Trimin1|353180|estExt_Genemark1.C_Ctg_1480007 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353180
Unique Name	Trimin1\|353180\|estExt_Genemark1.C_Ctg_1480007
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	477

Homology

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BLAST of jgi.p|Trimin1|353180 vs. uniprot
Match: A0A836CK75_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK75_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 4.670e-144
Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0

Query:    1 MKLSVTEAHAVLEVEVTATDEEKKKAYRRAALRCHPDKNPNDPEAKAKFQQVSEAYKAVSDPNYHLSDDEXXXXXXXXXXXXXXXEAAMYAMFNAMFGDFMGGGFGGMGGLGXXXXXXXXXXXXXXXXXFGDLNILEELFMANEFMDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRAHQXXXSKGLTPPDATSTCGRCSSRRYAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANGGVRQSDLEVGASVVLRGGLRGRVAFRGAVHYAEGEFLGVELAQPCGKNDGRIRGVRYFACKRNHGLMFCLTTEPVGEDRSGSGGGDGAAWARSTGTGSEGGSNGSAHATG 476
            MKLSVTEAHAVLEVEVTATDEEKKKAYRRAALRCHPDKNPNDPEAKAKFQQVSEAYKAVSDPNYHLSDDEXXXXXXXXXXXXXXXEAAMYAMFNAMFGDFMGGGFGGMGGLGXXXXXXXXXXXXXXXXXFGDLNILEELFMANEFMDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRAHQXXXSKGLTPPDATSTCGRCSSRRYAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANGGVRQSDLEVGASVVLRGGLRGRVAFRGAVHYAEGEFLGVELAQPCGKNDGRIRGVRYFACKRNHGLMFCLTTEPVGEDRSGSGGGDGAAWARSTGTGSEGGSNGSAHATG
Sbjct:    1 MKLSVTEAHAVLEVEVTATDEEKKKAYRRAALRCHPDKNPNDPEAKAKFQQVSEAYKAVSDPNYHLSDDEXXXXXXXXXXXXXXXEAAMYAMFNAMFGDFMGGGFGGMGGLGXXXXXXXXXXXXXXXXXFGDLNILEELFMANEFMDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRAHQXXXSKGLTPPDATSTCGRCSSRRYAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANGGVRQSDLEVGASVVLRGGLRGRVAFRGAVHYAEGEFLGVELAQPCGKNDGRIRGVRYFACKRNHGLMFCLTTEPVGEDRSGSGGGDGAAWARSTGTGSEGGSNGSAHATG 476

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BLAST of jgi.p|Trimin1|353180 vs. uniprot
Match: A0A7S2CMA4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CMA4_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.610e-13
Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 0

Query:  370 QSDLEVGASVVLRGGLRGRVAFRGAVHYAEGEFLGVELAQPCGKNDGRIRGVRYFACKRNHGLM 433
            Q  LE G  V++R  + GRV F G VHYA+GE+ GVEL +P GKN+G I+GV YF+C+  HG+M
Sbjct:   46 QPPLETGGRVLVRETMPGRVHFIGEVHYAKGEWCGVELDEPLGKNNGTIKGVSYFSCEHQHGIM 109

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BLAST of jgi.p|Trimin1|353180 vs. uniprot
Match: W2X5X9_PHYPR (CAP-Gly domain-containing protein n=1 Tax=Phytophthora parasitica CJ01A1 TaxID=1317063 RepID=W2X5X9_PHYPR)

HSP 1 Score: 75.1 bits (183), Expect = 1.710e-12
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0

Query:  375 VGASVVLRGGLRGRVAFRGAVHYAEGEFLGVELAQPCGKNDGRIRGVRYFACKRNHGLM 433
            VG+ V + G   G V F G VHYA+GEF+GV L+ P GKNDG I+GVRYF C  +HGLM
Sbjct:   77 VGSKVYIHGKHTGIVKFTGHVHYAKGEFVGVALSSPVGKNDGAIKGVRYFECPPSHGLM 135

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BLAST of jgi.p|Trimin1|353180 vs. uniprot
Match: G5ADX4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5ADX4_PHYSP)

HSP 1 Score: 78.6 bits (192), Expect = 1.940e-12
Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 0

