mRNA_14307 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|176874
Unique NamemRNA_14307
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|176874 vs. uniprot
Match: A0A836CL44_9STRA (Heat shock protein Hsp33 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL44_9STRA)

HSP 1 Score: 620 bits (1598), Expect = 4.690e-224
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 1
Query:    1 MRSHRVVRRPQLLPVQSSLNIEPSPMTNRDDHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGNGMVDLGAPYDVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAKGEDPAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLYRCALLHPAPPL 951
            MRSHRVVRRPQLLPVQSSLNIEPSPMTNRDDHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGNGMVDLGAPYDVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAKGEDPAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLYRCALLHPAPPL
Sbjct:    1 MRSHRVVRRPQLLPVQSSLNIEPSPMTNRDDHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGNGMVDLGAPYDVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAKGEDPAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLYRCALLHPAPPL 317          
BLAST of jgi.p|Trimin1|176874 vs. uniprot
Match: D8LMK8_ECTSI (Heat shock protein 33 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK8_ECTSI)

HSP 1 Score: 346 bits (888), Expect = 1.620e-114
Identity = 170/288 (59.03%), Postives = 226/288 (78.47%), Query Frame = 1
Query:   70 SPMTNRDDHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGNGMVDL----GAPYDVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAKGEDPAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLYR 921
            +P+ N  DH++SA++GNG+V+ + +TAR+L+QDA+++QDL PLAADALGRVMVCT+L A GLKDRET Q +F+G GPL G++AI+DG GGVRGYV NG V+L        DV+ GIG+G+LKVVRNHPDY+RPY+GI  L+  +VAYD A YL +S+Q  S AI AG  V  ALVRQAGGY++ETLP ASEET K   +N+A+L+A+  DP+ L+  GMTP +I E+LLEG+GG+ ++T  +PE+ CHCS ERV+ AL+LL   EV++++ +EE IEVKCEFCG+LYR
Sbjct:  117 APVGNDADHMVSAVAGNGQVVARAVTARNLLQDALIRQDLYPLAADALGRVMVCTMLMAGGLKDRETFQLSFSGSGPLGGVVAISDGEGGVRGYVTNGKVELPLKDNGNQDVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQK-SCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKTEVEELVKKEETIEVKCEFCGKLYR 403          
BLAST of jgi.p|Trimin1|176874 vs. uniprot
Match: A0A6H5KBS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS9_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 2.280e-111
Identity = 170/288 (59.03%), Postives = 226/288 (78.47%), Query Frame = 1
Query:   70 SPMTNRDDHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGNGMVDL----GAPYDVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAKGEDPAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLYR 921
            +P+ N  DH++SA++GNG+V+ + +TAR+L+QDA+++QDL PLAADALGRVMVCT+L A GLKDRET Q TF+G GPL G++AI+DG GGVRGYV NG V+L        DV+ GIG+G+LKVVRNHPDY+RPY+GI  L+  +VAYD A YL +S+Q  S AI AG  V  ALVRQAGGY++ETLP ASEET K   +N+A+L+A+  DP+ L+  GMTP +I E+LLEG+GG+ ++T  +PE+ CHCS ERV+ AL+LL   EV++++ ++E IEVKCEFCG+LYR
Sbjct:  405 APVANNADHMVSAVAGNGQVVARAVTARNLLQDALIRQDLYPLAADALGRVMVCTMLMAGGLKDRETFQLTFSGSGPLGGVVAISDGEGGVRGYVTNGKVELPLKDNGNQDVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQK-SCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKAVINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKTEVEELVKKDEAIEVKCEFCGKLYR 691          
BLAST of jgi.p|Trimin1|176874 vs. uniprot
Match: A0A448ZMK1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZMK1_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.640e-71
Identity = 124/284 (43.66%), Postives = 183/284 (64.44%), Query Frame = 1
Query:   79 TNRDDHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGNGMVDLGAPYDVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAK---GEDPAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLYR 921
            +NRDD + SA+S +G V V   TAR+LV D ++   L  + ADA+GR  VC L+ ++G++  +T Q T   DGPL G++AI+DG G V+ YVG+ MV      ++   +GKG+++VV+NHPD+  PY+GI  +R+  +  D+  YL +S+Q  S A+ AG+ V G L   AGGYL+E LP A+ ET+ +   N+ +L+ K    + P  LL  G+TP  IAE +L+G+G +    I+ PE++C CSS+R+ RALRL+   EV +I+  EE IE +CEFCG  YR
Sbjct:   96 SNRDDQVFSAISEDGSVKVTACTARNLVNDLMIMHTLTAVPADAIGRTAVCALMMSNGMQAEQTCQITLNADGPLRGVVAISDGVGHVKAYVGSPMV---GDIELPEAVGKGMVQVVKNHPDWNNPYNGITAIRHGDIDRDIGAYLAESEQR-SCALAAGISVNGILCTAAGGYLIEQLPNATPETLSRVEKNLGKLVEKDGGNKLPTGLLLKGVTPLEIAETILDGLGMVPLQQIS-PEFECKCSSDRLIRALRLIPRSEVDEILESEEKIEARCEFCGTTYR 374          
BLAST of jgi.p|Trimin1|176874 vs. uniprot
Match: B5Y5I8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5I8_PHATC)

HSP 1 Score: 232 bits (592), Expect = 1.190e-70
Identity = 124/284 (43.66%), Postives = 184/284 (64.79%), Query Frame = 1
Query:   82 NRDDHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGN-GMVDLGAPYDVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAKG---EDPAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLYR 921
            NRDD + SA+SG+G + V   T R+L+ D  ++  +     DA+GR + C LL A+G++D + +Q T  GDGP+ GI+AIA GTG VRGYVG+ G+ ++     ++  +GKG +++V+NHPD+ RPY+GI  +R+  +  D+  YL +S+Q  S A+ A   + G L   AGGYL+E LPG   ETI +   N+A+L+ K    E PA LL  G+TP  +A  +L+G+  +  L   KP   CHC+ +R+FR+LRLL  EEV DI+ +EE IE +C+FCG++YR
Sbjct:   63 NRDDQVFSAMSGDGGIKVTAATVRNLLNDISLQHTMTATPTDAMGRTVTCGLLLANGIQDEQIVQITMNGDGPIRGIVAIASGTGQVRGYVGSPGLGEM----SLTDAVGKGSVQIVKNHPDWPRPYNGITAIRHGDIDRDIGIYLAESEQR-SCALAAATAMNGILCTAAGGYLIEQLPGVEPETIARVEQNLAKLVQKDGGDELPANLLLSGVTPLDMAAIILDGLD-MQPLQQIKPGLVCHCTEDRLFRSLRLLSKEEVDDILEKEEQIEARCQFCGKVYR 340          
BLAST of jgi.p|Trimin1|176874 vs. uniprot
Match: A0A1E7EWZ2_9STRA (Hsp33 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWZ2_9STRA)

HSP 1 Score: 231 bits (588), Expect = 7.440e-70
Identity = 119/283 (42.05%), Postives = 187/283 (66.08%), Query Frame = 1
Query:   79 TNRDDHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGNGMVDLGAPYDVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAK-GED--PAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLY 918
            +NR+D + SALS +G V +   TAR++V D ++   +  + ADA+GR +VC L+ ++G+++ +T Q TF  DGPL G++AI+DG G VRGYVG+ M+      ++   +G+G+++VV+NHPD+  PY+GI  +R+  +  D+  YL +S+Q  S A+ A   + G L   AGGYL+E LP A+ ET+ +   N+A L+ K G D  PA LL +G+TP  IAE +L+G+G +    I+ P+++C CSS+R+ RALRL+  +EV +I+  E  IE +C+FC + Y
Sbjct:   72 SNRNDQVFSALSEDGSVKITACTARNIVNDLMIMHTMTAVPADAIGRTVVCALMMSNGMQEEQTCQITFNADGPLRGVVAISDGVGNVRGYVGSPML---GDIELPEALGQGMVQVVKNHPDWSNPYNGITSIRHGDIDRDIGAYLAESEQR-SCALAAATSINGILCTAAGGYLIEQLPNATPETLARVEKNLATLVEKDGSDKLPANLLLNGVTPLEIAETILDGLGMVPLQQIS-PKFQCSCSSDRLIRALRLIPRKEVDEILEEEGKIEARCDFCSKTY 349          
BLAST of jgi.p|Trimin1|176874 vs. uniprot
Match: A0A1Z5JWD9_FISSO (Molecular chaperone Hsp33 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWD9_FISSO)

HSP 1 Score: 230 bits (586), Expect = 9.970e-70
Identity = 122/283 (43.11%), Postives = 180/283 (63.60%), Query Frame = 1
Query:   82 NRDDHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGNGMVDLGAPYDVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLM---AKGEDPAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLYR 921
            N  D + SA+SG+G + V   T R+++ DA ++  +  +  DALGR M C LL A+G+++ +T+Q T  GDGPL G++AIA G+G VRGYVG+ M+       +   +GKG ++VV+NHPD+ RPY+GI  +R+  +  DV  YL +S+Q  S A+ A V V G L   AGGYL+E LPG   + +KQ   N+A+L+     G  P  LL  G TP  IA  +L+G+  +  L   +P   C C+ +R+ R+LRLL  EEV+DI+A+E+ IE +C+FCG++YR
Sbjct:   69 NNRDQIFSAISGDGGIKVTVATIRNVINDASMQHTMTAVPTDALGRAMTCGLLMANGMQEEQTVQITMKGDGPLRGVVAIATGSGTVRGYVGSPML---GEMSLPEAVGKGSVQVVKNHPDWPRPYNGITAIRHGDIDRDVGIYLAESEQR-SCALAAAVSVKGILCTSAGGYLIEQLPGVEPDVVKQVEKNLAQLVEMDGTGNLPTGLLLQGQTPVDIAATILDGLD-MKPLQQMEPVLVCQCTEDRLMRSLRLLPREEVEDILAKEQQIEARCQFCGKVYR 346          
BLAST of jgi.p|Trimin1|176874 vs. uniprot
Match: A0A6V2EEP6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EEP6_9STRA)

HSP 1 Score: 230 bits (586), Expect = 2.510e-69
Identity = 125/283 (44.17%), Postives = 180/283 (63.60%), Query Frame = 1
Query:   82 NRDDHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGNGMVDLGAPYDVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAK-GED--PAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLYR 921
            N +D + SA+SG+G + V   T R+LV + ++   L  +  DALGR   C++L ++G++D +  Q +  GDGPL GI+AIA+G G VRGYVGN  +       +   +GKG + VV+NHPD+  PY+GI  +R+  +  D+  YL +S+Q  S A+ A   V G L   AGGYL+E LP  SEET+K+   N+A L+ K G D  P  LL  G+TP  IAE +L+G+  +  L   +P+  CHC+ ER+FRA+RLL  EEV DI+ +EE IE +C+FCG++YR
Sbjct:   97 NLNDQVFSAISGDGGIKVTAATVRNLVNEFMIMHSLTEVPIDALGRTATCSVLLSNGMQDEQVFQVSMNGDGPLRGIVAIANGKGEVRGYVGNPGI---GSMSLQEAVGKGTVNVVKNHPDWPNPYNGITAIRDGDIDRDIGIYLAESEQR-SCALAAATTVNGILCTSAGGYLVEQLPDCSEETMKRVETNLATLVEKDGTDKLPTGLLNTGVTPLEIAEIILDGLD-MKPLQQIEPKAACHCTEERLFRAVRLLPKEEVDDILKKEEQIEARCQFCGKVYR 374          
BLAST of jgi.p|Trimin1|176874 vs. uniprot
Match: A0A7S1ZBL5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBL5_TRICV)

HSP 1 Score: 227 bits (578), Expect = 4.720e-67
Identity = 127/291 (43.64%), Postives = 183/291 (62.89%), Query Frame = 1
Query:   70 SPMTNRD---DHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGNGMVDLGAPYDVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAK-GEDPAV---LLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLYR 921
            SP  N+    D + SA+S +G + V   T R+LV D ++   L  + ADALGR M C++L ++G++D +  Q T  GDGPL G+++I+DG G VRGYVG   +       +   +GKGV+KVV+NHP +  PY+GI  +    +  DV  YL +S+Q  S A+ A   V+G L + AGGYL+E LP   +ET++    N+ARL+ + G   AV   LL DG+TP  IAE +LEG+G +  L   +P  KC CS ER+ R+LRLL   EV++I+A+EE IE +C+FCG++YR
Sbjct:  186 SPYENKSNVRDQVFSAMSSDGGIKVTACTVRNLVNDVMMMHSLTAVPADALGRAMACSVLLSNGMQDEQVFQMTVDGDGPLRGVVSISDGLGQVRGYVGTPAL---GDIPLKEAVGKGVIKVVKNHPTWPNPYNGISAMSYMDIDRDVGIYLAESEQR-SCALAAATSVSGILCKAAGGYLVERLPDCPDETMRTVEVNLARLVERDGTTDAVPTGLLLDGVTPLEIAEVVLEGLG-MEPLQQIEPRAKCRCSEERLLRSLRLLPRAEVEEILAKEEQIEARCQFCGRVYR 471          
BLAST of jgi.p|Trimin1|176874 vs. uniprot
Match: A0A0G4ETJ1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ETJ1_VITBC)

HSP 1 Score: 220 bits (561), Expect = 6.370e-66
Identity = 124/288 (43.06%), Postives = 186/288 (64.58%), Query Frame = 1
Query:   79 TNRDDHLISALSGNGEVLVKCITARSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGPLNGILAIADGTGGVRGYVGN-----GMVDLGAPYDVSV--GIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAKGEDPAVLLADGMTPAAIAEALLEGVGGINSLTIT-KPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLY 918
            +N  D L+SALS +G ++V+ ++AR+LVQDA+++  L P+ A ALG V VC LL ASGLKDRE LQ T AG+GP++GI +IADG G V+  +       G  D     + S+  GIG+G +++VR+HPD+ +P+  I E+RN  +  +VA  L +++Q  S AI AGV+V+GALV+ A GY +E LP ASEET+++  +N+  L  K +  + L   G+T   + + +LEGVG ++    T  P YKC CS ER    L+ L   E++ I+ ++E +E+ C FCG++Y
Sbjct:   10 SNAHDTLVSALSADGGIVVRAVSARNLVQDALIRLQLSPVPAQALGEVAVCNLLLASGLKDREQLQLTIAGNGPISGITSIADGHGDVKAMLQGDRKFTGQQDASGSREKSIRRGIGRGQIQLVRSHPDWIQPFQSITEIRNVSIPINVAFALLETEQRTS-AIDAGVEVSGALVQAAAGYYVERLPDASEETLQRVEENLKGL--KNDSLSTLFRSGLTAPDLVDRILEGVGVMHGTYSTGAPSYKCSCSPERFLYRLKALPRPELEQIILKQEILEMTCAFCGEVY 294          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176874 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CL44_9STRA4.690e-224100.00Heat shock protein Hsp33 n=1 Tax=Tribonema minus T... [more]
D8LMK8_ECTSI1.620e-11459.03Heat shock protein 33 n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5KBS9_9PHAE2.280e-11159.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A448ZMK1_9STRA1.640e-7143.66Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B5Y5I8_PHATC1.190e-7043.66Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1E7EWZ2_9STRA7.440e-7042.05Hsp33 domain-containing protein n=1 Tax=Fragilario... [more]
A0A1Z5JWD9_FISSO9.970e-7043.11Molecular chaperone Hsp33 n=2 Tax=Fistulifera sola... [more]
A0A6V2EEP6_9STRA2.510e-6944.17Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1ZBL5_TRICV4.720e-6743.64Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A0G4ETJ1_VITBC6.370e-6643.06Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_143contigContig_143:52897..54534 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|176874|e_gw1.143.47.1
BRITEko00000,ko03110
KEGG koko:K04083
DescriptionHsp33 protein
COG categoryO
Max annot lvl2836|Bacillariophyta
EggNOG OGsCOG1281@1|root,2QRJN@2759|Eukaryota,2XEIF@2836|Bacillariophyta
Evalue1.94e-71
Seed ortholog2850.Phatr33525
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionheat shock protein 33
Ec32 orthologEc-05_003110.1
TranscriptId177196
TrackFilteredModels1
ProteinId176874
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176874gene_14307Tribonema minus UTEX_B_3156 geneContig_143 52897..54534 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176874Trimin1|176874|e_gw1.143.47.1Tribonema minus UTEX_B_3156 polypeptideContig_143 52897..54534 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14307_3exon_14307_3Tribonema minus UTEX_B_3156 exonContig_143 52897..53525 -
exon_14307_2exon_14307_2Tribonema minus UTEX_B_3156 exonContig_143 53868..53967 -
exon_14307_1exon_14307_1Tribonema minus UTEX_B_3156 exonContig_143 54310..54534 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14307CDS_14307Tribonema minus UTEX_B_3156 CDSContig_143 54310..54534 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14307 ID=mRNA_14307|Name=jgi.p|Trimin1|176874|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=954bp|location=Sequence derived from alignment at Contig_143:52897..54534- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGGTCCCACAGGGTCGTGCGTCGTCCTCAACTGCTGCCAGTTCAATC
ATCGCTCAACATCGAGCCATCGCCCATGACGAATAGAGACGACCATCTTA
TCAGCGCATTGAGTGGCAACGGTGAAGTGCTTGTCAAGTGCATTACAGCA
CGGAGTCTGGTGCAGGACGCTGTGGTGAAACAAGACTTGAGACCACTTGC
CGCCGATGCATTGGGACGAGTCATGGTCTGCACGCTGCTATGTGCTTCCG
GCCTCAAGGACAGGGAGACATTGCAGTTCACATTTGCAGGCGATGGACCT
TTGAATGGCATCCTCGCTATTGCAGACGGGACGGGCGGCGTGAGGGGCTA
CGTGGGCAACGGCATGGTGGATCTGGGCGCTCCATACGATGTCAGCGTGG
GGATAGGGAAGGGCGTTCTCAAAGTTGTGCGCAATCACCCCGACTACGAA
CGCCCGTACAGCGGCATCGTGGAGCTGCGCAACTCGCAGGTCGCATACGA
CGTGGCGGGCTACCTGCGCGACTCGCAACAGTCAGACAGCGTCGCCATCG
GCGCGGGGGTCAAGGTTGCGGGGGCGCTCGTGCGCCAGGCGGGGGGGTAC
CTCATGGAGACCCTGCCGGGGGCCAGCGAGGAGACCATCAAGCAGTGCGC
GGACAACGTCGCACGCCTCATGGCCAAGGGCGAAGACCCTGCAGTGTTGT
TGGCGGATGGAATGACGCCCGCTGCCATTGCGGAGGCACTGCTGGAGGGG
GTTGGGGGCATTAACAGCCTCACCATCACCAAGCCCGAGTACAAGTGCCA
CTGCTCGTCCGAGAGGGTGTTCCGCGCGCTGCGGCTGCTGGGCACGGAGG
AGGTCAAAGACATAATGGCGCGGGAGGAGAACATTGAGGTCAAATGCGAG
TTCTGTGGCCAGCTGTACAGGTGCGCCTTGCTGCATCCAGCACCCCCATT
GTAA
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protein sequence of jgi.p|Trimin1|176874

>Trimin1|176874|e_gw1.143.47.1 ID=Trimin1|176874|e_gw1.143.47.1|Name=jgi.p|Trimin1|176874|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=318bp
MRSHRVVRRPQLLPVQSSLNIEPSPMTNRDDHLISALSGNGEVLVKCITA
RSLVQDAVVKQDLRPLAADALGRVMVCTLLCASGLKDRETLQFTFAGDGP
LNGILAIADGTGGVRGYVGNGMVDLGAPYDVSVGIGKGVLKVVRNHPDYE
RPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGY
LMETLPGASEETIKQCADNVARLMAKGEDPAVLLADGMTPAAIAEALLEG
VGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCE
FCGQLYRCALLHPAPPL*
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mRNA from alignment at Contig_143:52897..54534-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14307 ID=mRNA_14307|Name=jgi.p|Trimin1|176874|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1638bp|location=Sequence derived from alignment at Contig_143:52897..54534- (Tribonema minus UTEX_B_3156 )
ATGCGGTCCCACAGGGTCGTGCGTCGTCCTCAACTGCTGCCAGTTCAATC ATCGCTCAACATCGAGCCATCGCCCATGACGAATAGAGACGACCATCTTA TCAGCGCATTGAGTGGCAACGGTGAAGTGCTTGTCAAGTGCATTACAGCA CGGAGTCTGGTGCAGGACGCTGTGGTGAAACAAGACTTGAGACCACTTGC CGCCGATGCATTGGGACGAGTCATGGTGAGCTTGTACATGTTTGCCTAAT ACATCTATTGTGCTGCATTATGTTAGTCGCTAGTGTCTCGAGTAACATTT GTCAAGCACAGCGCACGTCGCTGTGTTCACGGTGTGTAGTCACCACTAGC AGTTGAGGTTGCTCGCGCTGACGAGTTGCAACAGAGGTGCAACAAGAAGC TTTGAAGACTTTCGACGCCTCATGTGACGAGTCTGCGAAGCATTCATGAG CTGAGTGCAGCACGACTTGATGTGCAAAGTGATGCTCAGTCCTATCCTGT CCACTGGCATCATATTGGCACTCATTCGGGAGTGCTTGTTTGTTCAATGC CCCTCTCATGGCGTCAGGTCTGCACGCTGCTATGTGCTTCCGGCCTCAAG GACAGGGAGACATTGCAGTTCACATTTGCAGGCGATGGACCTTTGAATGG CATCCTCGCTATTGCAGGTAATGTCTTCAACGCCCGCAATGGCGGACAGT GATGATGCATCATCAAATGTGCTGCAGCCCAGTTTCTGTTTTTAGCGGTG CTTTTGCAAGAAGCGTTGCGCTAATCGATTGCAATTATATAGCTTTGCAA GCAAGCAGCAATACATACGTTATACCAATGATGCTACACATGTGTCATTC CATCGTCATAGGTGGTGCATTGCAGCTAGCTTTCCACTGCAAAGGTACAC TTCTTGATGTGTGGCACTGACAATGGCCGGCCATGCATGTCACATGATGG CATGGCCTTGTATTATTCAATAGTGGTATTGCCTTATACTGCGCTTGTCA CATGCGCAGACGGGACGGGCGGCGTGAGGGGCTACGTGGGCAACGGCATG GTGGATCTGGGCGCTCCATACGATGTCAGCGTGGGGATAGGGAAGGGCGT TCTCAAAGTTGTGCGCAATCACCCCGACTACGAACGCCCGTACAGCGGCA TCGTGGAGCTGCGCAACTCGCAGGTCGCATACGACGTGGCGGGCTACCTG CGCGACTCGCAACAGTCAGACAGCGTCGCCATCGGCGCGGGGGTCAAGGT TGCGGGGGCGCTCGTGCGCCAGGCGGGGGGGTACCTCATGGAGACCCTGC CGGGGGCCAGCGAGGAGACCATCAAGCAGTGCGCGGACAACGTCGCACGC CTCATGGCCAAGGGCGAAGACCCTGCAGTGTTGTTGGCGGATGGAATGAC GCCCGCTGCCATTGCGGAGGCACTGCTGGAGGGGGTTGGGGGCATTAACA GCCTCACCATCACCAAGCCCGAGTACAAGTGCCACTGCTCGTCCGAGAGG GTGTTCCGCGCGCTGCGGCTGCTGGGCACGGAGGAGGTCAAAGACATAAT GGCGCGGGAGGAGAACATTGAGGTCAAATGCGAGTTCTGTGGCCAGCTGT ACAGGTGCGCCTTGCTGCATCCAGCACCCCCATTGTAA
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Coding sequence (CDS) from alignment at Contig_143:52897..54534-

>mRNA_14307 ID=mRNA_14307|Name=jgi.p|Trimin1|176874|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=954bp|location=Sequence derived from alignment at Contig_143:52897..54534- (Tribonema minus UTEX_B_3156 )
ATGCGGTCCCACAGGGTCGTGCGTCGTCCTCAACTGCTGCCAGTTCAATC
ATCGCTCAACATCGAGCCATCGCCCATGACGAATAGAGACGACCATCTTA
TCAGCGCATTGAGTGGCAACGGTGAAGTGCTTGTCAAGTGCATTACAGCA
CGGAGTCTGGTGCAGGACGCTGTGGTGAAACAAGACTTGAGACCACTTGC
CGCCGATGCATTGGGACGAGTCATGGTCTGCACGCTGCTATGTGCTTCCG
GCCTCAAGGACAGGGAGACATTGCAGTTCACATTTGCAGGCGATGGACCT
TTGAATGGCATCCTCGCTATTGCAGACGGGACGGGCGGCGTGAGGGGCTA
CGTGGGCAACGGCATGGTGGATCTGGGCGCTCCATACGATGTCAGCGTGG
GGATAGGGAAGGGCGTTCTCAAAGTTGTGCGCAATCACCCCGACTACGAA
CGCCCGTACAGCGGCATCGTGGAGCTGCGCAACTCGCAGGTCGCATACGA
CGTGGCGGGCTACCTGCGCGACTCGCAACAGTCAGACAGCGTCGCCATCG
GCGCGGGGGTCAAGGTTGCGGGGGCGCTCGTGCGCCAGGCGGGGGGGTAC
CTCATGGAGACCCTGCCGGGGGCCAGCGAGGAGACCATCAAGCAGTGCGC
GGACAACGTCGCACGCCTCATGGCCAAGGGCGAAGACCCTGCAGTGTTGT
TGGCGGATGGAATGACGCCCGCTGCCATTGCGGAGGCACTGCTGGAGGGG
GTTGGGGGCATTAACAGCCTCACCATCACCAAGCCCGAGTACAAGTGCCA
CTGCTCGTCCGAGAGGGTGTTCCGCGCGCTGCGGCTGCTGGGCACGGAGG
AGGTCAAAGACATAATGGCGCGGGAGGAGAACATTGAGGTCAAATGCGAG
TTCTGTGGCCAGCTGTACAGGTGCGCCTTGCTGCATCCAGCACCCCCATT
GTAA
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