Trimin1|176998|e_gw1.144.10.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|176998
Unique NameTrimin1|176998|e_gw1.144.10.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length163
Homology
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A835Z8X8_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X8_9STRA)

HSP 1 Score: 329 bits (844), Expect = 2.820e-114
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query:    1 LPVRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTLLYKGSA 162
            LPVRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTLLYKGSA
Sbjct:    1 LPVRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTLLYKGSA 162          
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A7R9U3H3_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3H3_9STRA)

HSP 1 Score: 253 bits (646), Expect = 1.720e-83
Identity = 122/154 (79.22%), Postives = 133/154 (86.36%), Query Frame = 0
Query:    3 VRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 156
            +RIGHG+DIHR+A GKKLVIGGV I FE G EAHSDGDVIYHSVVDAILGAL +PDIGQLFPDNDP+WSG+DSSIFM+EAY+RM  RGY IGNVDVTLILQ+PKV+D KP M DNI  LLH  P RVNVKARTHE VDSVGESRA+ CHVV  L
Sbjct:   46 LRIGHGFDIHRMAPGKKLVIGGVTIDFELGVEAHSDGDVIYHSVVDAILGALTLPDIGQLFPDNDPEWSGADSSIFMKEAYKRMDARGYRIGNVDVTLILQKPKVKDFKPLMKDNIVELLHTTPDRVNVKARTHEKVDSVGESRALSCHVVTIL 199          
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: D7FSD9_ECTSI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSD9_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 6.160e-83
Identity = 122/152 (80.26%), Postives = 133/152 (87.50%), Query Frame = 0
Query:    5 IGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 156
            IGHG+DIHRL EGK+LVIGGV+IP+E GA+AHSDGDVIYHSVVDAILGAL +PDIGQLFPDNDP WSG+DSSIFMEEAYRRM  RG+ +GNVDVTLILQ+PKV DIKP M DNI RLL    GRVNVKARTHE VDSVGE RAM CHVV+ L
Sbjct:   13 IGHGFDIHRLVEGKELVIGGVNIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPDWSGADSSIFMEEAYRRMDERGFRVGNVDVTLILQKPKVMDIKPLMRDNIVRLLRTSLGRVNVKARTHEKVDSVGEGRAMACHVVVLL 164          
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A7S2XZX5_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZX5_9STRA)

HSP 1 Score: 249 bits (636), Expect = 1.270e-81
Identity = 120/159 (75.47%), Postives = 135/159 (84.91%), Query Frame = 0
Query:    1 LPVRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTLLYK 159
            +P  +GHG+DIHRLA G  LVIGGV IP+E GAEAHSDGDVIYHSVVDAILGAL +PDIGQLFPDNDP+W G+DSS+FMEEAYRRM   GY IGNVDVTLILQ+PKV+DIKPAM +NI RLL   P +VNVKARTHE VDSVGE R+M CHVV+ L+ K
Sbjct:   69 MPFLVGHGFDIHRLAPGLPLVIGGVTIPYELGAEAHSDGDVIYHSVVDAILGALTLPDIGQLFPDNDPRWKGADSSVFMEEAYRRMDEAGYTIGNVDVTLILQKPKVKDIKPAMKENIVRLLRTTPSQVNVKARTHEKVDSVGEGRSMACHVVVLLMKK 227          
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A7S2WW46_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW46_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.830e-77
Identity = 115/154 (74.68%), Postives = 126/154 (81.82%), Query Frame = 0
Query:    3 VRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 156
            +RIGHGYDIHRLA G  LVIGGVDI +E G EAHSDGDV++HSVVDAI GAL +PDIGQ FPD DP+W G+ S +FMEEAY +M  RGY IGNVDVTLILQ+PKV DIKP M DNI RLL     RVNVKARTHE VDSVGE RA+ECHVVLTL
Sbjct:   63 LRIGHGYDIHRLAPGLPLVIGGVDIDYELGTEAHSDGDVVFHSVVDAIFGALGLPDIGQFFPDTDPRWKGASSDVFMEEAYNQMVARGYHIGNVDVTLILQKPKVMDIKPKMKDNIVRLLRTSESRVNVKARTHEKVDSVGECRALECHVVLTL 216          
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A0G4H9P7_9ALVE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H9P7_9ALVE)

HSP 1 Score: 233 bits (595), Expect = 1.970e-75
Identity = 109/153 (71.24%), Postives = 125/153 (81.70%), Query Frame = 0
Query:    4 RIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 156
            R+GHGYDIHRLA G  L IGG+DIP+EKG EAHSDGDV++HS+ DAI GAL +PDIGQ FPD DP+W G+ S +FMEEA+R+M  RGY IGN DVTLIL+RPKV+D KP M D I  LL AP  RVNVKARTHE VDSVGESRA+ECHVV+ L
Sbjct:   68 RVGHGYDIHRLAPGLTLTIGGIDIPYEKGTEAHSDGDVVFHSLCDAIFGALSLPDIGQQFPDTDPRWKGAASCVFMEEAFRQMDERGYRIGNADVTLILERPKVKDFKPKMVDRICELLRAPHSRVNVKARTHEKVDSVGESRALECHVVVVL 220          
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A7S0SRS3_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRS3_9STRA)

HSP 1 Score: 231 bits (590), Expect = 5.890e-75
Identity = 108/154 (70.13%), Postives = 127/154 (82.47%), Query Frame = 0
Query:    3 VRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 156
            +RIGHG+DIHRL EG KLVIGGV IP+  GA+AHSDGD +YH VVDAILGAL +PDIGQ+FPDNDP+W G+DSSIFM EAY RM  RGY I N+DVTLILQ PKV+DIKP+M +NI +LLH    RVN+KARTHE VDS+GES++  CH V+ L
Sbjct:   47 IRIGHGFDIHRLIEGTKLVIGGVTIPYHLGADAHSDGDALYHCVVDAILGALNLPDIGQIFPDNDPKWKGADSSIFMIEAYNRMIERGYRISNLDVTLILQSPKVKDIKPSMKENIVKLLHTADNRVNIKARTHEKVDSIGESKSYACHAVVLL 200          
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A0G4FLM8_VITBC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLM8_VITBC)

HSP 1 Score: 227 bits (578), Expect = 8.890e-73
Identity = 105/160 (65.62%), Postives = 129/160 (80.62%), Query Frame = 0
Query:    3 VRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTLLYKGSA 162
            +RIGHGYDIHRLA G +L +GGV I +EKG EAHSDGDVI+HS+ DA+ GAL +PDIGQ FPD DP+W  + S +FME+A+R+M  RGY +GNVDVTLIL+RPKV+D+K  M DNI RL+  PP +VN+KARTHE VDSVGE+RA+ECHVV+ L  K  A
Sbjct:   60 MRIGHGYDIHRLAPGLQLTVGGVKIDYEKGTEAHSDGDVIFHSLCDAVFGALALPDIGQQFPDTDPKWKDASSDLFMEDAWRQMEERGYRLGNVDVTLILERPKVKDLKAGMKDNICRLMRVPPSQVNIKARTHEKVDSVGENRAIECHVVVLLERKMDA 219          
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A7S0GXU7_9EUKA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GXU7_9EUKA)

HSP 1 Score: 225 bits (573), Expect = 3.700e-72
Identity = 109/154 (70.78%), Postives = 125/154 (81.17%), Query Frame = 0
Query:    3 VRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 156
            +RIGHG+DIHRL +G  L IGGV IPFEKG  AHSDGDV+YHS+ DAILGA+ MPDIGQLFPDNDPQW G+ S  FM EAYR M  RGY+IGNVDVTLILQ+PKV+DIKP M +NI +LL+    RVN+KARTHE VDSVGE RA+ CH V+ L
Sbjct:   63 MRIGHGWDIHRLEDGLTLTIGGVVIPFEKGTVAHSDGDVLYHSLTDAILGAIGMPDIGQLFPDNDPQWKGAASHQFMTEAYRLMKERGYQIGNVDVTLILQKPKVKDIKPEMKENIVKLLNTDASRVNIKARTHENVDSVGEVRALACHSVVLL 216          
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Match: A0A6V3M8V7_9EUKA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3M8V7_9EUKA)

HSP 1 Score: 226 bits (575), Expect = 7.260e-72
Identity = 108/157 (68.79%), Postives = 127/157 (80.89%), Query Frame = 0
Query:    2 PVRIGHGYDIHRLAE--GKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 156
            P+RIGHG+DIHRL E  G  L IGGV IPFEKG  AHSDGDV+YHS+ DAILGA+ MPDIGQLFPD DP+W G+ S +F+ E++R M  RGY IGNVD+TLILQ+PKV+DIKP MA+NI +LLH  P RVN+KARTHE VDSVGE RA+ CH V+ L
Sbjct:  103 PLRIGHGWDIHRLEEDSGAPLTIGGVVIPFEKGIVAHSDGDVLYHSLTDAILGAIGMPDIGQLFPDTDPRWKGAASHVFLTESHRLMTERGYRIGNVDITLILQKPKVKDIKPEMAENIVKLLHTHPSRVNIKARTHEKVDSVGEVRALACHAVVLL 259          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176998 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8X8_9STRA2.820e-114100.002-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7R9U3H3_9STRA1.720e-8379.222-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
D7FSD9_ECTSI6.160e-8380.262-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S2XZX5_9STRA1.270e-8175.472-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S2WW46_9STRA1.830e-7774.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A0G4H9P7_9ALVE1.970e-7571.242-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S0SRS3_9STRA5.890e-7570.132-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A0G4FLM8_VITBC8.890e-7365.632-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S0GXU7_9EUKA3.700e-7270.782-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A6V3M8V7_9EUKA7.260e-7268.792-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasePFAMPF02542YgbBcoord: 3..156
e-value: 3.7E-57
score: 193.0
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseTIGRFAMTIGR00151TIGR00151coord: 4..156
e-value: 7.5E-55
score: 183.2
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasePANTHERPTHR431812-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTICcoord: 1..159
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseHAMAPMF_00107IspFcoord: 3..158
score: 30.579861
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseCDDcd00554MECDP_synthasecoord: 4..156
e-value: 1.66581E-77
score: 225.402
IPR0365712-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamilyGENE3D3.30.1330.50coord: 2..162
e-value: 8.2E-65
score: 219.8
IPR0365712-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamilySUPERFAMILY69765IpsF-likecoord: 2..158
IPR0205552-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved sitePROSITEPS01350ISPFcoord: 37..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_144contigContig_144:45855..48137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176998mRNA_16781Tribonema minus UTEX_B_3156 mRNAContig_144 45855..48137 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|176998|e_gw1.144.10.1 ID=Trimin1|176998|e_gw1.144.10.1|Name=jgi.p|Trimin1|176998|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=163bp
LPVRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAI
LGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTL
ILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMEC
HVVLTLLYKGSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003526MECDP_synthase
IPR036571MECDP_synthase_sf
IPR020555MECDP_synthase_CS