 (57.82%), Query Frame = 0

Query:    9 PGMAGLYGQAAMGINPMIANMLQQAVTPGAFTPVPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPA-------------------------TRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 386
            PG+A L G A  G   + A                DKT+ ELFVGNTPP TSE VL+ FLNAAM QV  N   GNPI+ CR+S KFAFIELR+ +E NNCL+LN IPFMG  LK+GRP+KY GP     TWQ LTGQ         P A  +   +DP TK+YR+LYVGN  P MTE ++ EFLG+ +++VGL     GN ++  R SG F+FIE+RS+E+A+ M+NLNGIPFMG  L+I RP KY GP  P + W D+LA+ +A  G        PA    PA                         ++V+ L+NM++ DDLAD+E   +I E+T+ EC+ FG V+ + I RP            GVG VFV +   + A+KA+ +LS RTF    + + Y
Sbjct:   18 PGLAALGGTAVPGGAAIGAPGAALTAGLAGAAAAADKTKRELFVGNTPPGTSEVVLMEFLNAAMIQVKQNIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQLTGQ--------APPADPTAVAVDPQTKIYRDLYVGNCSPEMTEPALKEFLGSAMEQVGL-NQQEGNCILQVRLSGTFAFIEVRSVEEASHMMNLNGIPFMGQFLKIKRPTKYPGPEVPHLNWDDILAKYMA--GELKAKPKMPAVAAAPAAVPSXXXXXXXXXXXXXXXAGPGTPSKVMTLSNMVTHDDLADDETYDEILEDTQDECSKFGAVQTIAIPRPKDGPH-------GVGLVFVHYSSEEEAKKAIDALSGRTFAGNTVEAKY 402

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BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A7S3XTW3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTW3_HETAK)

HSP 1 Score: 288 bits (736), Expect = 8.170e-89
Identity = 172/384 (44.79%), Postives = 222/384 (57.81%), Query Frame = 0

Query:    9 PGMAGLYGQAAMGINPMIANMLQQAVTPGAFTPVPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPA-------------------------TRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARK 367
            PG+A L G A  G   + A                DKT+ ELFVGNTPP TSE VL+ FLNAAM QV  N   GNPI+ CR+S KFAFIELR+ +E NNCL+LN IPFMG  LK+GRP+KY GP     TWQ LTGQ         P A  +   +DP TK+YR+LYVGN  P MTE ++ EFLG+ +++VGL     GN ++  R SG F+FIE+RS+E+A+ M+NLNGIPFMG  L+I RP KY GP  P + W D+LA+ +A  G        PA    PA                         ++V+ L+NM++ DDLAD+E   +I E+T+ EC+ FG V+ + I RP            GVG VFV +   + A+K
Sbjct:   18 PGLAALGGTAVPGGAAIGAPGAALTAGLAGAAAAADKTKRELFVGNTPPGTSEVVLMEFLNAAMIQVKQNIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQLTGQ--------APPADPTAVAVDPQTKIYRDLYVGNCSPEMTEPALKEFLGSAMEQVGL-NQQEGNCILQVRLSGTFAFIEVRSVEEASHMMNLNGIPFMGQFLKIKRPTKYPGPEVPHLNWDDILAKYMA--GELKAKPKMPAVAAAPAAVPSXXXXXXXXXXXXXXXAGPGTPSKVMTLSNMVTHDDLADDETYDEILEDTQDECSKFGAVQTIAIPRPKDGPH-------GVGLVFVHYSSEEEAKK 383

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BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A7S2HGX3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGX3_9STRA)

HSP 1 Score: 274 bits (701), Expect = 3.480e-84
Identity = 160/369 (43.36%), Postives = 215/369 (58.27%), Query Frame = 0

