Trimin1|353175|estExt_Genemark1.C_Ctg_1470031 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353175
Unique Name	Trimin1\|353175\|estExt_Genemark1.C_Ctg_1470031
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	186

Homology

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BLAST of jgi.p|Trimin1|353175 vs. uniprot
Match: A0A836CMZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMZ6_9STRA)

HSP 1 Score: 367 bits (942), Expect = 1.840e-128
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0

Query:    1 MELPDAVTKYLEESLKRKGCTVLAREWDVRGGPHLGKGDLVVLLPCNTHLVVEVKYLDFDATGRNQCVKRRKHRRYVEEQAPRYGAKWAEHYALHNQLVLSAFFTNETGLSGFALDVQRPLQKQETDEAESNMGVGWIGAGVVGLAAIAGAIAVSAARQQRQCEDNGNRNAEQQRERDEKECIVS 185
            MELPDAVTKYLEESLKRKGCTVLAREWDVRGGPHLGKGDLVVLLPCNTHLVVEVKYLDFDATGRNQCVKRRKHRRYVEEQAPRYGAKWAEHYALHNQLVLSAFFTNETGLSGFALDVQRPLQKQETDEAESNMGVGWIGAGVVGLAAIAGAIAVSAARQQRQCEDNGNRNAEQQRERDEKECIVS
Sbjct:    1 MELPDAVTKYLEESLKRKGCTVLAREWDVRGGPHLGKGDLVVLLPCNTHLVVEVKYLDFDATGRNQCVKRRKHRRYVEEQAPRYGAKWAEHYALHNQLVLSAFFTNETGLSGFALDVQRPLQKQETDEAESNMGVGWIGAGVVGLAAIAGAIAVSAARQQRQCEDNGNRNAEQQRERDEKECIVS 185

[Close]

BLAST of jgi.p|Trimin1|353175 vs. uniprot
Match: A0A835YVQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVQ4_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.820e-23
Identity = 51/85 (60.00%), Postives = 63/85 (74.12%), Query Frame = 0

Query:    9 KYLEESLKRKGCTVLAREWDVRGG-PHLGKGDLVVLLPCNTHLVVEVKYLDFDATGRNQCVKRRKHRRYVEEQAPRYGAKWAEHY 92
            ++L++ L++ GC VLA EWDV  G P+ G GDLVV LPC THLV E+K+LDF A G    VKRRKHRR VE+QA RYG+ WA+ Y
Sbjct:   36 EWLKQHLQQLGCEVLAEEWDVVPGMPNCGVGDLVVELPCGTHLVTEIKFLDFYAHGNTATVKRRKHRREVEQQACRYGSLWAKQY 120

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353175 vs. uniprot

BLAST of jgi.p|Trimin1|353175 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CMZ6_9STRA	1.840e-128	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YVQ4_9STRA	3.820e-23	60.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..185

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_147	contig	Contig_147:351196..352772 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353175	mRNA_16838	Tribonema minus UTEX_B_3156	mRNA	Contig_147 351196..352772 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353175|estExt_Genemark1.C_Ctg_1470031 ID=Trimin1|353175|estExt_Genemark1.C_Ctg_1470031|Name=jgi.p|Trimin1|353175|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=186bp
MELPDAVTKYLEESLKRKGCTVLAREWDVRGGPHLGKGDLVVLLPCNTHL
VVEVKYLDFDATGRNQCVKRRKHRRYVEEQAPRYGAKWAEHYALHNQLVL
SAFFTNETGLSGFALDVQRPLQKQETDEAESNMGVGWIGAGVVGLAAIAG
AIAVSAARQQRQCEDNGNRNAEQQRERDEKECIVS*