mRNA_16000 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353056
Unique NamemRNA_16000
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A835Z943_9STRA (Integral membrane protein DUF106-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z943_9STRA)

HSP 1 Score: 363 bits (933), Expect = 1.220e-126
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
Query:   31 MALASIAAVCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQKKTFASQWAELEAKNR 594
            MALASIAAVCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQKKTFASQWAELEAKNR
Sbjct:    1 MALASIAAVCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQKKTFASQWAELEAKNR 188          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A7S4I6A2_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4I6A2_9EUKA)

HSP 1 Score: 71.6 bits (174), Expect = 4.570e-12
Identity = 39/104 (37.50%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  247 LEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQKKTF 558
            LEKE + T   L   K +A++ TA   +   ++L   ++GLV+  LPF      R +THRGLEGDDYR+  V  ++I+ +M M+  + + LG   PK    KT 
Sbjct:   69 LEKEVDATNRDLTLFKMRANMATAFMHMLTFYSLKTNYEGLVIARLPFEPFAMIRGITHRGLEGDDYRECGVILVYIICSMAMKPNLQRVLGHAPPKTAMPKTI 172          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A6V1S8S1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S8S1_HETAK)

HSP 1 Score: 70.5 bits (171), Expect = 2.050e-11
Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 1
Query:   85 AELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALY----------KTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGS 525
            AE L R + +    + +      RL    E++K DA+           K D   R ++ K +E +E +       L+A + KA+      MI+  W +N+ FKG+VV  LPF+     + +THRGL+G+D+   S+TF++ L ++ +R  I K +GS
Sbjct:   24 AEGLGRYFVFSKPHYVEKKDKLIRLFRLYEQKKADAMVVKKKDKIAKSKKDTDPRKKQKKMLEGIEADLRKEMKELKALEVKANFSNGAVMIALFWVMNKMFKGVVVGRLPFQPITFIQRMTHRGLDGEDFFDCSMTFIYTLASLGLRPSIKKLIGS 180          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A2T9YU79_9FUNG (Uncharacterized protein n=2 Tax=Harpellales TaxID=61421 RepID=A0A2T9YU79_9FUNG)

HSP 1 Score: 65.1 bits (157), Expect = 1.390e-9
Identity = 44/157 (28.03%), Postives = 80/157 (50.96%), Query Frame = 1
Query:   70 LCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKA 540
            LC + +E++N   +Y TEAF    +T     E+++K + D          A++ K ++ L+ + NL  +       ++S+V+ +     ++ +   +    V   PF     F+ LTHRGL+GDDY QIS  F+F++ ++  + +ID      +PKA
Sbjct:   14 LC-ISSEVVNYYLFYRTEAFKNHKKTIILNKEKLKKEESDTSGNV-----AKKKKKIDALKAQLNLATSQGATYMIRSSIVSVLLQFVYMYIVGTVYDKTPVGKFPFTPFGLFQSLTHRGLDGDDYTQISCVFVFVMASVSTKAIIDMIFDFGLPKA 164          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A164X6L5_DAUCS (Calcium load-activated calcium channel n=2 Tax=asterids TaxID=71274 RepID=A0A164X6L5_DAUCS)

HSP 1 Score: 62.0 bits (149), Expect = 2.150e-8
Identity = 42/162 (25.93%), Postives = 79/162 (48.77%), Query Frame = 1
Query:   52 AVCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPK 537
            ++C A +C    E ++    Y T ++  L  T D+  +++E  K D        ++++  K ++ +E     +   L   KFK+  V A+ +      LN  F+G  V  LPF      + ++HRGL+G+D+   S+ F++ L ++ +R  + K LG   P+
Sbjct:   21 SICTAIVC----EAISWLLIYRTSSYKSLKSTIDKASKKLETMKTDPTAPKISAKKSK-TKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGFLNNLFEGKAVAKLPFVPIKLVQKMSHRGLQGEDFTDCSMAFLYFLCSISIRTNLQKFLGFSPPR 177          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A0V1MUI7_9BILA (Calcium load-activated calcium channel n=14 Tax=Trichinella TaxID=6333 RepID=A0A0V1MUI7_9BILA)

