Trimin1|347695|estExt_Genemark1.C_Ctg_150005 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347695
Unique NameTrimin1|347695|estExt_Genemark1.C_Ctg_150005
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length288
Homology
[Close]
BLAST of jgi.p|Trimin1|347695 vs. uniprot
Match: A0A835ZBC2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBC2_9STRA)

HSP 1 Score: 546 bits (1406), Expect = 8.480e-196
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0 
Query:    1 MLALIASTTLAALYAIYEHTVPHEAVVLTRDQGSDVVVNWLPAVLSGLASGFAVFRLSKLIKGEEFLPSNMQDNAFPAAFLFGLGGVVLHEFLELATSQKGGLTAWAPLLSIVLTFGCLARYAQGLANEQNPSLAPSIASIVLTGRYVMNAIITGPEEPKEAETVTASVVAAGKKAFKKGKEAVGAVPPPQPPAPDVFAEFMPHLVVLGIAVALTVRFLSGSKDVVPKSAPWCIMAAGIAACANAVYRQVLSTAAGAVAHPDDFAALIAIATASACVARFGVTLQAD 287
            MLALIASTTLAALYAIYEHTVPHEAVVLTRDQGSDVVVNWLPAVLSGLASGFAVFRLSKLIKGEEFLPSNMQDNAFPAAFLFGLGGVVLHEFLELATSQKGGLTAWAPLLSIVLTFGCLARYAQGLANEQNPSLAPSIASIVLTGRYVMNAIITGPEEPKEAETVTASVVAAGKKAFKKGKEAVGAVPPPQPPAPDVFAEFMPHLVVLGIAVALTVRFLSGSKDVVPKSAPWCIMAAGIAACANAVYRQVLSTAAGAVAHPDDFAALIAIATASACVARFGVTLQAD
Sbjct:    1 MLALIASTTLAALYAIYEHTVPHEAVVLTRDQGSDVVVNWLPAVLSGLASGFAVFRLSKLIKGEEFLPSNMQDNAFPAAFLFGLGGVVLHEFLELATSQKGGLTAWAPLLSIVLTFGCLARYAQGLANEQNPSLAPSIASIVLTGRYVMNAIITGPEEPKEAETVTASVVAAGKKAFKKGKEAVGAVPPPQPPAPDVFAEFMPHLVVLGIAVALTVRFLSGSKDVVPKSAPWCIMAAGIAACANAVYRQVLSTAAGAVAHPDDFAALIAIATASACVARFGVTLQAD 287
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347695 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZBC2_9STRA8.480e-196100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:46514..51614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347695mRNA_3858Tribonema minus UTEX_B_3156 mRNAContig_15 46485..51614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347695|estExt_Genemark1.C_Ctg_150005 ID=Trimin1|347695|estExt_Genemark1.C_Ctg_150005|Name=jgi.p|Trimin1|347695|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=288bp
MLALIASTTLAALYAIYEHTVPHEAVVLTRDQGSDVVVNWLPAVLSGLAS
GFAVFRLSKLIKGEEFLPSNMQDNAFPAAFLFGLGGVVLHEFLELATSQK
GGLTAWAPLLSIVLTFGCLARYAQGLANEQNPSLAPSIASIVLTGRYVMN
AIITGPEEPKEAETVTASVVAAGKKAFKKGKEAVGAVPPPQPPAPDVFAE
FMPHLVVLGIAVALTVRFLSGSKDVVPKSAPWCIMAAGIAACANAVYRQV
LSTAAGAVAHPDDFAALIAIATASACVARFGVTLQAD*
back to top