Query:   34 VTPGAFTPV---------PDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPAT-KVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVA------QGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 386
            V PGA  P+          DK   ELFVGNTPP TSE +L+ FLN AM +  +  A   PI+QCR + KFAF+E  S+ E N  L+LN IPFMG+ L++ RPSKY GP V   TWQ LTGQ   AG T +P          PA  KV REL++GN  P MTE  + +FLG  +++VGL+   PGNP+   R SG F+FIE+RS E+A   LNLN IP++G+ LR+ RP+KY G  T    W D+LA+ ++        GGA  A  TPA      TRV+ L NML+ ++L  ++   +I E+TK EC+ FG +K + I R             G   +F+E+   D A KA+  L+ RTFD +K+ +V+
Sbjct:   11 VVPGAAAPLMVSPAVAAAQDKVNRELFVGNTPPGTSETLLMAFLNGAMRRTKICAADATPIIQCRTNQKFAFVECASIQEANLALNLNGIPFMGSSLRVSRPSKYAGPHVASKTWQELTGQALPAGLTPVP------ENTSPAEDKVNRELFIGNTTPEMTEGMLTDFLGKAMEQVGLSNQ-PGNPITACRVSGKFAFIELRSKEEAANALNLNNIPYLGAQLRVGRPSKYTGVQTSHGNWEDILAKYMSGELKLPSQGGAPAAAATPAEDVGSPTRVVELKNMLTKEELTSDQDYEEIMEDTKEECSQFGSLKNLVIPRDGP----------GATKIFLEYLSTDDAAKAIQGLAGRTFDGRKVEAVF 362

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BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A7S4RDP7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RDP7_9STRA)

HSP 1 Score: 275 bits (703), Expect = 1.110e-83
Identity = 169/391 (43.22%), Postives = 224/391 (57.29%), Query Frame = 0

Query:    5 GMPMPGMAGLYGQAAMGINP--MIANMLQQAVTPGAFTPVPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPAT-KVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVA------QGGGADKALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 386
            GM MP   G    A  G+ P  M+ N L  A      T   DK   ELFVGNTPP TSE +L  FLN AM +  L  A   PI+QCR + KFAF+E  S+ + N  L+LN IPFMG+ L++ RPSKY GP V   TWQ LTGQ    G T +P          PA  KV REL++GN  P MTE+ + +FLG  +++VGLAT  PGNP+   R SG F+FIE+RS E+    LNLN IP++G+ LR+ RP+KY G  TP   W D+LA+ ++        GGA  A   PAA T   TRV+ L NML+ D+L  ++   +I E+TK EC+ FG +K + I R             G   +F+E+   D A  A+  L+ RTFD +K+ +++
Sbjct:   60 GMMMP---GAQAGAMPGMVPVMMMPNPLMVA------TAAQDKVNRELFVGNTPPGTSEALLTQFLNGAMRRTKLCAADAMPIIQCRTNQKFAFVECASIADANLALNLNGIPFMGSSLRVSRPSKYAGPHVPSKTWQELTGQTLPVGLTPVP------ENTSPAEDKVNRELFIGNTTPEMTESMLTDFLGKAMEQVGLATH-PGNPITACRVSGKFAFIELRSKEETANALNLNNIPYLGAQLRVGRPSKYVGAQTPHGNWEDILAKYMSGELKLPSQGGAPAAAPAPAANTGVPTRVVELKNMLTMDELTSDQDYEEIMEDTKEECSQFGSLKNLVIPRDGP----------GATKIFLEYMSTDDAAAAIKGLAGRTFDGRKVEAIF 424

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BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A6U2QA35_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2QA35_9STRA)

HSP 1 Score: 276 bits (707), Expect = 2.050e-83
Identity = 176/411 (42.82%), Postives = 232/411 (56.45%), Query Frame = 0