HSP 1 Score: 59.7 bits (143), Expect = 1.390e-7
Identity = 45/178 (25.28%), Postives = 89/178 (50.00%), Query Frame = 1
Query:   31 MALASIAAVCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEK-EKNLTETALQATKFKASLVTAVGMI--SGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQKKT 555
            M L S+  V ++   +   E L     Y +E + ++    DR  + +E++K        D+    E      LEK E+ L  +    ++FK   + A+G+   + + T +  F+G+ +  LPF      R ++HR L GD++++ S  F+++++AM +R+ + K LG    +A+ K++
Sbjct:    4 MFLLSLLTVFISLFTAAVGEALTYALVYRSEQYKRMKAEIDRQAKRLERKK--------DQGNEIERSNKRKLEKQEERLKVSNRDLSQFKMRSMFAIGLAFTALLTTFSSIFEGITIAKLPFEPISLMRGISHRNLPGDNFKECSFIFLYVMSAMSIRQSLQKVLGFAPSRAMAKQS 173          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A078A2A8_STYLE (Phosphatidylserine decarboxylase n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A2A8_STYLE)

HSP 1 Score: 61.2 bits (147), Expect = 1.940e-7
Identity = 45/149 (30.20%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  112 YDTEAFAKLVRTFDRLDEEIEKRKFDALY-------KTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPK 537
            Y  + +  L+   ++L ++IEK+K   +Y       KT DK+    L+  E+L K+    +  LQ  +  ++   A+ MI  V  L+  ++G+VV  LPF      R +THR + G+DY   S+ F++IL+ + +R ++ K LG   P+
Sbjct:  606 YRHQEYKTLISNVEQLSKKIEKQKEQQIYQGAAAKNKTQDKK----LQQNESLLKQ---YQQDLQKQRMASTFFVALFMIIFVSLLSNAYQGVVVAKLPFEPISFMRNITHRSIVGNDYTDCSMIFIYILSNVSLRPIMQKLLGLSGPR 747          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A0L0FIH3_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FIH3_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 6.280e-7
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 1
Query:  280 LQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRL---LTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGS 525
            L   K  A    AV  IS + ++N  F G+V   LPF    PF L   +THRGL+G+DYR+ S  F++++    +R V+ K LG+
Sbjct:  103 LNRMKMFAMFAQAVVFISVMSSVNNTFGGIVFAKLPFM---PFSLAQNITHRGLDGEDYREASFLFIYVMCTTALRPVVPKLLGT 184          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A0N4X0T9_HAEPC (Phenylalanine--tRNA ligase beta subunit n=3 Tax=Haemonchidae TaxID=126387 RepID=A0A0N4X0T9_HAEPC)

HSP 1 Score: 59.7 bits (143), Expect = 6.430e-7
Identity = 49/174 (28.16%), Postives = 80/174 (45.98%), Query Frame = 1
Query:   55 VCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPF-RLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQKKTFASQWA 573
            + +A   ++  E L     Y +E + +L    +R  + +EK+K +     D   + R    +E  E+    T   +   K K+     +   + + T N  F G VV  LPF  P  F + L+HR L GDD R  S  F++IL  M +R+ + K LG    +A+ ++   S WA
Sbjct:  548 IAIAFCTALAGEGLTYVLVYRSEQYKRLKSEMERKTKRLEKKKQEVGEVVDKNAKKR----LERDEERLKATNRDMSMFKMKSMFAIGLAFTALLSTFNSIFDGRVVARLPF-VPIGFLQGLSHRNLVGDDMRDCSFIFLYILCTMTIRQNLQKALGFAPSRAMNRQQ-GSAWA 715          
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Match: A0A830H623_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H623_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 6.850e-7
Identity = 46/168 (27.38%), Postives = 74/168 (44.05%), Query Frame = 1
Query:   70 LCSVGA----ELLNRKWYYDTEAFAKLVRTFDRLDEEIEKRKFDALYKTDDKRRAREL-----KGVENLEKEKNLTETALQATKFKASLVTAVGMISGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFILTAMLMRRVIDKKLGSPMPKALQ 546
            L SVG+    E LN    Y T  +  L  +  R  + +E  K           + ++      K  +  E+    T   L   K K+++V  V +      L+  + G+ V  LPF  P   + ++HRGL G+D R  S+ F+++L +M  +  I K LG   P+A Q
Sbjct:   27 LVSVGSALFCEALNWLVLYRTSTYKSLAESLKRTSKRLESAKAAXXXXXPTSSKGKQASSSKTKKADRFERTMQETSRDLSLVKLKSTVVMTVTLSLMYGVLSASYDGMPVARLPFDPPGFVQGISHRGLVGEDMRDCSMAFLYMLCSMSFKTNIQKALGFAPPRAAQ 194          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353056 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A835Z943_9STRA1.220e-126100.00Integral membrane protein DUF106-domain-containing... [more]
A0A7S4I6A2_9EUKA4.570e-1237.50Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A6V1S8S1_HETAK2.050e-1130.57Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A2T9YU79_9FUNG1.390e-928.03Uncharacterized protein n=2 Tax=Harpellales TaxID=... [more]
A0A164X6L5_DAUCS2.150e-825.93Calcium load-activated calcium channel n=2 Tax=ast... [more]
A0A0V1MUI7_9BILA1.390e-725.28Calcium load-activated calcium channel n=14 Tax=Tr... [more]
A0A078A2A8_STYLE1.940e-730.20Phosphatidylserine decarboxylase n=1 Tax=Stylonych... [more]
A0A0L0FIH3_9EUKA6.280e-738.82Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A0N4X0T9_HAEPC6.430e-728.16Phenylalanine--tRNA ligase beta subunit n=3 Tax=Ha... [more]
A0A830H623_9CHLO6.850e-727.38Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_142contigContig_142:196134..198540 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353056|estExt_Genemark1.C_Ctg_1420022
KEGG TC1.A.106.1
BRITEko00000,ko02000
KEGG koko:K21891
DescriptionCalcium-selective channel required to prevent calcium stores from overfilling
COG categoryP
Max annot lvl422676|Aconoidasida
EggNOG OGsKOG3312@1|root,KOG3312@2759|Eukaryota,3YB2R@5794|Apicomplexa,3KB9N@422676|Aconoidasida,3YZD1@5819|Haemosporida
Evalue9.88e-16
Seed ortholog5833.PF13_0331
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionUncharacterised conserved protein UCP023322, transmembrane eukaryotic
Ec32 orthologEc-27_001280.1
TranscriptId353378
TrackFilteredModels1
ProteinId353056
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353056gene_16000Tribonema minus UTEX_B_3156 geneContig_142 196134..198540 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353056Trimin1|353056|estExt_Genemark1.C_Ctg_1420022Tribonema minus UTEX_B_3156 polypeptideContig_142 196165..198510 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16000_4exon_16000_4Tribonema minus UTEX_B_3156 exonContig_142 196134..196444 -
exon_16000_3exon_16000_3Tribonema minus UTEX_B_3156 exonContig_142 198016..198131 -
exon_16000_2exon_16000_2Tribonema minus UTEX_B_3156 exonContig_142 198243..198288 -
exon_16000_1exon_16000_1Tribonema minus UTEX_B_3156 exonContig_142 198386..198540 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_16000UTR3_16000Tribonema minus UTEX_B_3156 three_prime_UTRContig_142 196134..196164 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16000CDS_16000Tribonema minus UTEX_B_3156 CDSContig_142 198386..198510 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_16000UTR5_16000Tribonema minus UTEX_B_3156 five_prime_UTRContig_142 198511..198540 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16000 ID=mRNA_16000|Name=jgi.p|Trimin1|353056|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=628bp|location=Sequence derived from alignment at Contig_142:196134..198540- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCCAAACTTGGCTGAAAGATCACCGTCAGCATGGCTCTCGCCAGCATAGC
GGCCGTGTGTTTGGCTGCGCTGTGCAGCGTGGGCGCTGAATTGCTGAATC
GGAAGTGGTACTACGATACAGAAGCTTTCGCGAAGTTGGTGCGCACCTTT
GATAGGCTTGATGAGGAGATCGAGAAGCGGAAGTTTGACGCGCTGTACAA
GACTGACGACAAGAGGCGAGCTCGTGAACTGAAAGGAGTCGAGAACCTCG
AAAAGGAGAAAAACCTGACGGAGACTGCGTTGCAGGCGACAAAGTTCAAG
GCGTCATTGGTGACAGCGGTGGGCATGATCTCAGGCGTCTGGACTCTGAA
CCGCTTCTTCAAGGGGCTTGTGGTGTTCACACTGCCATTTCGCGCACCAT
TCCCATTCCGGCTGCTGACTCACCGAGGGTTAGAGGGGGACGACTACCGT
CAGATTTCTGTGACGTTCATGTTCATTCTCACAGCCATGCTGATGAGGCG
CGTGATTGACAAGAAGCTGGGCTCGCCAATGCCAAAGGCACTGCAGAAAA
AGACATTTGCGAGCCAGTGGGCGGAACTTGAAGCCAAGAATAGATGAAGG
GCACTGTGTGATGGTGAGCAACCGTTTT
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protein sequence of jgi.p|Trimin1|353056

>Trimin1|353056|estExt_Genemark1.C_Ctg_1420022 ID=Trimin1|353056|estExt_Genemark1.C_Ctg_1420022|Name=jgi.p|Trimin1|353056|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=189bp
MALASIAAVCLAALCSVGAELLNRKWYYDTEAFAKLVRTFDRLDEEIEKR
KFDALYKTDDKRRARELKGVENLEKEKNLTETALQATKFKASLVTAVGMI
SGVWTLNRFFKGLVVFTLPFRAPFPFRLLTHRGLEGDDYRQISVTFMFIL
TAMLMRRVIDKKLGSPMPKALQKKTFASQWAELEAKNR*
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mRNA from alignment at Contig_142:196134..198540-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16000 ID=mRNA_16000|Name=jgi.p|Trimin1|353056|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2407bp|location=Sequence derived from alignment at Contig_142:196134..198540- (Tribonema minus UTEX_B_3156 )
CCCAAACTTGGCTGAAAGATCACCGTCAGCATGGCTCTCGCCAGCATAGC GGCCGTGTGTTTGGCTGCGCTGTGCAGCGTGGGCGCTGAATTGCTGAATC GGAAGTGGTACTACGATACAGAAGCTTTCGCGAAGTTGGTGCGCACCTTT GATAGGTGAGAACACCACTCCCTCTCTCTCAAGCTTGGTTCCCTTCACCC CTTGCCGCTGCATCTGCAAATTCACAATGCTTTTTGTCGCTCCCCCACGC AGGCTTGATGAGGAGATCGAGAAGCGGAAGTTTGACGCGCTGTACAAGGT GAGCTGGGCCCGTCGCTTTCGCTAGTGTCTGCTCTGCTTGTGGGCACCAC CTGCTTACAGTGCCTGCAACTCATGCCCTTGTCCCATGGTTGTCTACTGC TGCCCGCAGACTGACGACAAGAGGCGAGCTCGTGAACTGAAAGGAGTCGA GAACCTCGAAAAGGAGAAAAACCTGACGGAGACTGCGTTGCAGGCGACAA AGTTCAAGGCGTCATTGGTGACAGCGTGAGTAGTTCATACCAATGCCAAT TGTACAGTTCACTTGGATCCGCAGTTTGTGTAAAGGACAATTTGAGATAA TGTATCAACAGGTGGCCGTTTGCAAGTTGTTTTTTTAACGGATCAACGTG TAGACTAAGACTAATGCCCTCCTTGGTACGATGGGAGGCTACGTAGTGTA CCACTGATAAATGAATACAAATAGTCCCCTGTCTTGACATCTGGTGCAAA TAGTCCCCTGTCTTGACATCTGGTGCAGGCTCGCATCGAAAACACCCCTC ACCTTCAGGCAATCGCACATGGTAGACTACTTGAAGTTTGTGAAATCTCT TGCGTGGTGCATCTGGCAGTCACGGCAGGGGCACCAGGGCGCTGGTGATC AGCCAAACCAGCAGCGCATGAAATTCAGGGGTTGTCCTGACTCCACGCTC GGAGTCGTCTCTGACTCCGCTCCGGCCAGAGCGGAGTCGGAGACGTCAGG CAGATCTCATTGCTCCGCGGAGTCGGAGAGTCGGAGTCGCTCGCTGAGCA