mRNA_16157 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353155
Unique Name	mRNA_16157
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|353155 vs. uniprot
Match: A0A836CKA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKA6_9STRA)

HSP 1 Score: 1094 bits (2830), Expect = 0.000e+0
Identity = 1039/1039 (100.00%), Postives = 1039/1039 (100.00%), Query Frame = 1

Query:    1 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 3117
            MQALLSDGFQVLSSVTFGATGEIISERGTAHHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSSGLVIGMRHSASVPHLHLPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGMGCAGXXXXXXXXXXXMMDAPSPLHGAMPPPQSTMPSPGLYPQHGPGGSRVAGQRPIRPRISLRVASGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGVQHSQSQQLQPPLFKRPTISLSVRRHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLADAALVARLAAFQDGAPRVAIAANAAALAAAGHASLVRDRCAHGERVAPSRAALPLAALGGXXXXXXXVALLDALYDAAGARGGSGVLTLQAAVARGDVAAARWALERCDRAAAAAAGVGCVIXXXXXXDGAMLQWLASSGVSTPAVPRALEEAAKGGHVAAVHWLVTQQSESVMRSSAXXXXXQGCIPDAAAISAAAAAGHTAVVHKLLLLAGPTAALSLGSAALAAACGAGQLELARWLWGVGGAALDAASXXXXXXXXXXXXXXXFLLLRAGEXXXXXXXXXXXXXXXXXXXXXRRRWRSAVGAAAAEAHNAVAAVLNAVXXXXXXXXXXXXXXXXXXXXXXXXXXANACAAAREGGAGVGARTHGAAAEVADXXXXXXXXXXXXSGGVRCRRRGQGXXXXXXXXXXXXXYRAARVCTLAAAAVARRCVGTGGGHAHDPHVKQRSGISSAXXXXXXXXXXXAQLDGCGLYLPVYAARSVKRQRPAASPAHAGNRQRCPLRRLVVVRNLESLYSKSKYPPTDEDPKGKGPPAAGEALPAAAEGGANASHRPSAESEERDSFSKAAISGGVEGAREKVEKGTAPGEKAKEKMEDMINSAIHTVEKAMPGSNKDLPDRDFTPPPPKKGSS
Sbjct:    1 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 1039

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353155 vs. uniprot

BLAST of jgi.p|Trimin1|353155 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CKA6_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_146	contig	Contig_146:308143..315493 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353155\|estExt_Genemark1.C_Ctg_1460032
Hectar predicted targeting category	other localisation
TranscriptId	353477
Track	FilteredModels1
ProteinId	353155

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353155	gene_16157	Tribonema minus UTEX_B_3156	gene	Contig_146 308143..315493 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353155	Trimin1\|353155\|estExt_Genemark1.C_Ctg_1460032	Tribonema minus UTEX_B_3156	polypeptide	Contig_146 308143..315265 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16157_1	exon_16157_1	Tribonema minus UTEX_B_3156	exon	Contig_146 308143..309774 +
exon_16157_2	exon_16157_2	Tribonema minus UTEX_B_3156	exon	Contig_146 310231..310332 +
exon_16157_3	exon_16157_3	Tribonema minus UTEX_B_3156	exon	Contig_146 310654..310701 +
exon_16157_4	exon_16157_4	Tribonema minus UTEX_B_3156	exon	Contig_146 311329..311609 +
exon_16157_5	exon_16157_5	Tribonema minus UTEX_B_3156	exon	Contig_146 311688..311900 +
exon_16157_6	exon_16157_6	Tribonema minus UTEX_B_3156	exon	Contig_146 311977..312252 +
exon_16157_7	exon_16157_7	Tribonema minus UTEX_B_3156	exon	Contig_146 312720..312905 +
exon_16157_8	exon_16157_8	Tribonema minus UTEX_B_3156	exon	Contig_146 313673..313794 +
exon_16157_9	exon_16157_9	Tribonema minus UTEX_B_3156	exon	Contig_146 314032..314174 +
exon_16157_10	exon_16157_10	Tribonema minus UTEX_B_3156	exon	Contig_146 315149..315493 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16157	CDS_16157	Tribonema minus UTEX_B_3156	CDS	Contig_146 308143..309774 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_16157	UTR3_16157	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_146 315266..315493 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_146:308143..315493+
coding sequence from alignment at Contig_146:308143..315493+

spliced messenger RNA

>mRNA_16157 ID=mRNA_16157|Name=jgi.p|Trimin1|353155|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3348bp|location=Sequence derived from alignment at Contig_146:308143..315493+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAGCGCTGCTCTCGGATGGCTTCCAGGTCCTCAGTAGTGTCACATT
TGGCGCCACGGGCGAGATCATCAGCGAGCGTGGCACCGCCCACCACGGCA
GCAGCAACGGCGCCGGCGGCGGCGGCGGCGCAGCGGCGGCGGCGGCAGCG
GCGGGCAAGGGCAGCCGACCCCCAAGCGGTTGCACTGCCGCCGCCCACCC
ACGCAGGGCATCTCATTCATCGCCGCCGCTGCCGCCTGACAACAGCTCAG
GACTGGTGATAGGCATGCGGCACAGCGCGTCGGTGCCGCACCTGCACCTG
CCGCCGACCGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAAGC
GGCGGCGGCGGCGGCAGGGGGCCGCGGTACAAGCCCCGCGCTGAATGGGC
TCGGCGGCGGCGGCGTGGAGCGCAGGGCAGCGGAGAGCGCAGATGTGGCG
GCGCAGATGCGGCGCTGCACGACGGCGCCCGGCGCGCTGCACCACGAGAC
GGACGCGCTGCCGCCGCAGCAGCACAAGCGACGCCGCTCAAGCGACGGCA
GCGACGCGGACGCCGCGGGCTCTCTCATTCTCATGGGCAATGGGGGTGGC
GCTGCCGCCGCCGCCGCGCGCGGCGGCATGGGCTGCGCCGGCGGCAGCAG
CGGCAGCCTCAGCAGCAGCGGCGGCATGATGGATGCGCCGTCGCCCCTGC
ACGGCGCGATGCCGCCGCCACAGTCGACCATGCCGTCCCCGGGTCTGTAC
CCGCAGCACGGCCCCGGGGGGAGCAGAGTTGCAGGCCAGCGGCCCATACG
CCCACGCATCAGCCTGCGCGTTGCGTCGGGGACGGCCGGCGGCGGCAGTG
GCGGAGCAGCAGCAGCAGCAGCGGCGGCGAATGCGGCGCCGAAGCTGCTG
CCCGCGCAGCAGCAGGCGCAGAAACCCGCGGTGACGGTGGCAGTGGGGGG
TGCGATGAACGGCGTGCAGCACTCGCAGTCGCAGCAGCTGCAGCCGCCGC
TCTTCAAGCGGCCCACGATCTCGCTCAGCGTGCGCAGGCACGGCGGCGGC
AGCAACGGCAGCACCCCTAGCAGTACCAGCAGCGGGCGGAGCTCCTCTAA
CGGCTTCGGGAACAGCGGCGGTGGCGGCGGCGCTGCGCAGTGCAGCGCGA
CCAGCTGGAGCCCGCCGCGCTCGCGTCCGTCGCCCGCTGGCAGCAGCAGC
GGCGGCGGCGCGGCGGCGGCGGTGCTGGCGGACGCGGCGCTCGTGGCGCG
GCTGGCGGCATTCCAGGACGGCGCGCCACGCGTCGCCATCGCGGCGAACG
CCGCGGCGCTGGCGGCGGCTGGCCACGCGTCGCTCGTGCGCGACCGCTGC
GCGCACGGCGAGCGCGTGGCGCCGAGCCGCGCGGCGCTGCCGCTGGCGGC
GCTCGGCGGCGGCGGCAGCGGCGGCGGCGGCGTGGCGCTGCTGGACGCGC
TGTACGACGCGGCGGGCGCGCGCGGCGGGAGCGGCGTGCTGACACTGCAG
GCGGCGGTGGCGCGCGGCGACGTCGCGGCGGCGCGCTGGGCACTAGAGCG
CTGCGACCGCGCGGCGGCGGCGGCGGCAGGCGTCGGGTGCGTGATCGCGG
CCGCGGCGCGCGGCGACGGCGCCATGCTGCAGTGGCTCGCATCATCCGGC
GTGAGCACGCCCGCGGTGCCCAGGGCGCTGGAGGAGGCTGCGAAGGGCGG
GCACGTCGCCGCGGTGCACTGGCTGGTCACGCAGCAGTCGGAGTCGGTGA
TGCGCAGCTCGGCGCACTGGCTGGTCACGCAGGGCTGCATCCCCGACGCC
GCCGCCATCAGCGCCGCCGCCGCCGCCGGCCACACAGCCGTTGTCCACAA
GCTGCTGCTGCTCGCGGGCCCCACAGCAGCGCTCTCCCTCGGCAGCGCGG
CGCTCGCGGCGGCGTGCGGCGCAGGGCAGCTGGAGCTCGCGCGCTGGCTG
TGGGGCGTCGGCGGCGCGGCGCTGGATGCTGCGTCAGCTCTCAATGCCGC
GCTCGGCCGCGGCCAGTGGGAGGCCGCGCGGTTCCTGCTGCTGCGCGCGG
GGGAGGCGCTGGCCGCTGCGCTCCGCCGCGGCCAGTGGGAGGCCGCGCGC
TTCCTGCTGCTACGCGCGAGGAGGCGCTGGCGTAGTGCAGTGGGGGCGGC
GGCGGCGGAGGCGCACAACGCGGTAGCAGCAGTGCTCAACGCCGTGTCAG
CGCTCAACGCCGCGCTCGACCGCGGCCAGCGGGAGGCCGCGCGCTTCCTG
TTGCTGCGCGGACGGGAGGCGCTGGCCAACGCGTGTGCTGCTGCGCGCGA
GGGAGGCGCTGGCGTAGGCGCGCGCACTCACGGTGCGGCGGCGGAGGTAG
CGGACGCGGCAGCAGCAGTGCGCGACGCTGCGGCGGAGCTCAGCGGCGGC
GTGCGCTGCCGGCGGCGGGGGCAAGGAGGAGCGATTCGAGGCGCTGCTGC
TGCGGTGCGGGGCAGCTACCGGGCTGCGCGTGTGTGCACGCTCGCAGCGG
CAGCGGTCGCGCGGCGCTGCGTGGGCACTGGTGGCGGGCATGCGCATGAC
CCGCACGTGAAGCAGCGGAGCGGCATCAGCAGCGCAGCGGCGGCAGCGGC
AGCGGCACCAGCGGCGGCGGCGCAGCTCGACGGCTGCGGCTTATACCTAC
CCGTATACGCCGCGCGCTCTGTCAAGCGGCAGCGCCCCGCAGCATCACCC
GCGCACGCGGGCAACAGGCAACGTTGCCCGCTGCGGCGGCTGGTCGTCGT
GCGGAACCTGGAATCCCTCTACAGCAAGTCCAAATACCCTCCCACAGACG
AGGATCCGAAGGGAAAAGGCCCGCCAGCTGCAGGAGAAGCTCTCCCGGCA
GCCGCTGAAGGTGGTGCGAATGCCTCTCACAGGCCCTCCGCCGAGAGCGA
AGAGAGGGACTCATTTTCCAAGGCAGCCATTAGCGGCGGAGTCGAGGGTG
CCCGCGAGAAGGTGGAGAAGGGAACAGCACCAGGGGAGAAGGCGAAGGAG
AAAATGGAGGACATGATCAACTCGGCCATCCACACTGTGGAGAAGGCCAT
GCCAGGCAGCAACAAGGACCTGCCAGACAGGGACTTTACCCCGCCGCCGC
CCAAGAAGGGCAGCAGTTGAAGAAGTGGAGCGTTACACTTGAAGAAGTGG
AGCGCCACGCTTTACCATCAACAGGGCGCGAGCGATCTGACGTGGGGTCT
CAGGCGCGATGTTTGTGATATACTTAGTCCCCAGTACCTACCCTCCCCAG
CTTCCCGCGAGGTACTGAGGAGTGACTATATCGATCTGCGCAACCGTAGT
GACAGGGCTCGCGCGAGCGTGCTGCTGTAGAGCGGTGCTGCGTACGCA

protein sequence of jgi.p|Trimin1|353155

>Trimin1|353155|estExt_Genemark1.C_Ctg_1460032 ID=Trimin1|353155|estExt_Genemark1.C_Ctg_1460032|Name=jgi.p|Trimin1|353155|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1040bp
MQALLSDGFQVLSSVTFGATGEIISERGTAHHGSSNGAGGGGGAAAAAAA
AGKGSRPPSGCTAAAHPRRASHSSPPLPPDNSSGLVIGMRHSASVPHLHL
PPTAAAAAAAAAAAAEAAAAAAGGRGTSPALNGLGGGGVERRAAESADVA
AQMRRCTTAPGALHHETDALPPQQHKRRRSSDGSDADAAGSLILMGNGGG
AAAAAARGGMGCAGGSSGSLSSSGGMMDAPSPLHGAMPPPQSTMPSPGLY
PQHGPGGSRVAGQRPIRPRISLRVASGTAGGGSGGAAAAAAAANAAPKLL
PAQQQAQKPAVTVAVGGAMNGVQHSQSQQLQPPLFKRPTISLSVRRHGGG
SNGSTPSSTSSGRSSSNGFGNSGGGGGAAQCSATSWSPPRSRPSPAGSSS
GGGAAAAVLADAALVARLAAFQDGAPRVAIAANAAALAAAGHASLVRDRC
AHGERVAPSRAALPLAALGGGGSGGGGVALLDALYDAAGARGGSGVLTLQ
AAVARGDVAAARWALERCDRAAAAAAGVGCVIAAAARGDGAMLQWLASSG
VSTPAVPRALEEAAKGGHVAAVHWLVTQQSESVMRSSAHWLVTQGCIPDA
AAISAAAAAGHTAVVHKLLLLAGPTAALSLGSAALAAACGAGQLELARWL
WGVGGAALDAASALNAALGRGQWEAARFLLLRAGEALAAALRRGQWEAAR
FLLLRARRRWRSAVGAAAAEAHNAVAAVLNAVSALNAALDRGQREAARFL
LLRGREALANACAAAREGGAGVGARTHGAAAEVADAAAAVRDAAAELSGG
VRCRRRGQGGAIRGAAAAVRGSYRAARVCTLAAAAVARRCVGTGGGHAHD
PHVKQRSGISSAAAAAAAAPAAAAQLDGCGLYLPVYAARSVKRQRPAASP
AHAGNRQRCPLRRLVVVRNLESLYSKSKYPPTDEDPKGKGPPAAGEALPA
AAEGGANASHRPSAESEERDSFSKAAISGGVEGAREKVEKGTAPGEKAKE
KMEDMINSAIHTVEKAMPGSNKDLPDRDFTPPPPKKGSS*

mRNA from alignment at Contig_146:308143..315493+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16157 ID=mRNA_16157|Name=jgi.p|Trimin1|353155|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7351bp|location=Sequence derived from alignment at Contig_146:308143..315493+ (Tribonema minus UTEX_B_3156 )
ATGCAAGCGCTGCTCTCGGATGGCTTCCAGGTCCTCAGTAGTGTCACATT
TGGCGCCACGGGCGAGATCATCAGCGAGCGTGGCACCGCCCACCACGGCA
GCAGCAACGGCGCCGGCGGCGGCGGCGGCGCAGCGGCGGCGGCGGCAGCG
GCGGGCAAGGGCAGCCGACCCCCAAGCGGTTGCACTGCCGCCGCCCACCC
ACGCAGGGCATCTCATTCATCGCCGCCGCTGCCGCCTGACAACAGCTCAG
GACTGGTGATAGGCATGCGGCACAGCGCGTCGGTGCCGCACCTGCACCTG
CCGCCGACCGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAAGC
GGCGGCGGCGGCGGCAGGGGGCCGCGGTACAAGCCCCGCGCTGAATGGGC
TCGGCGGCGGCGGCGTGGAGCGCAGGGCAGCGGAGAGCGCAGATGTGGCG
GCGCAGATGCGGCGCTGCACGACGGCGCCCGGCGCGCTGCACCACGAGAC
GGACGCGCTGCCGCCGCAGCAGCACAAGCGACGCCGCTCAAGCGACGGCA
GCGACGCGGACGCCGCGGGCTCTCTCATTCTCATGGGCAATGGGGGTGGC
GCTGCCGCCGCCGCCGCGCGCGGCGGCATGGGCTGCGCCGGCGGCAGCAG
CGGCAGCCTCAGCAGCAGCGGCGGCATGATGGATGCGCCGTCGCCCCTGC
ACGGCGCGATGCCGCCGCCACAGTCGACCATGCCGTCCCCGGGTCTGTAC
CCGCAGCACGGCCCCGGGGGGAGCAGAGTTGCAGGCCAGCGGCCCATACG
CCCACGCATCAGCCTGCGCGTTGCGTCGGGGACGGCCGGCGGCGGCAGTG
GCGGAGCAGCAGCAGCAGCAGCGGCGGCGAATGCGGCGCCGAAGCTGCTG
CCCGCGCAGCAGCAGGCGCAGAAACCCGCGGTGACGGTGGCAGTGGGGGG
TGCGATGAACGGCGTGCAGCACTCGCAGTCGCAGCAGCTGCAGCCGCCGC
TCTTCAAGCGGCCCACGATCTCGCTCAGCGTGCGCAGGCACGGCGGCGGC
AGCAACGGCAGCACCCCTAGCAGTACCAGCAGCGGGCGGAGCTCCTCTAA
CGGCTTCGGGAACAGCGGCGGTGGCGGCGGCGCTGCGCAGTGCAGCGCGA
CCAGCTGGAGCCCGCCGCGCTCGCGTCCGTCGCCCGCTGGCAGCAGCAGC
GGCGGCGGCGCGGCGGCGGCGGTGCTGGCGGACGCGGCGCTCGTGGCGCG
GCTGGCGGCATTCCAGGACGGCGCGCCACGCGTCGCCATCGCGGCGAACG
CCGCGGCGCTGGCGGCGGCTGGCCACGCGTCGCTCGTGCGCGACCGCTGC
GCGCACGGCGAGCGCGTGGCGCCGAGCCGCGCGGCGCTGCCGCTGGCGGC
GCTCGGCGGCGGCGGCAGCGGCGGCGGCGGCGTGGCGCTGCTGGACGCGC
TGTACGACGCGGCGGGCGCGCGCGGCGGGAGCGGCGTGCTGACACTGCAG
GCGGCGGTGGCGCGCGGCGACGTCGCGGCGGCGCGCTGGGCACTAGAGCG
CTGCGACCGCGCGGCGGCGGCGGCGGCAGGCGTCGGGTGCGTGATCGCGG
CCGCGGCGCGCGGCGACGGCGCCATGCTGCAGGTGCGTGCGCGGCGCAGC
AGGGGCGTGTCGAGATGCCGCTGGCATGTCTAAGGCGGTGTTGCGGGTGA
CAGCGGCCCCCGAAACGCGAACGACATGCATCCTTGTTTCAACAGTACCT
CTGTAGAAGTACCAGACCCGACGGCTCACATGCGCTGGTCTCTACCGCGC
GACAGCAAGGTGCTGACTCACTCACGCCCGCCTTCGCTGTATTTAGCGCG
CTCCCAGCGCTGCCTGCACCGCTCACTATCACATCCGCACAGCTCACCGC
CGCGCTATCTTCACAGGCTCAGCTAAACCGCGCCCCACCTACTTTTTACC
GCACGCGGCTGCTGCCCTGCAGCGGCCCGCGTCCGCCTGCGTGCGTCCGC
GCTGCTCACTGCCACCGTTTGCGCGGCTCCGCACTGAGTTGCTGCTTGCT
GCCACGCGCTGTGCTGATGGCTGCTGCTGCGCGCGCAGTGGCTCGCATCA
TCCGGCGTGAGCACGCCCGCGGTGCCCAGGGCGCTGGAGGAGGCTGCGAA
GGGCGGGCACGTCGCCGCGGTGCACTGGCTGGTCACGCAGGTACGTACAG
TAGGTATGATGCTTCAATAGTCGGAGCTGGTGATGCTCAGGTCGCGCAGG
GGACAGGCACGTCGCCGCGGTGCACTGGCTGGTCTCGCAGGTGCGCACGT
ACAGTAGGTATGATGCCTCAATATTTGGAGCTGATGATGCTCAGCTCGCG
AAGGTGGCGGGCACGTCGCCGCGGTGCACTGGCTGGTCACGCAGGTGCGC
AAGGTATTGTGCCGCAGCAGTCGGAGTCAGTGATGCTCAATTCGTGAAGG
GCGGGCACGTCGCTGCTGTGCACTGGCTGGTCACACAGGTATGTACGGTA
TTGTGCTGCAGCAGTCGGAGTCGGTGATGCGCAGCTCGGCGCACTGGCTG
GTCACGCAGGTGCGGTATTGTGCTGCAGCAGTCGGAGTCGGTGATGCTCA
GCTTGTGAAGGGCGGGCACGTCGCCGCGGCAGTACGTATGATGAGGTATG
TACAGTAGGTACGATGCCTCAGCAGTCTGGTGTCAGCGTGTCAGCCCGTG
GCCTGTATTGGCCTGGCAGTGCAGGGGGGGGGGGGGGGGGGGGGGACGAT
CAACAGGTATCAGGTATGGCACGGCAGGAGGGCCGACGAGCGTTTTTATC
AGCGCTCAGCGACCTGCAGCTTCCCGCCAGTGCGACAGCGCAGCGGCGCG
CAGCAAGGCGTGCCCCTGCACCCCCTCTGACTGCAATGCCAGGGGTTTGA
GCGCCTCTGCCCGCCCATACCCTTTGCTCACCGCCCAGATCGTCACGCAT
CCCGCTCGCCACATGGGCACGCCAACAGCACAGCGCCACCGCTCACGTGC
CCCCCCCCCCCCCCCCCCTCAACCTCCCGCACGTCTGCGCAATCCTCACC
TTATCCCCCCTGCTCCTCTGATCCCTCATGTCTCGTCCCCTTGTCACCCT
CTCACTCGCCTTCTAATCCACCCCCCTCTCACTCCCCTTCCAATCCCTCC
CCGTCGCCCCGCCCCCCCCCATGCCCCCAATCGCAGGGCTGCATCCCCGA
CGCCGCCGCCATCAGCGCCGCCGCCGCCGCCGGCCACACAGCCGTTGTCC
ACAAGCTGCTGCTGCTCGCGGGCCCCACAGCAGCGCTCTCCCTCGGCAGC
GCGGCGCTCGCGGCGGCGTGCGGCGCAGGGCAGCTGGAGCTCGCGCGCTG
GCTGTGGGGCGTCGGCGGCGCGGCGCTGGATGCTGCGTCAGCTCTCAATG
CCGCGCTCGGCCGCGGCCAGTGGGAGGCCGCGCGGTTCCTGCTGCTGCGC
GCGGGGGAGGCGCTGGCGTAGCGCAGCGGGGGGCGGCGGCGGCGGAGGCG
GCGAGGCGCGGCGGCAGCAGTGCTCGATGTTGCGTCAGCGCTCAGCGCTG
CGCTCCGCCGCGGCCAGTGGGAGGCCGCGCGCTTCCTGCTGCTACGCGCG
AGGAGGCGCTGGCGTAGTGCAGTGGGGGCGGCGGCGGCGGAGGCGCACAA
CGCGGTAGCAGCAGTGCTCAACGCCGTGTCAGCGCTCAACGCCGCGCTCG
ACCGCGGCCAGCGGGAGGCCGCGCGCTTCCTGTTGCTGCGCGGACGGGAG
GCGCTGGCGTAGCGCAGCGGGGGCGGCGGCGGCAGAGGCGCGGAACGCGG
TGGCAGCAGTGCTCGACGCTGCGGCAGGGCTCAGCAACGCGTGTGCTGCT
GCGCGCGAGGGAGGCGCTGGCGTAGGCGCGCGCACTCACGGTGCGGCGGC
GGAGGTAGCGGACGCGGCAGCAGCAGTGCGCGACGCTGCGGCGGAGCTCA
GCGGCGGCGTGCGCTGCCGGCGGCGGGGGCAAGGAGGAGCGATTCGAGGC
GCTGCTGCTGCGGTGCGGGGCAGCTACCGGGCTGCGCGTGTGTGCACGCT
CGCAGCGGCAGCGGTCGCGCGGCGCTGCGTGGGCACTGGTGGCGGGCATG
CGCATGACCCGTAGCGCTCCCTGGCGTACTAGAAGAGCGTTGTGGCACCA
AACTTCAAGTGACGGCGTGGCGCGCGTGCGCAGCGCTCAGCACTGGGGGG
GGTTGAGGTGTGTCCCCCATATTGTCATGGAGGCCGCGGTGCCGCGCATC
GCATCAGTGCTCGAGCACTGAAAACAGTCAGACGGCTGGTTGTGTGCTGG
TGTTGTAGAAGGAAGGGAGTCGCCTGGGTGGAGGTGTGAAACCCGACAAA
CAGCAGCAGTGCTCGGGGCAGCAGCTGCAGCGCGGGGGGGGGGGGGAGTT
CAGGTTTGTGGCTCCTCCTCCCCACTACTTGAGCATGGCAGCTGCAGTCG
ACAACATGGACACTGAACGAAGGATCAACAAATTTACCGTAGCGAATGTA
CGGCAACTGTTACTTAGAGCGGTAGTGCGCAGGCACAGGCGGCGCCTTCT
GCTCGCGCTTGGTACGCGCGACGGCAGGCACGTGAAGCAGCGGAGCGGCA
TCAGCAGCGCAGCGGCGGCAGCGGCAGCGGCACCAGCGGCGGCGGCGCAG
CTCGACGGCTGCGGCTTATACCTACCCGTATACGCCGCGCGCTCTGTCAA
GCGGCAGCGCCCCGCAGCATCACCCGCGCACGCGGGCAACAGGCAACGTT
GCCCGCTGCGGCGGTTGAGCGCTGAGTTGCGCGCCCGCCACACACGCGCG
CGCATTTCCGTTCCCAACTGTATTCTTAGGCCCCCGTGGTGGCGCAGTGG
CCGCATGTGCACGTCAGGAGTTTGTGTGAGAATGCCCGCTTCACAGGGGT
GTGCTGTACTTGACGGGCGCGCGCCGGTTCCCTGCCCGCAGCCTGTGCGC
TCTCTGCACAGCTTGCGGCGCGGATGGGCACCGGGGGCGCGTTGCCTTGA
GAGGGGGTACACAATCACTGGCGTTGCACATTTGCTGTGCAATACGTCAG
AGTGTGCCGACCGCAGACTGTTTTGACAATGAACGATGCGTGCATAACTT
CGCGCCCTCTGCGGATTGTTTGCTGCTCAGCTGACTGTCGGTGTCTATCA
TGACCCCGTCCGATTGCATCGGGTTGAGCCAACGGCAGGTTTCTGTGCAA
GGCAGGCATGTGTTGCCGACACTGTTGCGAGGACATGACCACACATGCAC
AGAGACTTAGCAGGGGGGTTGCTGGGAAGGTTCTCCGGGAGTGCCTTCCG
GGAACTGTCCCGGGAGTGTGTGTATTCCACTTGGTTGCATCAGGCAAAAA
CATACCGACGACCAGCGATCGTCACGGATAGCGGCCGACAAAGCACTGCA
CAGCTGTCTATTTCCTCCCACACGCCGACCGAAACGCGCCAGCGTCTCCA
GCACGGCCGCAAACACAGAAATCGAAGATGCTCTCCCTCGCACAGGCAAC
GCGTTCCGCTTACCTGCGCCCGTGCGGCAGGCTGGTCGTCGTGCGGAACC
TGGAATCCCTCTACAGCAAGTCCAAATACCCTCCCACAGACGAGGATCCG
AAGGGAAAAGGCCCGCCAGCTGCAGGAGAAGCTCTCCCGGCAGCCGCTGA
AGGTGCGCTGACTGACCTGACAAAGAGCGTTCTGTCTTGCCCAGAACATC
ACCGTCTTCGCTCTTCCCTCTCGCCTGCCCATGAAGCCAGATTTGTGATT
GCATATCCAGCTTGCAGCAATGCTGCTGCACTGACGCGCAAGATGTGGTG
ATTCGGTCAGATTAATTTGAAGATCTGTCGCAACGTGAAAATGGTCGTGA
ATATGCCAAAGTCAATTTCTCGTGCTGCTGCTTCGTCAGGTGGTGCGAAT
GCCTCTCACAGGCCCTCCGCCGAGAGCGAAGAGAGGGACTCATTTTCCAA
GGCAGCCATTAGCGGCGGAGTCGAGGGTGCCCGCGAGAAGGTGGAGAAGG
GAACAGCACCAGGGGAGAAGGCGAAGGAGAAAGTGAGCTCTTTTCTTGCC
CTCCGCTGCCCCAGCCAGCGCATACTTCGAAACATACTACTATGAAACGG
GGCGCGGAAAGCTAAAGCGCGGTGCCTCGACTGCCTCTCGCAGCAGCGCA
CGTCACTGTTGGTAAAATTGAAGATACGGATGTCTTTCTAAGAGATGCCC
TGGCACTCAGCCATGCACTGACGCTGACCCTAGCTACACGCGCATCAGTA
GTGCACACAGGCAAAGCCGCACGGTGTACAGGATACAGATGCGAGTTCCC
GCTTCGGCTCGGAGCTGCATTCCTGACGCGCAAACGCAAACGCAATAAAT
GCAGCGCTAATTACGCAACACAGCCTTTGAGCCTGCACACAACAAAGCAT
ATCTGTTGGTCCGCAGGCTGAGTGCATAGGCATGCGTCGCTACATGGTGA
CTGCGGTTGCGCTGCAGCATCGCAAGTGGAGATGCTCTCAGAACTGTGTA
CACAACGTGAAAAAGGAATGTTCAGGAGAGAACGGCAGTGTGCTGTTCGT
GTTTGGGAAGGTGCTGATGTCAGGTGCCACAAGGGCCTGGGCCTGCATCT
CTGCAAACAATGCAACTTTTTATTCGTGCTAGCTTTGGGTGTGAAAAAGC
CCAGATGGTCAGTCCAGCTTGAAATCAGATGCTACATGACACTCATCAGA
AGCACACGTGTGAATATGTTCCGTTGTTCAGTACTCCCAAGCAACGACGA
CCAAGCTCTTACATTGTGCTCCTGAAACACTGTTTATAAATACTTTTGAA
TGAGTCCACTTGAATCTAAGGCATGTTGTGTCTGCTGCTGCATTGTCACT
CAGATGGAGGGACAACACAGCCATCCACACTGCGGAGATCGCCATGTACG
GCAGCAACAATGGTGTACAAGCTCTTGCCTCGTTTTCCTGAAACGCTTGC
GTCAATGAGTTCACTTGTAACCAGGGCATGTTGACTGCTGTTGCTTTGTC
GCTCAGATGGAGGACATGATCAACTCGGCCATCCACACTGTGGAGAAGGC
CATGCCAGGCAGCAACAAGGACCTGCCAGACAGGGACTTTACCCCGCCGC
CGCCCAAGAAGGGCAGCAGTTGAAGAAGTGGAGCGTTACACTTGAAGAAG
TGGAGCGCCACGCTTTACCATCAACAGGGCGCGAGCGATCTGACGTGGGG
TCTCAGGCGCGATGTTTGTGATATACTTAGTCCCCAGTACCTACCCTCCC
CAGCTTCCCGCGAGGTACTGAGGAGTGACTATATCGATCTGCGCAACCGT
AGTGACAGGGCTCGCGCGAGCGTGCTGCTGTAGAGCGGTGCTGCGTACGC
A

Coding sequence (CDS) from alignment at Contig_146:308143..315493+

>mRNA_16157 ID=mRNA_16157|Name=jgi.p|Trimin1|353155|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3120bp|location=Sequence derived from alignment at Contig_146:308143..315493+ (Tribonema minus UTEX_B_3156 )
ATGCAAGCGCTGCTCTCGGATGGCTTCCAGGTCCTCAGTAGTGTCACATT
TGGCGCCACGGGCGAGATCATCAGCGAGCGTGGCACCGCCCACCACGGCA
GCAGCAACGGCGCCGGCGGCGGCGGCGGCGCAGCGGCGGCGGCGGCAGCG
GCGGGCAAGGGCAGCCGACCCCCAAGCGGTTGCACTGCCGCCGCCCACCC
ACGCAGGGCATCTCATTCATCGCCGCCGCTGCCGCCTGACAACAGCTCAG
GACTGGTGATAGGCATGCGGCACAGCGCGTCGGTGCCGCACCTGCACCTG
CCGCCGACCGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAAGC
GGCGGCGGCGGCGGCAGGGGGCCGCGGTACAAGCCCCGCGCTGAATGGGC
TCGGCGGCGGCGGCGTGGAGCGCAGGGCAGCGGAGAGCGCAGATGTGGCG
GCGCAGATGCGGCGCTGCACGACGGCGCCCGGCGCGCTGCACCACGAGAC
GGACGCGCTGCCGCCGCAGCAGCACAAGCGACGCCGCTCAAGCGACGGCA
GCGACGCGGACGCCGCGGGCTCTCTCATTCTCATGGGCAATGGGGGTGGC
GCTGCCGCCGCCGCCGCGCGCGGCGGCATGGGCTGCGCCGGCGGCAGCAG
CGGCAGCCTCAGCAGCAGCGGCGGCATGATGGATGCGCCGTCGCCCCTGC
ACGGCGCGATGCCGCCGCCACAGTCGACCATGCCGTCCCCGGGTCTGTAC
CCGCAGCACGGCCCCGGGGGGAGCAGAGTTGCAGGCCAGCGGCCCATACG
CCCACGCATCAGCCTGCGCGTTGCGTCGGGGACGGCCGGCGGCGGCAGTG
GCGGAGCAGCAGCAGCAGCAGCGGCGGCGAATGCGGCGCCGAAGCTGCTG
CCCGCGCAGCAGCAGGCGCAGAAACCCGCGGTGACGGTGGCAGTGGGGGG
TGCGATGAACGGCGTGCAGCACTCGCAGTCGCAGCAGCTGCAGCCGCCGC
TCTTCAAGCGGCCCACGATCTCGCTCAGCGTGCGCAGGCACGGCGGCGGC
AGCAACGGCAGCACCCCTAGCAGTACCAGCAGCGGGCGGAGCTCCTCTAA
CGGCTTCGGGAACAGCGGCGGTGGCGGCGGCGCTGCGCAGTGCAGCGCGA
CCAGCTGGAGCCCGCCGCGCTCGCGTCCGTCGCCCGCTGGCAGCAGCAGC
GGCGGCGGCGCGGCGGCGGCGGTGCTGGCGGACGCGGCGCTCGTGGCGCG
GCTGGCGGCATTCCAGGACGGCGCGCCACGCGTCGCCATCGCGGCGAACG
CCGCGGCGCTGGCGGCGGCTGGCCACGCGTCGCTCGTGCGCGACCGCTGC
GCGCACGGCGAGCGCGTGGCGCCGAGCCGCGCGGCGCTGCCGCTGGCGGC
GCTCGGCGGCGGCGGCAGCGGCGGCGGCGGCGTGGCGCTGCTGGACGCGC
TGTACGACGCGGCGGGCGCGCGCGGCGGGAGCGGCGTGCTGACACTGCAG
GCGGCGGTGGCGCGCGGCGACGTCGCGGCGGCGCGCTGGGCACTAGAGCG
CTGCGACCGCGCGGCGGCGGCGGCGGCAGGCGTCGGGTGCGTGATCGCGG
CCGCGGCGCGCGGCGACGGCGCCATGCTGCAGTGGCTCGCATCATCCGGC
GTGAGCACGCCCGCGGTGCCCAGGGCGCTGGAGGAGGCTGCGAAGGGCGG
GCACGTCGCCGCGGTGCACTGGCTGGTCACGCAGCAGTCGGAGTCGGTGA
TGCGCAGCTCGGCGCACTGGCTGGTCACGCAGGGCTGCATCCCCGACGCC
GCCGCCATCAGCGCCGCCGCCGCCGCCGGCCACACAGCCGTTGTCCACAA
GCTGCTGCTGCTCGCGGGCCCCACAGCAGCGCTCTCCCTCGGCAGCGCGG
CGCTCGCGGCGGCGTGCGGCGCAGGGCAGCTGGAGCTCGCGCGCTGGCTG
TGGGGCGTCGGCGGCGCGGCGCTGGATGCTGCGTCAGCTCTCAATGCCGC
GCTCGGCCGCGGCCAGTGGGAGGCCGCGCGGTTCCTGCTGCTGCGCGCGG
GGGAGGCGCTGGCCGCTGCGCTCCGCCGCGGCCAGTGGGAGGCCGCGCGC
TTCCTGCTGCTACGCGCGAGGAGGCGCTGGCGTAGTGCAGTGGGGGCGGC
GGCGGCGGAGGCGCACAACGCGGTAGCAGCAGTGCTCAACGCCGTGTCAG
CGCTCAACGCCGCGCTCGACCGCGGCCAGCGGGAGGCCGCGCGCTTCCTG
TTGCTGCGCGGACGGGAGGCGCTGGCCAACGCGTGTGCTGCTGCGCGCGA
GGGAGGCGCTGGCGTAGGCGCGCGCACTCACGGTGCGGCGGCGGAGGTAG
CGGACGCGGCAGCAGCAGTGCGCGACGCTGCGGCGGAGCTCAGCGGCGGC
GTGCGCTGCCGGCGGCGGGGGCAAGGAGGAGCGATTCGAGGCGCTGCTGC
TGCGGTGCGGGGCAGCTACCGGGCTGCGCGTGTGTGCACGCTCGCAGCGG
CAGCGGTCGCGCGGCGCTGCGTGGGCACTGGTGGCGGGCATGCGCATGAC
CCGCACGTGAAGCAGCGGAGCGGCATCAGCAGCGCAGCGGCGGCAGCGGC
AGCGGCACCAGCGGCGGCGGCGCAGCTCGACGGCTGCGGCTTATACCTAC
CCGTATACGCCGCGCGCTCTGTCAAGCGGCAGCGCCCCGCAGCATCACCC
GCGCACGCGGGCAACAGGCAACGTTGCCCGCTGCGGCGGCTGGTCGTCGT
GCGGAACCTGGAATCCCTCTACAGCAAGTCCAAATACCCTCCCACAGACG
AGGATCCGAAGGGAAAAGGCCCGCCAGCTGCAGGAGAAGCTCTCCCGGCA
GCCGCTGAAGGTGGTGCGAATGCCTCTCACAGGCCCTCCGCCGAGAGCGA
AGAGAGGGACTCATTTTCCAAGGCAGCCATTAGCGGCGGAGTCGAGGGTG
CCCGCGAGAAGGTGGAGAAGGGAACAGCACCAGGGGAGAAGGCGAAGGAG
AAAATGGAGGACATGATCAACTCGGCCATCCACACTGTGGAGAAGGCCAT
GCCAGGCAGCAACAAGGACCTGCCAGACAGGGACTTTACCCCGCCGCCGC
CCAAGAAGGGCAGCAGTTGA