Trimin1|353195|estExt_Genemark1.C_Ctg_1480042 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353195
Unique NameTrimin1|353195|estExt_Genemark1.C_Ctg_1480042
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length131
Homology
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BLAST of jgi.p|Trimin1|353195 vs. uniprot
Match: A0A835Z920_9STRA (Uncharacterized protein n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z920_9STRA)

HSP 1 Score: 236 bits (601), Expect = 2.930e-78
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 
Query:    1 MMGARILICLAMALTTAYSCTTEVWQAGGVKKCVDPCNYSNVVWDRHGNAMCLQYQLTTGGQQICPWSNIAYDADGTPVCMISQNNXXXXXXXXXXXXXXXXXXXVSTSEGFSCPAERIKYNGSLDPYCS 130
            MMGARILICLAMALTTAYSCTTEVWQAGGVKKCVDPCNYSNVVWDRHGNAMCLQYQLTTGGQQICPWSNIAYDADGTPVCMISQNNXXXXXXXXXXXXXXXXXXXVSTSEGFSCPAERIKYNGSLDPYCS
Sbjct:    1 MMGARILICLAMALTTAYSCTTEVWQAGGVKKCVDPCNYSNVVWDRHGNAMCLQYQLTTGGQQICPWSNIAYDADGTPVCMISQNNXXXXXXXXXXXXXXXXXXXVSTSEGFSCPAERIKYNGSLDPYCS 130
[Close]
BLAST of jgi.p|Trimin1|353195 vs. uniprot
Match: A0A835YPY2_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY2_9STRA)

HSP 1 Score: 189 bits (479), Expect = 1.160e-59
Identity = 104/130 (80.00%), Postives = 113/130 (86.92%), Query Frame = 0 
Query:    1 MMGARILICLAMALTTAYSCTTEVWQAGGVKKCVDPCNYSNVVWDRHGNAMCLQYQLTTGGQQICPWSNIAYDADGTPVCMISQNNXXXXXXXXXXXXXXXXXXXVSTSEGFSCPAERIKYNGSLDPYCS 130
            MM ARIL+  AMALTTAYSCTTEVWQAGGVKKCVDPC+YSNV+WDRHGNAMCLQYQLTTGGQQICPW         TP+CM+SQNN  XXXXXXXXXXXXXXXXXVST +GFSCPAERI+YN + DPYC+
Sbjct:    1 MMEARILLGFAMALTTAYSCTTEVWQAGGVKKCVDPCDYSNVIWDRHGNAMCLQYQLTTGGQQICPWXXXXXXXXXTPLCMVSQNNKEXXXXXXXXXXXXXXXXXVSTGDGFSCPAERIRYNDAHDPYCA 130
[Close]
BLAST of jgi.p|Trimin1|353195 vs. uniprot
Match: A0A836CBG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG3_9STRA)

HSP 1 Score: 190 bits (482), Expect = 3.260e-59
Identity = 104/130 (80.00%), Postives = 113/130 (86.92%), Query Frame = 0 
Query:    1 MMGARILICLAMALTTAYSCTTEVWQAGGVKKCVDPCNYSNVVWDRHGNAMCLQYQLTTGGQQICPWSNIAYDADGTPVCMISQNNXXXXXXXXXXXXXXXXXXXVSTSEGFSCPAERIKYNGSLDPYCS 130
            MMGARIL+  AMAL TAYSCTTEVWQAGGVKKCVDPC+YSNV+WDRHGNAMCLQYQLTTGGQQICPW         TP+CM+SQNN  XXXXXXXXXXXXXXXXXVST +GFSCPAERI+YN + DPYC+
Sbjct:    1 MMGARILLGFAMALATAYSCTTEVWQAGGVKKCVDPCDYSNVIWDRHGNAMCLQYQLTTGGQQICPWXXXXXXXXXTPLCMVSQNNKEXXXXXXXXXXXXXXXXXVSTGDGFSCPAERIRYNDAHDPYCA 130
[Close]
BLAST of jgi.p|Trimin1|353195 vs. uniprot
Match: A0A835YJX7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX7_9STRA)

HSP 1 Score: 181 bits (458), Expect = 9.920e-56
Identity = 103/118 (87.29%), Postives = 110/118 (93.22%), Query Frame = 0 
Query:    2 MGARILICLAMALTTAYSCTTEVWQAGGVKKCVDPCNYSNVVWDRHGNAMCLQYQLTTGGQQICPWSNIAYDADGTPVCMISQNNXXXXXXXXXXXXXXXXXXXVSTSEGFSCPAERI 119
            MGARIL+  AMALTTAYSCTTEV QAGGVKKCV PC+YSNV+WDRHG A+CLQYQLTTGGQQICPWSNIAY ADGTP+CM+SQNN XXXXXXXXXXXXXXXXXXVST +GFSCPAERI
Sbjct:    1 MGARILLGFAMALTTAYSCTTEVSQAGGVKKCVAPCDYSNVIWDRHGTALCLQYQLTTGGQQICPWSNIAYGADGTPLCMVSQNNQXXXXXXXXXXXXXXXXXXVSTGDGFSCPAERI 118
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353195 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z920_9STRA2.930e-78100.00Uncharacterized protein n=4 Tax=Tribonema minus Ta... [more]
A0A835YPY2_9STRA1.160e-5980.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CBG3_9STRA3.260e-5980.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJX7_9STRA9.920e-5687.29Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_148contigContig_148:295718..297101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353195mRNA_14560Tribonema minus UTEX_B_3156 mRNAContig_148 295661..297558 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353195|estExt_Genemark1.C_Ctg_1480042 ID=Trimin1|353195|estExt_Genemark1.C_Ctg_1480042|Name=jgi.p|Trimin1|353195|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=131bp
MMGARILICLAMALTTAYSCTTEVWQAGGVKKCVDPCNYSNVVWDRHGNA
MCLQYQLTTGGQQICPWSNIAYDADGTPVCMISQNNQELCKTSSIAYDHA
HQPVCVSTSEGFSCPAERIKYNGSLDPYCS*
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