Query:  375 VGASVVLRGGLRGRVAFRGAVHYAEGEFLGVELAQPCGKNDGRIRGVRYFACKRNHGLM 433
            +G+ V + G   G V F+G VHYA+GEF+GVEL+ P GKNDG I+GVRYF C  +HGLM
Sbjct:  235 IGSKVCINGKHAGVVKFKGHVHYAKGEFVGVELSSPIGKNDGSIKGVRYFECSPSHGLM 293

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BLAST of jgi.p|Trimin1|353180 vs. uniprot
Match: A0A225UKQ3_9STRA (CAP-Gly domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UKQ3_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.100e-12
Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 0

Query:  375 VGASVVLRGGLRGRVAFRGAVHYAEGEFLGVELAQPCGKNDGRIRGVRYFACKRNHGLM 433
            +G+ V +RG   G V F G VHYA+GEF+GV L+ P GKNDG I+GVRYF C  +HGLM
Sbjct:  177 IGSKVCVRGKHAGVVMFTGNVHYAKGEFVGVALSSPAGKNDGSIKGVRYFVCSPSHGLM 235

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BLAST of jgi.p|Trimin1|353180 vs. uniprot
Match: A0A6G0WEX7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WEX7_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.640e-12
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 0

Query:  373 LEVGASVVLRGGLRGRVAFRGAVHYAEGEFLGVELAQPCGKNDGRIRGVRYFACKRNHGLM 433
            + VG+ V++ G L+G +AF G VHYA+GEF+GV L + CGKN+G I+G RYF C   HGLM
Sbjct:  237 INVGSKVIVYGKLKGEIAFIGPVHYAKGEFIGVILDEACGKNNGMIKGERYFDCPTQHGLM 297

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BLAST of jgi.p|Trimin1|353180 vs. uniprot
Match: A0A225ULQ3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225ULQ3_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 5.360e-12
Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 0

Query:  375 VGASVVLRGGLRGRVAFRGAVHYAEGEFLGVELAQPCGKNDGRIRGVRYFACKRNHGLM 433
            +G+ V +RG   G V F G VHYA+GEF+GV L+ P GKNDG I+GVRYF C  +HGLM
Sbjct:  246 IGSKVCIRGKHAGIVMFTGNVHYAKGEFVGVALSSPAGKNDGSIKGVRYFECSPSHGLM 304

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BLAST of jgi.p|Trimin1|353180 vs. uniprot
Match: A0A6A6Y4B3_9PEZI (uncharacterized protein (Fragment) n=1 Tax=Mytilinidion resinicola TaxID=574789 RepID=A0A6A6Y4B3_9PEZI)

HSP 1 Score: 73.2 bits (178), Expect = 6.630e-12
Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 0

Query:  371 SDLEVGASVVLRGGLRGRVAFRGAVHYAEGEFLGVELAQPCGKNDGRIRGVRYFACKRNHGLMF 434
            SD +VG +V L  G +  + F G +H A+G+F+GVE A P GKNDG +RG RYF C  NHG+  
Sbjct:    2 SDFKVGQTVALLDGRQAVIRFIGTLHIADGQFIGVEFADPSGKNDGSVRGERYFDCPPNHGMFM 65

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BLAST of jgi.p|Trimin1|353180 vs. uniprot
Match: A0A7S2WIT8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIT8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.750e-11
Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 0

Query:    6 TEAHAVLEVEVTATDEEKKKAYRRAALRCHPDKNPNDPEAKAKFQQVSEAYKAVSDPNYHLSDDEXXXXXXXXXXXXXXXEAAMYAMFNAMFG 98
            +EA  +L V   AT+++ KKA+++AALR HPDKN ++P AK +FQ+VSEAYK ++DPN+   +D                E  ++ MFNAMFG
Sbjct:    4 SEALEILGVSEGATEDQIKKAFKKAALRTHPDKNRDNPNAKLEFQKVSEAYKCLTDPNFEEDED------------FGMDEDELFNMFNAMFG 84

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BLAST of jgi.p|Trimin1|353180 vs. uniprot
Match: D0NM99_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NM99_PHYIT)

HSP 1 Score: 75.1 bits (183), Expect = 2.660e-11
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0

Query:  375 VGASVVLRGGLRGRVAFRGAVHYAEGEFLGVELAQPCGKNDGRIRGVRYFACKRNHGLM 433
            +G+ V + G   G V F G VHYA+GEF+GV L+ P GKNDG I+GVRYF C  +HGLM
Sbjct:  230 IGSRVYIHGKHAGVVKFTGQVHYAKGEFVGVALSSPVGKNDGSIKGVRYFECSPSHGLM 288