Query:    1 MPTPGMP---MPGMAGLY-------------GQAAMGINPMIANMLQQAVTPGAFTPVPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLAR-------LVAQGGGADK--ALGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 386
            +P PG+    MPGM G               G    G+ P + N+L QA    A     +K   ELFVGN PP TS+ +L  FLN AM +  L      PI+Q RVS KFAF EL S D+ N  L+LN IPFMG  L++ RPSKY GP V   TWQ LTGQP  AG   +P      +G     K+ REL+VGN  P MTE S+ +FLG  L++VGL  S PGNP+   R SG F+FIE+R++++A   LNLN IP+MG+TLR+ RP+K+ G  TP   W D+LA+       L AQ G A    A   P  PT   T+V+ L NML+ +DL  ++   +I E+TK EC+ FG + KV I R          +  G G +F+++  A  A KA+  L  RTFD +K+++VY
Sbjct:  104 VPPPGVTPIVMPGMQGTVPALPPNVAPILGTGXXXXGLPPGVPNLLVQAQAQQA-----EKINRELFVGNIPPGTSDMLLREFLNGAMRRTGLCAPNATPILQVRVSPKFAFCELVSYDDANKALNLNGIPFMGIALRVSRPSKYTGPYVPSKTWQELTGQPLPAGMQSVPA-----NGPPGEEKINRELFVGNTTPEMTEESLKDFLGKALEQVGLVNS-PGNPINSCRMSGKFAFIELRTVDEAKKALNLNNIPYMGATLRVGRPSKWTGEHTPHGNWEDILAKYMSGELQLPAQPGHAPPVPAPKAPDVPTATQTKVVALTNMLTKEDLQSDQDYEEILEDTKDECSGFGSLVKVEIPR----------SGPGEGKIFLQYVSASDATKAIEGLRGRTFDGRKVAAVY 493

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BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: A0A7S4I336_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I336_9STRA)

HSP 1 Score: 272 bits (695), Expect = 1.530e-82
Identity = 171/401 (42.64%), Postives = 239/401 (59.60%), Query Frame = 0

Query:    4 PGMPMPGMAGLYGQAAMGINPMIANMLQQAVTPGAFTP--------VPDKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQ---------GGGADKALGTPAAPTQ-PATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 386
            P +PM G     G AAMG    +A     +  PG   P          DK   ELFVGNTPP TSE +L+ FL+ AM +  L    G+PIV CRV+ KFAF+E  +VD  N  L+LN IPF+G+ LK+ RPSKY GP V   +WQ LTG   L  G  + GAGG+++G     K+ REL++GN  P MTE  +++FLG  +++VGL+  APGNP+V  R+SG F+FIE+R+ ++A + LNLN IP++G+ LR+ RP+KY GP TP   W D+LA+ ++          GGGA  A   PAAP    AT V+ L  ML+  DL +++   +I E+T  EC  FG +K+V I R          +  G   +F+E+   + A +A+ SL+ RTFD +K+++VY
Sbjct:   38 PAVPMGGAMPGGGMAAMGQVVPLAGAA--SAIPGLGVPPILAAQNAAQDKVNRELFVGNTPPGTSEMLLIQFLSGAMRRTGLCKPSGSPIVTCRVNQKFAFVECATVDCANRALNLNGIPFLGSCLKVSRPSKYAGPFVPSKSWQELTGT-ALPNG--LAGAGGALAG-SAEDKINRELFIGNTTPEMTEQMLSDFLGKAMEQVGLS-KAPGNPIVTCRTSGKFAFIELRTTDEAASALNLNNIPYLGAQLRVGRPSKYTGPETPHGNWEDILAKYMSGELQLPSKDGGGGAAPA---PAAPHAIDATCVVELCQMLTQQDLENDDEYKEILEDTTEECGQFGSLKRVVIPR----------SGPGATKIFLEYATKEDAARAIASLAGRTFDGRKVTAVY 418

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BLAST of jgi.p|Trimin1|347715 vs. uniprot
Match: K0SQC2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQC2_THAOC)

HSP 1 Score: 258 bits (660), Expect = 2.750e-77
Identity = 153/368 (41.58%), Postives = 212/368 (57.61%), Query Frame = 0

Query:   45 KTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLAR-----------------LVAQGGGADKALGT---------PAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 386
            K   ELFVGNTPP TSE +L+ FL+ AM++VNL      PIV CR ++KF FIEL +VD  N  L+LN IPF+G+ L++ RPSKY GP V   TWQ LTGQP   G   +P   G    L    K+ REL++GN  P MT   + +FLG  +++VGL+T  PGNP+V  R S  F+FIE+RS+++A   LNLN IP++G+ LR+ RP+KY+GP TP   W D+LA+                 LV Q      A  +         P A     + V+ L +ML+  DL D+    DI E+T+ EC++FG +K + I R             G   +F+E+  A+ A KA+  L+ RTFD +K+++VY
Sbjct:   67 KLSRELFVGNTPPGTSEALLMQFLSGAMSRVNLCPPDVTPIVTCRKNDKFCFIELATVDLANKALNLNGIPFLGSSLRVARPSKYSGPHVPSQTWQQLTGQPLPPGMAAVPENTGVTMALSGEDKLSRELFIGNTTPEMTAEMLRDFLGRAMEQVGLSTM-PGNPIVTVRPSAKFAFIEVRSMQEAANALNLNNIPYLGAQLRVGRPSKYSGPETPHGNWEDILAKFMSGELHLKNNATQANPLVQQAHAVAAAASSLAPSLASVPPLASKASPSPVVELRHMLTQQDLDDDNEYNDILEDTRDECSSFGTLKNIVIPRKGP----------GATKIFLEYMTAEDAGKAIAGLAGRTFDGRKVTAVY 423

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347715 vs. uniprot

BLAST of jgi.p|Trimin1|347715 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZHK3_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z9U4_9STRA	1.720e-138	83.02	U2 small nuclear ribonucleoprotein auxiliary facto...	[more]
A0A7S2V6E6_9STRA	1.230e-101	52.48	Hypothetical protein n=2 Tax=Fibrocapsa japonica T...	[more]
A0A7S4D6W7_HETAK	4.040e-91	44.42	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
A0A7S3XTW3_HETAK	8.170e-89	44.79	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2HGX3_9STRA	3.480e-84	43.36	Hypothetical protein n=1 Tax=Helicotheca tamesis T...	[more]
A0A7S4RDP7_9STRA	1.110e-83	43.22	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A6U2QA35_9STRA	2.050e-83	42.82	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A7S4I336_9STRA	1.530e-82	42.64	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
K0SQC2_THAOC	2.750e-77	41.58	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 295..385 e-value: 0.0052 score: 26.0
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 49..124 e-value: 0.0059 score: 25.8 coord: 173..249 e-value: 0.0014 score: 27.9 coord: 295..385 e-value: 0.019 score: 22.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 326..382 e-value: 1.1E-4 score: 22.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 48..128 score: 8.535261
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 172..253 score: 9.865582
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 294..382 score: 10.360188
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 169..265 e-value: 1.1E-16 score: 62.9 coord: 44..145 e-value: 7.5E-17 score: 63.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 289..390 e-value: 2.3E-21 score: 77.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..516
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 455..471
None	No IPR available	PANTHER	PTHR23139	RNA-BINDING PROTEIN	coord: 289..386 coord: 165..259 coord: 32..134
None	No IPR available	CDD	cd12230	RRM1_U2AF65	coord: 49..126 e-value: 8.39073E-32 score: 115.331
None	No IPR available	CDD	cd12232	RRM3_U2AF65	coord: 293..380 e-value: 6.18741E-26 score: 99.1674
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 50..130
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 172..383

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_15	contig	Contig_15:458433..466168 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347715	mRNA_3902	Tribonema minus UTEX_B_3156	mRNA	Contig_15 458023..466168 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|347715|estExt_Genemark1.C_Ctg_150049 ID=Trimin1|347715|estExt_Genemark1.C_Ctg_150049|Name=jgi.p|Trimin1|347715|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=517bp
MPTPGMPMPGMAGLYGQAAMGINPMIANMLQQAVTPGAFTPVPDKTQLEL
FVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELR
SVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAG
GTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVG
LATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISR
PAKYAGPMTPAMTWPDVLARLVAQGGGADKALGTPAAPTQPATRVLRLNN
MLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTAT
GVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVYNTFECCTGERQEEA
AKEEPLAERRRGRRGCTGDTEGTAAPHAQPTPPWCWPLGTPSDTAAATDP
GPAANPGPAADPGPAADPGPAADTGPPADTGPAADTGPTADTGPAADTGP
ATDTRPATTSADGPEL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003954	RRM_dom_euk
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf