Trimin1|353167|estExt_Genemark1.C_Ctg_1470020 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353167
Unique NameTrimin1|353167|estExt_Genemark1.C_Ctg_1470020
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1403
Homology
BLAST of jgi.p|Trimin1|353167 vs. uniprot
Match: A0A835Z938_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z938_9STRA)

HSP 1 Score: 2070 bits (5363), Expect = 0.000e+0
Identity = 1402/1402 (100.00%), Postives = 1402/1402 (100.00%), Query Frame = 0
Query:    1 MLDGRPSSALPLLTRALTLRPTNAAVLGLRSLARERCGLTASATSDARAIVLLQPRNSGGYVRLASVCLAANDYPSAACVAFRGMRCGDTHRNGELAAIMAKARAQGHLPPVPWTPVGWAEAAMWRLRADGKVMYCGCSSSIKAIGVDTGEQLLRLAGHKLEVTALVLHPADADVLLSSSQDGTVRQWNVKLGADGDESSRCLKVFNLESAVHYLMIAPRLASEESAAXXXXXXXXXXXXXXXAQRAKPPVAADAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVDAXXXXXXPPAAKPKSGQRKAGSDVGVWKIVRVDLNRSSGRRWTAATLNKGRALQITDAVTGARHTMPAGQWPVTAVTASCSGAVATGHKDGSMTVWRGLGTAAEEAILSGAGEGGRGRAGGRPKSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALAPTRELVDYSAKIKLGIDASSGAVVINGQPGHLQYYDPHQDLLSGVLEVVPFNRVSRVDKLRMAPPLVEHFAFSSSGERVATLDTREVQGEGLRQGDVRCLKFWALDRRSGRFLLESSVDQPHQGAVTSLCYHPLVDRAVTTSLDETFKVWTMQRRDPSLTTPSTTVQQQQQGPQYMWTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFGGLVTLWGGAGASLLAVLLPPLSAVGSAAARVHALAFVPRTALLFAQRAGAATLTDVVAATTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCLQRSASSSLVLLMGRSSAVPLCAWHLPSDVLHSMVLIGSSGSGGGGAERXXXXXXXXXXXXXXXXXXXXSSSGEAQLDATGVRRIGGAAAAPALPLRAXXXXXXXXXXXXVVVHRSAGIEALFRDMPTSDLPPATELLGAFMRAQLRPAPAEAPPWSAXXXXXXXXXXXXXXXXXXXXXXXGEVAWGAEDGESDEGEGXXXXXXXXXXXXXXXXDTVLLEMFXXXXXXXXXXXXXXXXXXXXRTELSADSACSAAEVPVADPTMPIDEAKAAALALAHTKDSARLPDIVKSLEKQFSSEPIHTVDFFNLAISGEWDVVHSTLYPKRAPAAVVSSEDLTVRSLRQTITPSDGGNPREGEITTAVEWELPEQGITGTFEVVAQYLTGDNSSMKLTTTGHRLKPSSMPSDPQGLVELLQRHMPFELFDPDEQAVFTTYVDHDMRIVWAAGGRTGANGSRIIFLRHHSQ 1402
            MLDGRPSSALPLLTRALTLRPTNAAVLGLRSLARERCGLTASATSDARAIVLLQPRNSGGYVRLASVCLAANDYPSAACVAFRGMRCGDTHRNGELAAIMAKARAQGHLPPVPWTPVGWAEAAMWRLRADGKVMYCGCSSSIKAIGVDTGEQLLRLAGHKLEVTALVLHPADADVLLSSSQDGTVRQWNVKLGADGDESSRCLKVFNLESAVHYLMIAPRLASEESAAXXXXXXXXXXXXXXXAQRAKPPVAADAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVDAXXXXXXPPAAKPKSGQRKAGSDVGVWKIVRVDLNRSSGRRWTAATLNKGRALQITDAVTGARHTMPAGQWPVTAVTASCSGAVATGHKDGSMTVWRGLGTAAEEAILSGAGEGGRGRAGGRPKSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALAPTRELVDYSAKIKLGIDASSGAVVINGQPGHLQYYDPHQDLLSGVLEVVPFNRVSRVDKLRMAPPLVEHFAFSSSGERVATLDTREVQGEGLRQGDVRCLKFWALDRRSGRFLLESSVDQPHQGAVTSLCYHPLVDRAVTTSLDETFKVWTMQRRDPSLTTPSTTVQQQQQGPQYMWTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFGGLVTLWGGAGASLLAVLLPPLSAVGSAAARVHALAFVPRTALLFAQRAGAATLTDVVAATTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCLQRSASSSLVLLMGRSSAVPLCAWHLPSDVLHSMVLIGSSGSGGGGAERXXXXXXXXXXXXXXXXXXXXSSSGEAQLDATGVRRIGGAAAAPALPLRAXXXXXXXXXXXXVVVHRSAGIEALFRDMPTSDLPPATELLGAFMRAQLRPAPAEAPPWSAXXXXXXXXXXXXXXXXXXXXXXXGEVAWGAEDGESDEGEGXXXXXXXXXXXXXXXXDTVLLEMFXXXXXXXXXXXXXXXXXXXXRTELSADSACSAAEVPVADPTMPIDEAKAAALALAHTKDSARLPDIVKSLEKQFSSEPIHTVDFFNLAISGEWDVVHSTLYPKRAPAAVVSSEDLTVRSLRQTITPSDGGNPREGEITTAVEWELPEQGITGTFEVVAQYLTGDNSSMKLTTTGHRLKPSSMPSDPQGLVELLQRHMPFELFDPDEQAVFTTYVDHDMRIVWAAGGRTGANGSRIIFLRHHSQ
Sbjct:    1 MLDGRPSSALPLLTRALTLRPTNAAVLGLRSLARERCGLTASATSDARAIVLLQPRNSGGYVRLASVCLAANDYPSAACVAFRGMRCGDTHRNGELAAIMAKARAQGHLPPVPWTPVGWAEAAMWRLRADGKVMYCGCSSSIKAIGVDTGEQLLRLAGHKLEVTALVLHPADADVLLSSSQDGTVRQWNVKLGADGDESSRCLKVFNLESAVHYLMIAPRLASEESAAXXXXXXXXXXXXXXXAQRAKPPVAADAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVDAXXXXXXPPAAKPKSGQRKAGSDVGVWKIVRVDLNRSSGRRWTAATLNKGRALQITDAVTGARHTMPAGQWPVTAVTASCSGAVATGHKDGSMTVWRGLGTAAEEAILSGAGEGGRGRAGGRPKSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALAPTRELVDYSAKIKLGIDASSGAVVINGQPGHLQYYDPHQDLLSGVLEVVPFNRVSRVDKLRMAPPLVEHFAFSSSGERVATLDTREVQGEGLRQGDVRCLKFWALDRRSGRFLLESSVDQPHQGAVTSLCYHPLVDRAVTTSLDETFKVWTMQRRDPSLTTPSTTVQQQQQGPQYMWTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFGGLVTLWGGAGASLLAVLLPPLSAVGSAAARVHALAFVPRTALLFAQRAGAATLTDVVAATTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCLQRSASSSLVLLMGRSSAVPLCAWHLPSDVLHSMVLIGSSGSGGGGAERXXXXXXXXXXXXXXXXXXXXSSSGEAQLDATGVRRIGGAAAAPALPLRAXXXXXXXXXXXXVVVHRSAGIEALFRDMPTSDLPPATELLGAFMRAQLRPAPAEAPPWSAXXXXXXXXXXXXXXXXXXXXXXXGEVAWGAEDGESDEGEGXXXXXXXXXXXXXXXXDTVLLEMFXXXXXXXXXXXXXXXXXXXXRTELSADSACSAAEVPVADPTMPIDEAKAAALALAHTKDSARLPDIVKSLEKQFSSEPIHTVDFFNLAISGEWDVVHSTLYPKRAPAAVVSSEDLTVRSLRQTITPSDGGNPREGEITTAVEWELPEQGITGTFEVVAQYLTGDNSSMKLTTTGHRLKPSSMPSDPQGLVELLQRHMPFELFDPDEQAVFTTYVDHDMRIVWAAGGRTGANGSRIIFLRHHSQ 1402          
BLAST of jgi.p|Trimin1|353167 vs. uniprot
Match: A0A1Y2GCT4_9FUNG (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GCT4_9FUNG)

HSP 1 Score: 189 bits (479), Expect = 2.070e-45
Identity = 135/387 (34.88%), Postives = 193/387 (49.87%), Query Frame = 0
Query:  448 GAVATGHKDGSMTVWRGLGTAAEEAILSGAGEGGRGRAGGRPKSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALAPTRELVDYSAKIKLGIDASSGAVVINGQPGHLQYYDPHQDLLSGVLEVVPFNRVSRVDKLRMAPPLVEHFAFSS--SGERVATLDTREVQGEGLRQGDVRCLKFWALDRRSGRFLLESSVDQPHQGAVTSLCYHPL----VDRAVTTSLDETFKVWTMQRRDPSLTTPSTTVQQQQQG--PQYMWTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFGGLVTLW 826
            G +ATG + G +T+W   G   +                 RP +TT+HWHAH V+ LAF+ DG YL SGGEE VLV W L+ G       + FLPRLG+ +  I +SPD    A+  +DN V ++R                        + +    A++GL  +    L +      L I+  +G VV+NG PG LQ+YDP ++     LEV P N+VSR D+  + PP V H AFS+  S   +AT+D R+ Q           LKFW  D  +  ++L + VD PH   +TS  ++P         VTTSLD TFKVW +  +  S           ++G   +  W+C R+  + R +    + FSSDGSLLA+A+G ++TLW
Sbjct:  221 GCIATGDERGRITLWYCFGKNID-----------------RPVTTTMHWHAHQVAALAFTSDGNYLLSGGEESVLVIWQLQTG------FKQFLPRLGSEIKHITVSPDQSLYAIGQQDNSVNVIRS-----------------------IDLKIKIAIQGLKYSHVNHLHN-PLSTGLVIEPRNGHVVLNGLPGTLQFYDPIKEQHIMELEVTPRNKVSRTDEKEIIPPRVMHCAFSNDKSARWMATVDGRDDQ----ETTPELYLKFWEYDSDARTYILNTRVDTPHSKEITSCVFNPREGDHAPMVVTTSLDGTFKVWELTHQGES-----------RRGIEAERAWSC-RSTGFYRDMVPYCSGFSSDGSLLAIAYGQIITLW 544          
BLAST of jgi.p|Trimin1|353167 vs. uniprot
Match: A0A1Y1YRQ1_9FUNG (WD40 repeat-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YRQ1_9FUNG)

HSP 1 Score: 187 bits (476), Expect = 8.860e-45
Identity = 125/346 (36.13%), Postives = 180/346 (52.02%), Query Frame = 0
Query:  488 RPKSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALAPTRELVDYSAKIKLGIDASSGAVVINGQPGHLQYYDPHQDLLSGVLEVVPFNRVSRVDKLRMAPPLVEHFAFSSSGERVATLDTREVQGEGLRQGDVRCLKFWALDRRSGRFLLESSVDQPHQGAVTSLCYHPLV--DRAVTTSLDETFKVWTMQ-----RRDPSLTTPSTTVQQQQQGPQYMWTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFGGLVTLW 826
            RP ++ +HWHAH V+ +AF+ DG Y+ SGGEE VLV W L+ G      ++ FLPRLG+ +  I +SPD    A+   DN V +V     AV+                   +S   A++GL  A          +  L ++  +  +V+NG PG +Q+Y+P+ D     LEV P NRVSR D+  +  P VEH AFS +G+ +AT+D+R+  GE   +     LKFW  D  +  + + + VD PHQG +TSL +HP +     VT   D+ FKVW +Q     R D S                  W C R+V + R  +   A FS DGS+LAV++G ++TLW
Sbjct:  284 RPVTSVMHWHAHKVNHIAFTDDGVYMVSGGEEAVLVVWQLQTG------HRQFLPRLGSEIKSIVISPDQSLYAVGHLDNSVRIVS----AVD-------------------LSIKQAIQGLKYAQMNH-TSNPLRTGLIVEPKNNHIVLNGVPGTIQFYNPYTDRHVMELEVSPRNRVSRTDEKEIIEPQVEHVAFSKNGDWMATVDSRD-DGENTPE---LYLKFWKFDPNTQSYTMNTRVDFPHQGRITSLQFHPSIRSPMVVTAGSDKKFKVWELQTPVDRRADVS------------------WVC-RSVGFYRDSTPYNATFSEDGSILAVSYGHIITLW 576          
BLAST of jgi.p|Trimin1|353167 vs. uniprot
Match: A0A261Y783_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y783_9FUNG)

HSP 1 Score: 183 bits (465), Expect = 5.570e-44
Identity = 130/343 (37.90%), Postives = 176/343 (51.31%), Query Frame = 0
Query:  488 RPKSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALAPTRELVDYSAKIKLGIDASSGAVVINGQPGHLQYYDPHQDLLSGVLEVVPFNRVSRVDKLRMAPPLVEHFAFSSSGERVATLDTREVQGEGLRQGDVRCLKFWALDRRSGRFLLESSVDQPHQGAVTSLCYHP----LVDRAVTTSLDETFKVWTMQRRDPSLTTPSTTVQQQQQGPQYMWTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFGGLVTLW 826
            RP ++TLHWHAH V+ LAFS DG YL SGGEE  LV W L  G      ++ FLPRLGA +  I +SP+    AL   DN V +V                      V L L      +R +  A  +    +  K  + I+     VV++G PG LQ+Y+   D     LEV   N+VSR D+  +  P V+ FAF  +GE +AT+D+R  +           LKFW  D  +  ++L + VD PH+G +TSL + P     +  AVTTS D+TFK+W +Q +    T  STT           W+C R+    R     AA+FSSDGSLLAVA+G L+T+W
Sbjct:  253 RPVTSTLHWHAHKVNHLAFSDDGVYLLSGGEEATLVIWQLETG------HRQFLPRLGAEIKSITLSPNQALYALGFNDNSVKVVN--------------------AVDLTLKQVVQGVRFIHNAGAQ----HQEKAIIAIEPRHHNVVLSGVPGALQFYNARNDRHVMELEVALRNKVSRTDEKEIVQPKVDLFAFFGNGEWMATVDSRNDE----ETTPELYLKFWQWDADAQNYVLNTRVDHPHKGPITSLQFTPSKPDTIPLAVTTSADKTFKIWQLQTQ---ATRTSTT-------GDISWSC-RSSGTFRDQEPTAASFSSDGSLLAVAYGHLITIW 550          
BLAST of jgi.p|Trimin1|353167 vs. uniprot
Match: A0A197JLM2_9FUNG (WD40 repeat-like protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JLM2_9FUNG)

HSP 1 Score: 183 bits (465), Expect = 1.210e-43
Identity = 132/385 (34.29%), Postives = 196/385 (50.91%), Query Frame = 0
Query:  448 GAVATGHKDGSMTVWRGLGTAAEEAILSGAGEGGRGRAGGRPKSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALAPTRELVDYSAKIKLGIDASSGAVVINGQPGHLQYYDPHQDLLSGVLEVVPFNRVSRVDKLRMAPPLVEHFAFSS--SGERVATLDTREVQGEGLRQGDVRCLKFWALDRRSGRFLLESSVDQPHQGAVTSLCYHPLVDR----AVTTSLDETFKVWTMQRRDPSLTTPSTTVQQQQQGPQYMWTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFGGLVTLW 826
            G +ATG + G +T+W   G   +                 RP +T++HWHAH V+ LAF+ DG YL SGGEE VLV W +  G      ++ FLPRLG+ +  I +SPD    A+  +DN V ++R    AV+                   +    +++GL L+ T + ++      L ++  +G VV+NG PG LQ+YDP +D     LEV P N+VSR  +  +  P V H AFS+  SG  + T+D R+ +           +KFW  D  S  ++L + VD PH+  VTS  ++P         VTTSLD TFKVW +  +  +         ++    +  W+C R+  + R +   AA F+SDGSLLAVA+  ++TLW
Sbjct:  222 GCIATGDERGRITLWYCFGKNVD-----------------RPVTTSMHWHAHKVASLAFTSDGNYLLSGGEESVLVIWQVSTG------HKQFLPRLGSEIKHITISPDDALYAMGHQDNSVNVIR----AVD-------------------LKIKNSIQGLKLSHT-DPINNPLLTGLVVEPRNGHVVLNGLPGTLQFYDPIKDQHIMELEVFPRNKVSRTYEKEIVAPRVMHVAFSNDKSGRWMVTVDGRDDKTTT----PELYIKFWEYDDDSHTYVLNTRVDSPHKKEVTSCIFNPRQGNQSPMVVTTSLDGTFKVWELTHQGEA---------RRGVEAERAWSC-RSTGFYRDMVPRAAGFASDGSLLAVAYDQIITLW 545          
BLAST of jgi.p|Trimin1|353167 vs. uniprot
Match: A0A7S1CJE4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJE4_9STRA)

HSP 1 Score: 177 bits (448), Expect = 5.980e-43
Identity = 158/449 (35.19%), Postives = 203/449 (45.21%), Query Frame = 0
Query:  417 RALQITDAVTGARHTMPAGQWPVTAVTASCSGA-VATGHKDGSMTVWRGLGTAAEEAILSGAGEGGRGRAGGRPKSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALA--PTRELVDYSAKIKLGIDASSGAVVINGQP--GHLQYYDPHQDLLSGVLEVVPFNRVSRVDKLRMAPPLVEHFAFSSSGERVATLDTREVQGEGLRQGDVRCLKFWALDRRSGRFLLESSVDQPHQGAVTSLCYHPLVDRAVTTSLDETFKVWTMQRRDPSLTTPSTTVQQQQQG--------------------PQYMWTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFGGLVTLWGGAGASLLAVLLPP 840
            R L + D+ +GA    P    P+TAV    +   V TG  +G +  W  L  +A +   +               +TT HWHAHAV+C AF+PDG YL SGG+EGVLV W L  G       + FLPRLGAPL  I  +    + A+ L  N V+ V                   S+ VA V        RGL LA  P  E V     +    D  +GAV +NG P  G LQ YD  +D     L+V P N VS  D     P  V   AFS+ G  VAT+D      E L   D   LK W     +GR++L + VD PH+  V++L YHP +   V+ S D TFKVW  Q+RD     P+    QQ +                         W C R+V + R      AAFS+DGSLLAVA   ++TLW     +LL  L  P
Sbjct:   17 RTLFVCDSASGAVRKFPHAL-PLTAVAVHPTDPYVITGDAEGKIRFWYCLDASAADVDAASV------------TTTTQHWHAHAVTCAAFTPDGAYLLSGGQEGVLVVWQLATG------TKTFLPRLGAPLRSIGCAGSQAWYAVGLSSNAVSFVNA----------------LSSRVAFVY-------RGLELAAHPASERVLAGGIVA---DPRTGAVAVNGAPSGGALQLYDAIRDRHVVALQVAPRNFVSGPDVTPPPPVRVYCVAFSADGTSVATVD--RCDDEML---DTLSLKMWDWVPEAGRYVLNTRVDSPHKTTVSALRYHPTLPVIVSASHDRTFKVWERQQRDKG---PTMAESQQPRSRAAKRKARANAAAAAMSAAVKDTAWGC-RSVGFYRDFPLHDAAFSADGSLLAVACAHILTLWAPMTTTLLRTLAHP 411          
BLAST of jgi.p|Trimin1|353167 vs. uniprot
Match: A0A8H7BS11_9FUNG (WD repeat-containing protein 75 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BS11_9FUNG)

HSP 1 Score: 181 bits (459), Expect = 9.880e-43
Identity = 121/344 (35.17%), Postives = 176/344 (51.16%), Query Frame = 0
Query:  489 PKSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALAPTRELVDYSAKIKLG--IDASSGAVVINGQPGHLQYYDPHQDLLSGVLEVVPFNRVSRVDKLRMAPPLVEHFAFSSSGERVATLDTREVQGEGLRQGDVRCLKFWALDRRSGRFLLESSVDQPHQGAVTSLCYHPLVDR----AVTTSLDETFKVWTMQRRDPSLTTPSTTVQQQQQGPQYMWTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFGGLVTLW 826
            P ++ LHWH H V  L F  DG YL SGGEE VLV W L         ++ +LPR+G P+T I +SP+  +  L L DN + LV   +  +                          ++GL  A   ++     K+  G  I+  +  +V+NG PG +Q+++ + D     LEV P NRVSR  +  M    VEH AF   GE +AT+D R+ +   +       LKFW  D  +  +LL + VD PH  AVTS+ ++P + R    A+TTS+D+TFKVW +          ++ + +     +  WTC R++   R    +AAAFS DGS+LAVAFG ++TLW
Sbjct:  287 PVTSGLHWHHHPVRALKFLADGAYLLSGGEEAVLVIWQLE------TLHKQYLPRMGGPITSINVSPNHKYYCLGLADNSIRLVNSISQTIHQ-----------------------VIQGLQYA---QMATDLNKLTTGLMIEPHNHHIVLNGIPGAIQFFNTYADQHVMDLEVAPINRVSRAGEKEMVRSHVEHVAFLPRGEWMATVDMRDDKETTMEL----YLKFWQWDPSTQTYLLHTRVDNPHSKAVTSITFNPALSRHGPMAITTSIDKTFKVWCL----------TSNLGRNYDKGEIGWTC-RSIGVYRDYEPQAAAFSDDGSILAVAFGPIITLW 583          
BLAST of jgi.p|Trimin1|353167 vs. uniprot
Match: A0A6H5KD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD90_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 2.280e-42
Identity = 166/524 (31.68%), Postives = 230/524 (43.89%), Query Frame = 0
Query:  416 GRALQITDAVTGARHTMPAGQWPVTAVTASCSG-AVATGHKDGSMTVWRGLGTAAEEA--------ILSGAGEGGRGRAGGRPKSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALAPTRELVDYSAKIKLGIDASSGAVVINGQPGHLQYYDPHQDLLSGVLEVVPFNRVS--------RVDKLRMAP------------PLVEHFAFSSSGERVATLDTREVQGEGLRQGDVRCLKFWALDRRS---------------------------------GRFLLESSVDQPHQ--GAVTSLCYHPLVDRAVTTSL-DETFKVWTMQRRDPSLTTPSTT-------VQQQQQGPQYM-WTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFG--------------------------GLVTLWGGAGASLLAVLLPP 840
            GR +   D  TG +  +     PV ++     G ++ T H DGSM+ W  L      A        +LS AG          P ST +HWHAH V C+A +PDG  L+SGGEE VLVQWNL +G       + FLPRLGAPL  +A+SP   + A T  DN V LV ++ W V WQ           G+AL   S   A+R  + A   E    + K+ +G     G VV NG+ GH+Q+Y+   + L    EVV  NR +         + K++               P+VEH AFSS G+R+  + +R              L FW   R S                                 G +  ++SV+ PH    AV +L YHP  D  VT    D  F +W ++R D +L + +         V+ +  G Q + W C+ +V YK GL+A  A+F SDGS+LAVA+                           G++TLW    A+LL+ LLPP