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353180 vs. uniprot

BLAST of jgi.p|Trimin1|353180 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CK75_9STRA	4.670e-144	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2CMA4_9STRA	2.610e-13	54.69	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
W2X5X9_PHYPR	1.710e-12	59.32	CAP-Gly domain-containing protein n=1 Tax=Phytopht...	[more]
G5ADX4_PHYSP	1.940e-12	59.32	Uncharacterized protein n=1 Tax=Phytophthora sojae...	[more]
A0A225UKQ3_9STRA	2.100e-12	59.32	CAP-Gly domain-containing protein (Fragment) n=1 T...	[more]
A0A6G0WEX7_9STRA	3.640e-12	55.74	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A225ULQ3_9STRA	5.360e-12	59.32	Uncharacterized protein n=1 Tax=Phytophthora megak...	[more]
A0A6A6Y4B3_9PEZI	6.630e-12	50.00	uncharacterized protein (Fragment) n=1 Tax=Mytilin...	[more]
A0A7S2WIT8_9STRA	1.750e-11	44.09	Hypothetical protein (Fragment) n=2 Tax=Rhizochrom...	[more]
D0NM99_PHYIT	2.660e-11	57.63	Uncharacterized protein n=2 Tax=Phytophthora infes...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 27..42 score: 50.84 coord: 44..64 score: 39.25 coord: 9..27 score: 43.16
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 6..64 e-value: 5.2E-22 score: 89.1
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 9..63 e-value: 1.0E-17 score: 64.0
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 7..76 score: 15.853932
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 7..61 e-value: 6.81611E-21 score: 83.7489
IPR000938	CAP Gly-rich domain	SMART	SM01052	CAP_GLY_2	coord: 375..439 e-value: 5.5E-14 score: 62.5
IPR000938	CAP Gly-rich domain	PFAM	PF01302	CAP_GLY	coord: 376..433 e-value: 1.7E-15 score: 56.7
IPR000938	CAP Gly-rich domain	PROSITE	PS00845	CAP_GLY_1	coord: 393..424
IPR000938	CAP Gly-rich domain	PROSITE	PS50245	CAP_GLY_2	coord: 393..435 score: 14.337414
IPR036859	CAP Gly-rich domain superfamily	GENE3D	2.30.30.190		coord: 367..441 e-value: 2.3E-19 score: 70.7
IPR036859	CAP Gly-rich domain superfamily	SUPERFAMILY	74924	Cap-Gly domain	coord: 368..433
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 6..110 e-value: 1.4E-20 score: 75.9
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 4..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 445..476
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 461..476
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..350
None	No IPR available	PANTHER	PTHR45006	DNAJ-LIKE PROTEIN 1	coord: 9..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_148	contig	Contig_148:34482..37952 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353180	mRNA_14525	Tribonema minus UTEX_B_3156	mRNA	Contig_148 34410..37952 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353180|estExt_Genemark1.C_Ctg_1480007 ID=Trimin1|353180|estExt_Genemark1.C_Ctg_1480007|Name=jgi.p|Trimin1|353180|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=477bp
MKLSVTEAHAVLEVEVTATDEEKKKAYRRAALRCHPDKNPNDPEAKAKFQ
QVSEAYKAVSDPNYHLSDDEDDDDDGHHAHHGAAEEAAMYAMFNAMFGDF
MGGGFGGMGGLGGGGRGGFGARKGGPGGGFGDLNILEELFMANEFMDRGG
GGSEAAASLYYDDSDAYSDGEGSEDDEDDYSDDGIDEYYCGGGPTSEQDL
LEMMMIEMLLGRGGGEPQPRAHQPPPSKGLTPPDATSTCGRCSSRRYAKP
PHARAAQAAATARSGADDAARTAQQDAAKKRRTQKKNAKRRAKQKSAKQR
AAAAAAKAAAAARQGSAAPHARQQQDSASSLEASSDDEGSSNEGGVEGGA
AGAGVPAAAAAAGANGGVRQSDLEVGASVVLRGGLRGRVAFRGAVHYAEG
EFLGVELAQPCGKNDGRIRGVRYFACKRNHGLMFCLTTEPVGEDRSGSGG
GDGAAWARSTGTGSEGGSNGSAHATG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001623	DnaJ_domain
IPR000938	CAP-Gly_domain
IPR036859	CAP-Gly_dom_sf
IPR036869	J_dom_sf