mRNA_16781 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|176998
Unique NamemRNA_16781
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A835Z8X8_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X8_9STRA)

HSP 1 Score: 329 bits (844), Expect = 2.820e-114
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1 
Query:    1 LPVRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTLLYKGSA 486
            LPVRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTLLYKGSA
Sbjct:    1 LPVRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTLLYKGSA 162
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BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A7R9U3H3_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3H3_9STRA)

HSP 1 Score: 253 bits (646), Expect = 1.720e-83
Identity = 122/154 (79.22%), Postives = 133/154 (86.36%), Query Frame = 1 
Query:    7 VRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 468
            +RIGHG+DIHR+A GKKLVIGGV I FE G EAHSDGDVIYHSVVDAILGAL +PDIGQLFPDNDP+WSG+DSSIFM+EAY+RM  RGY IGNVDVTLILQ+PKV+D KP M DNI  LLH  P RVNVKARTHE VDSVGESRA+ CHVV  L
Sbjct:   46 LRIGHGFDIHRMAPGKKLVIGGVTIDFELGVEAHSDGDVIYHSVVDAILGALTLPDIGQLFPDNDPEWSGADSSIFMKEAYKRMDARGYRIGNVDVTLILQKPKVKDFKPLMKDNIVELLHTTPDRVNVKARTHEKVDSVGESRALSCHVVTIL 199
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BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: D7FSD9_ECTSI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSD9_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 6.160e-83
Identity = 122/152 (80.26%), Postives = 133/152 (87.50%), Query Frame = 1 
Query:   13 IGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 468
            IGHG+DIHRL EGK+LVIGGV+IP+E GA+AHSDGDVIYHSVVDAILGAL +PDIGQLFPDNDP WSG+DSSIFMEEAYRRM  RG+ +GNVDVTLILQ+PKV DIKP M DNI RLL    GRVNVKARTHE VDSVGE RAM CHVV+ L
Sbjct:   13 IGHGFDIHRLVEGKELVIGGVNIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPDWSGADSSIFMEEAYRRMDERGFRVGNVDVTLILQKPKVMDIKPLMRDNIVRLLRTSLGRVNVKARTHEKVDSVGEGRAMACHVVVLL 164
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BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A7S2XZX5_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZX5_9STRA)

HSP 1 Score: 249 bits (636), Expect = 1.270e-81
Identity = 120/159 (75.47%), Postives = 135/159 (84.91%), Query Frame = 1 
Query:    1 LPVRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTLLYK 477
            +P  +GHG+DIHRLA G  LVIGGV IP+E GAEAHSDGDVIYHSVVDAILGAL +PDIGQLFPDNDP+W G+DSS+FMEEAYRRM   GY IGNVDVTLILQ+PKV+DIKPAM +NI RLL   P +VNVKARTHE VDSVGE R+M CHVV+ L+ K
Sbjct:   69 MPFLVGHGFDIHRLAPGLPLVIGGVTIPYELGAEAHSDGDVIYHSVVDAILGALTLPDIGQLFPDNDPRWKGADSSVFMEEAYRRMDEAGYTIGNVDVTLILQKPKVKDIKPAMKENIVRLLRTTPSQVNVKARTHEKVDSVGEGRSMACHVVVLLMKK 227
[Close]
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A7S2WW46_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW46_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.830e-77
Identity = 115/154 (74.68%), Postives = 126/154 (81.82%), Query Frame = 1 
Query:    7 VRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 468
            +RIGHGYDIHRLA G  LVIGGVDI +E G EAHSDGDV++HSVVDAI GAL +PDIGQ FPD DP+W G+ S +FMEEAY +M  RGY IGNVDVTLILQ+PKV DIKP M DNI RLL     RVNVKARTHE VDSVGE RA+ECHVVLTL
Sbjct:   63 LRIGHGYDIHRLAPGLPLVIGGVDIDYELGTEAHSDGDVVFHSVVDAIFGALGLPDIGQFFPDTDPRWKGASSDVFMEEAYNQMVARGYHIGNVDVTLILQKPKVMDIKPKMKDNIVRLLRTSESRVNVKARTHEKVDSVGECRALECHVVLTL 216
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BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A0G4H9P7_9ALVE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H9P7_9ALVE)

HSP 1 Score: 233 bits (595), Expect = 1.970e-75
Identity = 109/153 (71.24%), Postives = 125/153 (81.70%), Query Frame = 1 
Query:   10 RIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 468
            R+GHGYDIHRLA G  L IGG+DIP+EKG EAHSDGDV++HS+ DAI GAL +PDIGQ FPD DP+W G+ S +FMEEA+R+M  RGY IGN DVTLIL+RPKV+D KP M D I  LL AP  RVNVKARTHE VDSVGESRA+ECHVV+ L
Sbjct:   68 RVGHGYDIHRLAPGLTLTIGGIDIPYEKGTEAHSDGDVVFHSLCDAIFGALSLPDIGQQFPDTDPRWKGAASCVFMEEAFRQMDERGYRIGNADVTLILERPKVKDFKPKMVDRICELLRAPHSRVNVKARTHEKVDSVGESRALECHVVVVL 220
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BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A7S0SRS3_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRS3_9STRA)

HSP 1 Score: 231 bits (590), Expect = 5.890e-75
Identity = 108/154 (70.13%), Postives = 127/154 (82.47%), Query Frame = 1 
Query:    7 VRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 468
            +RIGHG+DIHRL EG KLVIGGV IP+  GA+AHSDGD +YH VVDAILGAL +PDIGQ+FPDNDP+W G+DSSIFM EAY RM  RGY I N+DVTLILQ PKV+DIKP+M +NI +LLH    RVN+KARTHE VDS+GES++  CH V+ L
Sbjct:   47 IRIGHGFDIHRLIEGTKLVIGGVTIPYHLGADAHSDGDALYHCVVDAILGALNLPDIGQIFPDNDPKWKGADSSIFMIEAYNRMIERGYRISNLDVTLILQSPKVKDIKPSMKENIVKLLHTADNRVNIKARTHEKVDSIGESKSYACHAVVLL 200
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BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A0G4FLM8_VITBC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLM8_VITBC)

HSP 1 Score: 227 bits (578), Expect = 8.890e-73
Identity = 105/160 (65.62%), Postives = 129/160 (80.62%), Query Frame = 1 
Query:    7 VRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTLLYKGSA 486
            +RIGHGYDIHRLA G +L +GGV I +EKG EAHSDGDVI+HS+ DA+ GAL +PDIGQ FPD DP+W  + S +FME+A+R+M  RGY +GNVDVTLIL+RPKV+D+K  M DNI RL+  PP +VN+KARTHE VDSVGE+RA+ECHVV+ L  K  A
Sbjct:   60 MRIGHGYDIHRLAPGLQLTVGGVKIDYEKGTEAHSDGDVIFHSLCDAVFGALALPDIGQQFPDTDPKWKDASSDLFMEDAWRQMEERGYRLGNVDVTLILERPKVKDLKAGMKDNICRLMRVPPSQVNIKARTHEKVDSVGENRAIECHVVVLLERKMDA 219
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BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A7S0GXU7_9EUKA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GXU7_9EUKA)

HSP 1 Score: 225 bits (573), Expect = 3.700e-72
Identity = 109/154 (70.78%), Postives = 125/154 (81.17%), Query Frame = 1 
Query:    7 VRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 468
            +RIGHG+DIHRL +G  L IGGV IPFEKG  AHSDGDV+YHS+ DAILGA+ MPDIGQLFPDNDPQW G+ S  FM EAYR M  RGY+IGNVDVTLILQ+PKV+DIKP M +NI +LL+    RVN+KARTHE VDSVGE RA+ CH V+ L
Sbjct:   63 MRIGHGWDIHRLEDGLTLTIGGVVIPFEKGTVAHSDGDVLYHSLTDAILGAIGMPDIGQLFPDNDPQWKGAASHQFMTEAYRLMKERGYQIGNVDVTLILQKPKVKDIKPEMKENIVKLLNTDASRVNIKARTHENVDSVGEVRALACHSVVLL 216
[Close]
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A6V3M8V7_9EUKA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3M8V7_9EUKA)

HSP 1 Score: 226 bits (575), Expect = 7.260e-72
Identity = 108/157 (68.79%), Postives = 127/157 (80.89%), Query Frame = 1 
Query:    4 PVRIGHGYDIHRLAE--GKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 468
            P+RIGHG+DIHRL E  G  L IGGV IPFEKG  AHSDGDV+YHS+ DAILGA+ MPDIGQLFPD DP+W G+ S +F+ E++R M  RGY IGNVD+TLILQ+PKV+DIKP MA+NI +LLH  P RVN+KARTHE VDSVGE RA+ CH V+ L
Sbjct:  103 PLRIGHGWDIHRLEEDSGAPLTIGGVVIPFEKGIVAHSDGDVLYHSLTDAILGAIGMPDIGQLFPDTDPRWKGAASHVFLTESHRLMTERGYRIGNVDITLILQKPKVKDIKPEMAENIVKLLHTHPSRVNIKARTHEKVDSVGEVRALACHAVVLL 259
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8X8_9STRA2.820e-114100.002-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7R9U3H3_9STRA1.720e-8379.222-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
D7FSD9_ECTSI6.160e-8380.262-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S2XZX5_9STRA1.270e-8175.472-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S2WW46_9STRA1.830e-7774.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A0G4H9P7_9ALVE1.970e-7571.242-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S0SRS3_9STRA5.890e-7570.132-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A0G4FLM8_VITBC8.890e-7365.632-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S0GXU7_9EUKA3.700e-7270.782-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A6V3M8V7_9EUKA7.260e-7268.792-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_144contigContig_144:45855..48137 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|176998|e_gw1.144.10.1
BiGG ReactioniRC1080.CRv4_Au5_s12_g3144_t1
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC00002,RC01440
KEGG ReactionR05637
KEGG ModuleM00096
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG koko:K01770
EC4.6.1.12
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0006721,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0015994,GO:0015995,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Preferred nameMCS
Description2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
COG categoryI
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0245@1|root,2QS77@2759|Eukaryota
Evalue1.01e-83
Seed ortholog2880.D7FSD9
Hectar predicted targeting categoryother localisation
Ec32 ortholog description2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Ec32 orthologEc-25_000990.1
TranscriptId177320
TrackFilteredModels1
ProteinId176998
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176998gene_16781Tribonema minus UTEX_B_3156 geneContig_144 45855..48137 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176998Trimin1|176998|e_gw1.144.10.1Tribonema minus UTEX_B_3156 polypeptideContig_144 45855..48137 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16781_2exon_16781_2Tribonema minus UTEX_B_3156 exonContig_144 45855..46100 -
exon_16781_1exon_16781_1Tribonema minus UTEX_B_3156 exonContig_144 47895..48137 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16781CDS_16781Tribonema minus UTEX_B_3156 CDSContig_144 47895..48137 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16781 ID=mRNA_16781|Name=jgi.p|Trimin1|176998|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=489bp|location=Sequence derived from alignment at Contig_144:45855..48137- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTGCCGGTGCGCATCGGCCACGGCTACGACATTCACCGCCTCGCCGAGGG
CAAGAAGCTCGTAATAGGCGGCGTGGACATCCCCTTTGAGAAGGGGGCGG
AGGCGCACAGCGACGGCGACGTCATCTACCACAGCGTCGTCGACGCGATA
CTGGGCGCGCTGTGCATGCCCGACATCGGACAGCTGTTCCCCGATAACGA
CCCGCAGTGGAGCGGCTCTGACAGCAGCATTTTTATGGAGGAGGCCTACA
GACGCATGGCGGGGCGCGGCTACGAAATCGGCAACGTCGACGTCACCCTT
ATCCTGCAGCGCCCGAAAGTGCGCGACATAAAGCCGGCGATGGCCGATAA
CATCGCACGCCTGCTACATGCGCCGCCGGGGCGCGTCAACGTCAAAGCGC
GCACGCACGAACTCGTGGACTCGGTAGGCGAGAGCCGCGCGATGGAGTGC
CACGTCGTGTTGACGCTCCTTTACAAGGGGTCGGCGTAG
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protein sequence of jgi.p|Trimin1|176998

>Trimin1|176998|e_gw1.144.10.1 ID=Trimin1|176998|e_gw1.144.10.1|Name=jgi.p|Trimin1|176998|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=163bp
LPVRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAI
LGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTL
ILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMEC
HVVLTLLYKGSA*
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mRNA from alignment at Contig_144:45855..48137-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16781 ID=mRNA_16781|Name=jgi.p|Trimin1|176998|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2283bp|location=Sequence derived from alignment at Contig_144:45855..48137- (Tribonema minus UTEX_B_3156 )
CTGCCGGTGCGCATCGGCCACGGCTACGACATTCACCGCCTCGCCGAGGG
CAAGAAGCTCGTAATAGGCGGCGTGGACATCCCCTTTGAGAAGGGGGCGG
AGGCGCACAGCGACGGCGACGTCATCTACCACAGCGTCGTCGACGCGATA
CTGGGCGCGCTGTGCATGCCCGACATCGGACAGCTGTTCCCCGATAACGA
CCCGCAGTGGAGCGGCTCTGACAGCAGCATTTTTATGGAGGAGGTGAGCA
GCAGCGTGACATGCGATGGGCAAACAAGCTGCCTCCGTCACTGACCGCTG
CCTCGCGGCCGCTGAGAACTGCCTCAGCCACTGAGTACTGGCACGCCTGC
TGCTGAGCTCTGCTGCATGTGCTGAGTGGAGCACTGCTGCATGTGCTGTG
CTCTGGGGTTTGGGTGAATGTTGCGGTGCTGGTGCTGAGCACTGCTTCAT
CTGCTAAGCCTGCATTTGCAGCAGTGCTCACTGCTCACCAGATGCAGCAG
TGCTCAAAGCAGATGAGGCAGGGTACTCGGTGGCTGTGGTTGTTCTCAGC
AGCTGCAGCAGTAGACCGAACGGGCCTGTAGTGTGGGGTTGGTTGTAGTG
AGCACGCAAGGCTGACGAGACCTGCAGGCGCTCACATTCTTAGCATATTT
TGTCAATAATTTTGTACAGTGCTTCGTGTACCATGGCCTGAGGCCTGCAG
GCACTCATATTTATCAATTCTCCCTAATCATCCATGAACTCATTCATGTA
GAGACCTTCAGGCGCATGGCGGGGCGCGGCTACAGAATCGGCAACGTGGA
CATCACCCATCACATTCAAGAGTTCACTTTCGCATTCATCTCATCCGTCT
GCAATGGCGTTCATGTAATGACCTAGGCCGGCAGGCGCTCACATTCATCA
GTTGATCAATTCGTCCATGCATTCATGCATGCATTCATTCACGTTGAGGC
CTACAGGCGCATGGCAGGGCGCGGCTGCGAGATTGGCAATGCGGACGTCA
CCCTAACATATTCTTGTGTTCATTAATTTGTTAATTAATCCTGAGACATG
ACCCTCATGTACCAACCTGAGGCCTGCAGGCGCTCACATCCATCGATTGA
TCAATTCGTTCATTCAATCATTCATTCCTGCACTCATTCAGGCCTACCGG
CGCATGGCGAAGCGCAGCTACGAGTTTGGTAACGTGGACTTTACCCTCTC
ACATTCATCAGTTCACTTTCGCATTCATTGCATTTGTCGTCCATGACTTT
CATGTATCGACCTGCGGCCGGCAGGCGGTACATTATATTGGCAACGTGGA
CGTCACCCTCTCACATTCATCAGTTCACTCTTCCATTACTCCGGAATGAC
CTTCATGTACCAACCTGAGGCCTGCAGGCGCTCACATATTATGCATATTT
TGTCAATAACTTCGTGCAGTCATTTCATATATCACGACCTAAGGCCTGCA
GGCGCTCACGTTCATCAAATTCCCCAAATCATCCATGAATTCATTCATGT
GCCAGGCCTACAGGCGCATGGCGGGGCGCGGCTACGAGTTCGTTAATGTG
GACGTCACTTTTGCTCTCACATTCATCAGATCACTCTTCCATTACTCCTG
AATGACCTTCATGTTCCAACCTGAGGCCTGCAGGCGCTCACATATTATGC
ATATTTTGTCAATAATCTTGTGCAGTCATTTCATATATCACGACCTAAGG
CCTGCAGGTGCTCACGTTCATCAATTTCCCCAAATCATCCATGAATTCAT
TCATGTGCCAGGCCTACAGGCGCACGGCGGGGCGCGGCTACGAGTTCGTC
AATGTGGACGTCACCCTTGCTCTCACGTTCATCAGTTCACTCTCGCATTC
GTCTTCCATGACTTTCATGTACCTATGTGAGGCCTGCGGGCGCTCACTTT
TATCAGTTGGTCACGGGCGCTCACATTTATCTGATGATCCATTCATCCAT
CAATTTGTTCATTCATTAATTCGCTCATTCATTCGTTCATGCACTCATTC
CCTTGTTCATGCGTTCTTTATTTCATCGATGTACCAGGCCTACAGACGCA
TGGCGGGGCGCGGCTACGAAATCGGCAACGTCGACGTCACCCTTATCCTG
CAGCGCCCGAAAGTGCGCGACATAAAGCCGGCGATGGCCGATAACATCGC
ACGCCTGCTACATGCGCCGCCGGGGCGCGTCAACGTCAAAGCGCGCACGC
ACGAACTCGTGGACTCGGTAGGCGAGAGCCGCGCGATGGAGTGCCACGTC
GTGTTGACGCTCCTTTACAAGGGGTCGGCGTAG
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Coding sequence (CDS) from alignment at Contig_144:45855..48137-

>mRNA_16781 ID=mRNA_16781|Name=jgi.p|Trimin1|176998|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=489bp|location=Sequence derived from alignment at Contig_144:45855..48137- (Tribonema minus UTEX_B_3156 )
CTGCCGGTGCGCATCGGCCACGGCTACGACATTCACCGCCTCGCCGAGGG
CAAGAAGCTCGTAATAGGCGGCGTGGACATCCCCTTTGAGAAGGGGGCGG
AGGCGCACAGCGACGGCGACGTCATCTACCACAGCGTCGTCGACGCGATA
CTGGGCGCGCTGTGCATGCCCGACATCGGACAGCTGTTCCCCGATAACGA
CCCGCAGTGGAGCGGCTCTGACAGCAGCATTTTTATGGAGGAGGCCTACA
GACGCATGGCGGGGCGCGGCTACGAAATCGGCAACGTCGACGTCACCCTT
ATCCTGCAGCGCCCGAAAGTGCGCGACATAAAGCCGGCGATGGCCGATAA
CATCGCACGCCTGCTACATGCGCCGCCGGGGCGCGTCAACGTCAAAGCGC
GCACGCACGAACTCGTGGACTCGGTAGGCGAGAGCCGCGCGATGGAGTGC
CACGTCGTGTTGACGCTCCTTTACAAGGGGTCGGCGTAG
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