Sbjct:  356 GRDVMAVDVGTGDKAVLVTAVAPVRSLVVGGDGESLITAHLDGSMSQWHELTDRLRAAFKVLGSREVLSEAG----------PPSTDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKG------TKAFLPRLGAPLQGLAVSPGQEYAAATTMDNAVTLVGLAGWDVLWQMR---------GLAL---SRPPAIRLSSPAERAERDRQALKLTMG--PKRGIVVCNGRAGHVQFYNVGTNCLEASAEVVRVNRDTSAKSWQSDHLSKMQRGKSDGGPGGAGSVGPVVEHVAFSSDGKRMVAVASRA-------PASSPSLSFWKHARGSDPFGSNNGGYTXXXXXXXXXXXXXXXXXXXXXXGHWAADTSVENPHGPGNAVAALEYHPREDVVVTAGKQDGGFNLWGLRRTDNALESLAAAAKGGSGGVRTEGDGEQAVHWACSLSVRYKEGLAATGASFCSDGSVLAVAYSPNEEVNWDGSNGIRKGQRRGQHSTGQGVITLWSLETATLLSTLLPP 842          
BLAST of jgi.p|Trimin1|353167 vs. uniprot
Match: K8YWR9_NANGC (NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YWR9_NANGC)

HSP 1 Score: 178 bits (451), Expect = 1.660e-41
Identity = 146/433 (33.72%), Postives = 202/433 (46.65%), Query Frame = 0
Query:  450 VATGHKDGSMTVWRGL----GTAAEEAILSGAGEGGRGRAGGRP---KSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALAPTRELVDYSAKIKLGIDASSGAVVINGQPGHLQYYDPHQDLLSGVLEVVPFNRVSRVDKL-----RMAPPLVEHFAFSSSGERVATLDTREVQGEGLRQGDVRCLKFWALDRRSGR---FLLESSVDQPH----QGAVTSLCYHPLVDRAVTTSLDETFKVWTMQRRDPSLTTPSTTVQQQQQGPQYMWTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFGGLVTLWGGAGASLLAVL-----LPPLSAVGSAAARVHALAFVP 858
            +ATG  +G + +W  L    GT  ++A       GG G +  R    +S    WHAH V CLA++PDG YL SGGEE VLV   + +GG        FLPRLGA L  + +S DG  CALT   N + ++        W+         + G       ++    G   A      + S   +L      G +V N QPG LQ++D     ++G +EVV  N VSR  +      ++ PP V   A S  G R+ T++ R V   G+++     LKFW    + GR   ++L + VD+PH     G V SL YHP +D A T +    F +W                 +   G +Y W C   VA++RG S  + AFSSDG+LLAVA G  V LW   G  LL +L     L P    G   + + ALAF+P
Sbjct:  206 IATGDVEGRVFLWHTLFNPLGTRLKQAKARALQRGGPGLSHRRNALFRSEVKRWHAHGVRCLAYTPDGHYLLSGGEEAVLVVCQVSKGG----HPMTFLPRLGACLGGLTLSQDGSLCALTTLSNALRVLHPMDLKTRWEWRGMAHLSATLG-------STGGWGGRRKAKGNAYQNMSKAARLWAFGGRGRLVSNCQPGKLQFFDVECGEVAGEVEVVSSNVVSRGSEAQEEGGKLVPPWVTQAALSCDGGRMVTVEMR-VGEMGIKR---ESLKFWERAGQGGRGSPYVLRAVVDEPHGGGESGQVLSLAYHPRLDVAATCAASGDFALWARVLEAGEEGKEGRGQVEAGSGARYRWICQAHVAFERGAS-RSLAFSSDGTLLAVACGAKVALWDPEGLRLLGILTLDPALLPALPKGQEPSEIKALAFLP 622          
BLAST of jgi.p|Trimin1|353167 vs. uniprot
Match: UPI001F04E355 (WD repeat-containing protein 75-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04E355)

HSP 1 Score: 175 bits (444), Expect = 3.680e-41
Identity = 129/382 (33.77%), Postives = 191/382 (50.00%), Query Frame = 0
Query:  450 VATGHKDGSMTVWRGLGTAAEEAILSGAGEGGRGRAGGRPKSTTLHWHAHAVSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALAPTRELVDYSAKIKLGIDASSGAVVINGQPGHLQYYDPHQDLLSGVLEVVPFNRVSRVDKLRMAPPLVEHFAFSSSGERVATLDTREVQGEGLRQGDVRCLKFWALDRRSGRFLLESSVDQPHQGAVTSLCYHPLVDR---AVTTSLDETFKVWTMQRRDPSLTTPSTTVQQQQQGPQYM--WTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFGGLVTLW 826
