Trimin1|353155|estExt_Genemark1.C_Ctg_1460032 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353155
Unique NameTrimin1|353155|estExt_Genemark1.C_Ctg_1460032
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1040
Homology
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BLAST of jgi.p|Trimin1|353155 vs. uniprot
Match: A0A836CKA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKA6_9STRA)

HSP 1 Score: 1093 bits (2827), Expect = 0.000e+0
Identity = 1039/1039 (100.00%), Postives = 1039/1039 (100.00%), Query Frame = 0 
Query:    1 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 1039
            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
Sbjct:    1 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 1039
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353155 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CKA6_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 498..776
e-value: 5.8E-10
score: 40.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 499..702
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 925..1039
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 983..1008
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_146contigContig_146:308143..315265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353155mRNA_16157Tribonema minus UTEX_B_3156 mRNAContig_146 308143..315493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353155|estExt_Genemark1.C_Ctg_1460032 ID=Trimin1|353155|estExt_Genemark1.C_Ctg_1460032|Name=jgi.p|Trimin1|353155|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1040bp
MQALLSDGFQVLSSVTFGATGEIISERGTAHHGSSNGAGGGGGAAAAAAA
AGKGSRPPSGCTAAAHPRRASHSSPPLPPDNSSGLVIGMRHSASVPHLHL
PPTAAAAAAAAAAAAEAAAAAAGGRGTSPALNGLGGGGVERRAAESADVA
AQMRRCTTAPGALHHETDALPPQQHKRRRSSDGSDADAAGSLILMGNGGG
AAAAAARGGMGCAGGSSGSLSSSGGMMDAPSPLHGAMPPPQSTMPSPGLY
PQHGPGGSRVAGQRPIRPRISLRVASGTAGGGSGGAAAAAAAANAAPKLL
PAQQQAQKPAVTVAVGGAMNGVQHSQSQQLQPPLFKRPTISLSVRRHGGG
SNGSTPSSTSSGRSSSNGFGNSGGGGGAAQCSATSWSPPRSRPSPAGSSS
GGGAAAAVLADAALVARLAAFQDGAPRVAIAANAAALAAAGHASLVRDRC
AHGERVAPSRAALPLAALGGGGSGGGGVALLDALYDAAGARGGSGVLTLQ
AAVARGDVAAARWALERCDRAAAAAAGVGCVIAAAARGDGAMLQWLASSG
VSTPAVPRALEEAAKGGHVAAVHWLVTQQSESVMRSSAHWLVTQGCIPDA
AAISAAAAAGHTAVVHKLLLLAGPTAALSLGSAALAAACGAGQLELARWL
WGVGGAALDAASALNAALGRGQWEAARFLLLRAGEALAAALRRGQWEAAR
FLLLRARRRWRSAVGAAAAEAHNAVAAVLNAVSALNAALDRGQREAARFL
LLRGREALANACAAAREGGAGVGARTHGAAAEVADAAAAVRDAAAELSGG
VRCRRRGQGGAIRGAAAAVRGSYRAARVCTLAAAAVARRCVGTGGGHAHD
PHVKQRSGISSAAAAAAAAPAAAAQLDGCGLYLPVYAARSVKRQRPAASP
AHAGNRQRCPLRRLVVVRNLESLYSKSKYPPTDEDPKGKGPPAAGEALPA
AAEGGANASHRPSAESEERDSFSKAAISGGVEGAREKVEKGTAPGEKAKE
KMEDMINSAIHTVEKAMPGSNKDLPDRDFTPPPPKKGSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf