Trimin1|353056|estExt_Genemark1.C_Ctg_1420022 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353056
Unique NameTrimin1|353056|estExt_Genemark1.C_Ctg_1420022
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length189
Homology
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A835Z943_9STRA (Integral membrane protein DUF106-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z943_9STRA)

HSP 1 Score: 362 bits (929), Expect = 2.220e-126
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
Query:    1 MALASIAAVCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQKKTFASQWAELEAKNR 188
            MALASIAAVCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQKKTFASQWAELEAKNR
Sbjct:    1 MALASIAAVCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQKKTFASQWAELEAKNR 188          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A7S4I6A2_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4I6A2_9EUKA)

HSP 1 Score: 71.6 bits (174), Expect = 2.900e-12
Identity = 39/104 (37.50%), Postives = 58/104 (55.77%), Query Frame = 0
Query:   73 LEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQKKTF 176
            LEKE + T   L   K +A++ TA   +   ++L   ++GLV+  LPF      R +THRGLEGDDYR+  V  ++I+ +M M+  + + LG   PK    KT 
Sbjct:   69 LEKEVDATNRDLTLFKMRANMATAFMHMLTFYSLKTNYEGLVIARLPFEPFAMIRGITHRGLEGDDYRECGVILVYIICSMAMKPNLQRVLGHAPPKTAMPKTI 172          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A6V1S8S1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S8S1_HETAK)

HSP 1 Score: 70.5 bits (171), Expect = 1.310e-11
Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 0
Query:   19 AELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALY----------KTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGS 165
            AE L R + +    + +      RL    E++K DA+           K D   R ++ K +E +E +       L+A + KA+      MI+  W +N+ FKG+VV  LPF+     + +THRGL+G+D+   S+TF++ L ++ +R  I K +GS
Sbjct:   24 AEGLGRYFVFSKPHYVEKKDKLIRLFRLYEQKKADAMVVKKKDKIAKSKKDTDPRKKQKKMLEGIEADLRKEMKELKALEVKANFSNGAVMIALFWVMNKMFKGVVVGRLPFQPITFIQRMTHRGLDGEDFFDCSMTFIYTLASLGLRPSIKKLIGS 180          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A2T9YU79_9FUNG (Uncharacterized protein n=2 Tax=Harpellales TaxID=61421 RepID=A0A2T9YU79_9FUNG)

HSP 1 Score: 65.1 bits (157), Expect = 9.220e-10
Identity = 42/154 (27.27%), Postives = 78/154 (50.65%), Query Frame = 0
Query:   17 VGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKA 170
            + +E++N   +Y TEAF    +T     E+++K + D          A++ K ++ L+ + NL  +       ++S+V+ +     ++ +   +    V   PF     F+ LTHRGL+GDDY QIS  F+F++ ++  + +ID      +PKA
Sbjct:   16 ISSEVVNYYLFYRTEAFKNHKKTIILNKEKLKKEESDTSGNV-----AKKKKKIDALKAQLNLATSQGATYMIRSSIVSVLLQFVYMYIVGTVYDKTPVGKFPFTPFGLFQSLTHRGLDGDDYTQISCVFVFVMASVSTKAIIDMIFDFGLPKA 164          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A164X6L5_DAUCS (Calcium load-activated calcium channel n=2 Tax=asterids TaxID=71274 RepID=A0A164X6L5_DAUCS)

HSP 1 Score: 60.8 bits (146), Expect = 3.880e-8
Identity = 43/161 (26.71%), Postives = 78/161 (48.45%), Query Frame = 0
Query:    9 VCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPK 169
            +C A +C   + LL     Y T ++  L  T D+  +++E  K D        ++++  K ++ +E     +   L   KFK+  V A+ +      LN  F+G  V  LPF      + ++HRGL+G+D+   S+ F++ L ++ +R  + K LG   P+
Sbjct:   22 ICTAIVCEAISWLL----IYRTSSYKSLKSTIDKASKKLETMKTDPTAPKISAKKSK-TKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGFLNNLFEGKAVAKLPFVPIKLVQKMSHRGLQGEDFTDCSMAFLYFLCSISIRTNLQKFLGFSPPR 177          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A078A2A8_STYLE (Phosphatidylserine decarboxylase n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A2A8_STYLE)

HSP 1 Score: 61.2 bits (147), Expect = 1.240e-7
Identity = 45/149 (30.20%), Postives = 79/149 (53.02%), Query Frame = 0
Query:   28 YDTEAFAKLVRTFDRLDEEIEKRKFDALY-------KTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPK 169
            Y  + +  L+   ++L ++IEK+K   +Y       KT DK+    L+  E+L K+    +  LQ  +  ++   A+ MI  V  L+  ++G+VV  LPF      R +THR + G+DY   S+ F++IL+ + +R ++ K LG   P+
Sbjct:  606 YRHQEYKTLISNVEQLSKKIEKQKEQQIYQGAAAKNKTQDKK----LQQNESLLKQ---YQQDLQKQRMASTFFVALFMIIFVSLLSNAYQGVVVAKLPFEPISFMRNITHRSIVGNDYTDCSMIFIYILSNVSLRPIMQKLLGLSGPR 747          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A0V1MUI7_9BILA (Calcium load-activated calcium channel n=14 Tax=Trichinella TaxID=6333 RepID=A0A0V1MUI7_9BILA)

HSP 1 Score: 58.9 bits (141), Expect = 1.840e-7
Identity = 45/178 (25.28%), Postives = 89/178 (50.00%), Query Frame = 0
Query:    1 MALASIAAVCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEK-EKNLTETALQATKFKASLVTAVGMI--SGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQKKT 175
            M L S+  V ++   +   E L     Y +E + ++    DR  + +E++K        D+    E      LEK E+ L  +    ++FK   + A+G+   + + T +  F+G+ +  LPF      R ++HR L GD++++ S  F+++++AM +R+ + K LG    +A+ K++
Sbjct:    4 MFLLSLLTVFISLFTAAVGEALTYALVYRSEQYKRMKAEIDRQAKRLERKK--------DQGNEIERSNKRKLEKQEERLKVSNRDLSQFKMRSMFAIGLAFTALLTTFSSIFEGITIAKLPFEPISLMRGISHRNLPGDNFKECSFIFLYVMSAMSIRQSLQKVLGFAPSRAMAKQS 173          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A0L0FIH3_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FIH3_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 4.360e-7
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 0
Query:   84 LQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRL---LTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGS 165
            L   K  A    AV  IS + ++N  F G+V   LPF    PF L   +THRGL+G+DYR+ S  F++++    +R V+ K LG+
Sbjct:  103 LNRMKMFAMFAQAVVFISVMSSVNNTFGGIVFAKLPFM---PFSLAQNITHRGLDGEDYREASFLFIYVMCTTALRPVVPKLLGT 184          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A830H623_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H623_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 4.750e-7
Identity = 46/168 (27.38%), Postives = 74/168 (44.05%), Query Frame = 0
Query:   14 LCSVGA----ELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRAREL-----KGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQ 172
            L SVG+    E LN    Y T  +  L  +  R  + +E  K           + ++      K  +  E+    T   L   K K+++V  V +      L+  + G+ V  LPF  P   + ++HRGL G+D R  S+ F+++L +M  +  I K LG   P+A Q
Sbjct:   27 LVSVGSALFCEALNWLVLYRTSTYKSLAESLKRTSKRLESAKAAXXXXXPTSSKGKQASSSKTKKADRFERTMQETSRDLSLVKLKSTVVMTVTLSLMYGVLSASYDGMPVARLPFDPPGFVQGISHRGLVGEDMRDCSMAFLYMLCSMSFKTNIQKALGFAPPRAAQ 194          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A0N4X0T9_HAEPC (Phenylalanine--tRNA ligase beta subunit n=3 Tax=Haemonchidae TaxID=126387 RepID=A0A0N4X0T9_HAEPC)

HSP 1 Score: 59.3 bits (142), Expect = 5.640e-7
Identity = 49/174 (28.16%), Postives = 80/174 (45.98%), Query Frame = 0
Query:    9 VCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPF-RLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQKKTFASQWA 181
            + +A   ++  E L     Y +E + +L    +R  + +EK+K +     D   + R    +E  E+    T   +   K K+     +   + + T N  F G VV  LPF  P  F + L+HR L GDD R  S  F++IL  M +R+ + K LG    +A+ ++   S WA
Sbjct:  548 IAIAFCTALAGEGLTYVLVYRSEQYKRLKSEMERKTKRLEKKKQEVGEVVDKNAKKR----LERDEERLKATNRDMSMFKMKSMFAIGLAFTALLSTFNSIFDGRVVARLPF-VPIGFLQGLSHRNLVGDDMRDCSFIFLYILCTMTIRQNLQKALGFAPSRAMNRQQ-GSAWA 715          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A835Z943_9STRA2.220e-126100.00Integral membrane protein DUF106-domain-containing... [more]
A0A7S4I6A2_9EUKA2.900e-1237.50Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A6V1S8S1_HETAK1.310e-1130.57Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A2T9YU79_9FUNG9.220e-1027.27Uncharacterized protein n=2 Tax=Harpellales TaxID=... [more]
A0A164X6L5_DAUCS3.880e-826.71Calcium load-activated calcium channel n=2 Tax=ast... [more]
A0A078A2A8_STYLE1.240e-730.20Phosphatidylserine decarboxylase n=1 Tax=Stylonych... [more]
A0A0V1MUI7_9BILA1.840e-725.28Calcium load-activated calcium channel n=14 Tax=Tr... [more]
A0A0L0FIH3_9EUKA4.360e-738.82Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A830H623_9CHLO4.750e-727.38Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
A0A0N4X0T9_HAEPC5.640e-728.16Phenylalanine--tRNA ligase beta subunit n=3 Tax=Ha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..90
IPR002809Integral membrane protein EMC3/TMCO1-likeSMARTSM01415DUF106_2coord: 4..167
e-value: 2.3E-4
score: 28.7
IPR002809Integral membrane protein EMC3/TMCO1-likePFAMPF01956EMC3_TMCO1coord: 9..165
e-value: 5.9E-17
score: 61.9
IPR008559Calcium load-activated calcium channelPANTHERPTHR20917PNAS-RELATEDcoord: 8..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_142contigContig_142:196165..198510 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353056mRNA_16000Tribonema minus UTEX_B_3156 mRNAContig_142 196134..198540 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353056|estExt_Genemark1.C_Ctg_1420022 ID=Trimin1|353056|estExt_Genemark1.C_Ctg_1420022|Name=jgi.p|Trimin1|353056|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=189bp
MALASIAAVCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKR
KFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMI
SGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFIL
TAMLMRRVIDKKLGSPMPKALQKKTFASQWAELEAKNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002809EMC3/TMCO1
IPR008559TMCO1