            +ATGH +G + +W+ +   +E                  P  + LHWHAH+V+ L FS DG YLYSGGEE VLV W +       + ++ F PRLGAP+  I  S D    A++  DN + LV     AV+                   +S    ++GL    TR    YS  +    D  S ++V+N + G LQ+Y P  D LS  L++V  N +SR+    +   +VEH  FS  G  +AT++ R+   +G    + R LKFW  +++S R +L + +D PH+G V S+ + P   +   A++ S+D  FK+W               V+QQ    +Y+  W C ++V Y R      AAFSSDGSLLAV +G ++TLW
Sbjct:  211 IATGHDNGKIFIWKNIKLDSE------------------PIRSKLHWHAHSVASLKFSHDGAYLYSGGEESVLVFWQVD------SNHKQFKPRLGAPIAHICNSDDDALIAVSHVDNVINLVS----AVD-------------------LSVVNVVQGL----TRANKVYSGLVA---DPCSKSLVLNNKDGSLQFYRPETDCLSFTLDIVQQNYISRLKNTPLQLIVVEHVKFSDDGSWLATIERRD---DGKMTPENR-LKFWKYNKKSQRHVLNTCIDPPHEGKVISMEFQPGTSKTQLAMSASIDGKFKIWI--------------VKQQHDINEYLESWHC-QSVGYFRDEPVSDAAFSSDGSLLAVVYGKVITLW 519          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353167 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z938_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Y2GCT4_9FUNG2.070e-4534.88Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A1Y1YRQ1_9FUNG8.860e-4536.13WD40 repeat-like protein n=1 Tax=Basidiobolus meri... [more]
A0A261Y783_9FUNG5.570e-4437.90Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
A0A197JLM2_9FUNG1.210e-4334.29WD40 repeat-like protein n=1 Tax=Linnemannia elong... [more]
A0A7S1CJE4_9STRA5.980e-4335.19Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A8H7BS11_9FUNG9.880e-4335.17WD repeat-containing protein 75 n=1 Tax=Apophysomy... [more]
A0A6H5KD90_9PHAE2.280e-4231.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K8YWR9_NANGC1.660e-4133.72NET1-associated nuclear protein 1 (U3 small nucleo... [more]
UPI001F04E3553.680e-4133.77WD repeat-containing protein 75-like n=1 Tax=Xenia... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1164..1184
NoneNo IPR availableCOILSCoilCoilcoord: 268..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1117..1147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..270
NoneNo IPR availablePANTHERPTHR44215WD REPEAT-CONTAINING PROTEIN 75coord: 129..194
coord: 438..1088
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 156..191
score: 9.99469
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 494..530
score: 9.915599
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 487..526
e-value: 2.1E-5
score: 33.9
coord: 788..827
e-value: 130.0
score: 3.6
coord: 723..763
e-value: 0.35
score: 19.9
coord: 149..189
e-value: 4.0E-6
score: 36.3
coord: 425..463
e-value: 3.5
score: 13.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 152..189
e-value: 0.018
score: 15.9
coord: 494..526
e-value: 4.6E-4
score: 20.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 156..191
score: 11.978851
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 494..530
score: 11.878597
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 731..772
score: 9.773251
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..107
e-value: 2.4E-7
score: 32.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..84
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 614..919
e-value: 1.4E-11
score: 46.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 119..246
e-value: 7.2E-11
score: 43.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 387..613
e-value: 7.9E-17
score: 63.2
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 122..818
IPR011044Quinoprotein amine dehydrogenase, beta chain-likeSUPERFAMILY50969YVTN repeat-like/Quinoprotein amine dehydrogenasecoord: 675..906

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_147contigContig_147:228545..243733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353167mRNA_16827Tribonema minus UTEX_B_3156 mRNAContig_147 228545..243733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353167|estExt_Genemark1.C_Ctg_1470020 ID=Trimin1|353167|estExt_Genemark1.C_Ctg_1470020|Name=jgi.p|Trimin1|353167|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1403bp
MLDGRPSSALPLLTRALTLRPTNAAVLGLRSLARERCGLTASATSDARAI
VLLQPRNSGGYVRLASVCLAANDYPSAACVAFRGMRCGDTHRNGELAAIM
AKARAQGHLPPVPWTPVGWAEAAMWRLRADGKVMYCGCSSSIKAIGVDTG
EQLLRLAGHKLEVTALVLHPADADVLLSSSQDGTVRQWNVKLGADGDESS
RCLKVFNLESAVHYLMIAPRLASEESAAAAVYALVAPRKSQQPAQRAKPP
VAADAVKGSKKRKLPPAADEAQEEAGEAQDEEQEESNKSVKKSKRKKGEA
GVDGGGGEPQPEDTPDGGSSPAAAKRNGTKGKAEEQKDEGSQSVKKSKRK
KGVADGGGGGEPEPVDAADGGSSPPAAKPKSGQRKAGSDVGVWKIVRVDL
NRSSGRRWTAATLNKGRALQITDAVTGARHTMPAGQWPVTAVTASCSGAV
ATGHKDGSMTVWRGLGTAAEEAILSGAGEGGRGRAGGRPKSTTLHWHAHA
VSCLAFSPDGGYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTR
IAMSPDGLFCALTLEDNCVALVRISTWAVEWQDNCVALKRTSAGVALVLI
STSAALRGLALAPTRELVDYSAKIKLGIDASSGAVVINGQPGHLQYYDPH
QDLLSGVLEVVPFNRVSRVDKLRMAPPLVEHFAFSSSGERVATLDTREVQ
GEGLRQGDVRCLKFWALDRRSGRFLLESSVDQPHQGAVTSLCYHPLVDRA
VTTSLDETFKVWTMQRRDPSLTTPSTTVQQQQQGPQYMWTCTRTVAYKRG
LSAEAAAFSSDGSLLAVAFGGLVTLWGGAGASLLAVLLPPLSAVGSAAAR
VHALAFVPRTALLFAQRAGAATLTDVVAATTSTSTSDGDAPAPSSSSGTV
WAYKGKIACACAATAAAAVMAAPGGGGATAAAAAAFCLQRSASSSLVLLM
GRSSAVPLCAWHLPSDVLHSMVLIGSSGSGGGGAERGGGVVGLTRGGDVL
LLSTGGSSSGEAQLDATGVRRIGGAAAAPALPLRAAAAAAPRAGAAAVVV
HRSAGIEALFRDMPTSDLPPATELLGAFMRAQLRPAPAEAPPWSAAAGAA
AAAAAAASARALLQQQGGGEVAWGAEDGESDEGEGENEGKGGGTAGLTGG
ADTVLLEMFKDYFKEEAAKEKKSKKKNKERTELSADSACSAAEVPVADPT
MPIDEAKAAALALAHTKDSARLPDIVKSLEKQFSSEPIHTVDFFNLAISG
EWDVVHSTLYPKRAPAAVVSSEDLTVRSLRQTITPSDGGNPREGEITTAV
EWELPEQGITGTFEVVAQYLTGDNSSMKLTTTGHRLKPSSMPSDPQGLVE
LLQRHMPFELFDPDEQAVFTTYVDHDMRIVWAAGGRTGANGSRIIFLRHH
SQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR011990TPR-like_helical_dom_sf
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf
IPR011044Quino_amine_DH_bsu