AAGTTGCTGCGGCCGGAGTCGGAGCGGAGTCGTCCAGAGCACGGAGCGAA AGGCCCCGGTTTTGAGGTGTCGTAACAACCCCTGATGAAATTGCCTGTGG TGTGCGACCCCTGATGAAATTGCCTGTGGCGAAACCAGTTTGTTGCTCAC GCACCTAGCGAGCTTCATGAGGTGTGTGCAGCCAGCACAGCGTACCTTCG ACCACAAACAACAGCTGTACGACATCTGCTGCAAGCAAGGTTTGGCACTG TCTCAAGGTCTGGGGTGCCCTAGCAACTCATAAATGGCGTTACAGCAGGC TGAAGAAACACGGAATCCGGGGTAATCGAGCTGCTGTAAGCATAACACGC ACCACAAATCATCTGACATACCCACATGAGAGGGGGGGGGGGGGGGGCAT ATATGAGGCGCACTACTTCTGTCCTAGTGTTCAGCAGCCAGACCCAATGA GATCAGGGGTAAAACACCAGGGGGAAAGGGGGGTGTTATAGATAGCTTTC GACAACTGCCATAAAGTGCTGGGCGAGCCACCTTTAGAGGGTCCAGCAAA ACTCATCCCAGGAGTACACACACACTTGAACGTTCTTTGCAGCACTACGC AGCGGGGACAAGTCAGGTTTGGCTTGATGTGAACTACGATCCCCTCAAGC ATGAGGGCCATTCATGCATGGCACTCTCTGGCAATTAGTCACCTCATTGA GCCAGAAGTATTCAGCTACATATAAGTGAAGTATTCAGCTCCATAGCAGT GGTATGGTGATAGTGCAAGGTTGTGGTGCAACTATGACTGAGCTTGCATA CGTCAAAACCTCAGGCTTCAAAAGGTATCTAGCATCCAGTGCGAACGCCG AACATCAGCAGCACATTGTGATTCACAGGTGTGAACTGCATTTGAACATG ATAACCCTTGAGAAACAGAAGCTTTTTTTGTGGCCTGTCATTTATCTGCA CAGGACCGCTCGTCACAAAGACAAAGCCAGTTTTGCTGCGCTTGTTGACC TCACCTTCTGCGTCTGCGTTGGTGTCATTGGTGTTCACCTCTGCAGGGTG GGCATGATCTCAGGCGTCTGGACTCTGAACCGCTTCTTCAAGGGGCTTGT GGTGTTCACACTGCCATTTCGCGCACCATTCCCATTCCGGCTGCTGACTC ACCGAGGGTTAGAGGGGGACGACTACCGTCAGATTTCTGTGACGTTCATG TTCATTCTCACAGCCATGCTGATGAGGCGCGTGATTGACAAGAAGCTGGG CTCGCCAATGCCAAAGGCACTGCAGAAAAAGACATTTGCGAGCCAGTGGG CGGAACTTGAAGCCAAGAATAGATGAAGGGCACTGTGTGATGGTGAGCAA CCGTTTT
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Coding sequence (CDS) from alignment at Contig_142:196134..198540-

>mRNA_16000 ID=mRNA_16000|Name=jgi.p|Trimin1|353056|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=567bp|location=Sequence derived from alignment at Contig_142:196134..198540- (Tribonema minus UTEX_B_3156 )
ATGGCTCTCGCCAGCATAGCGGCCGTGTGTTTGGCTGCGCTGTGCAGCGT
GGGCGCTGAATTGCTGAATCGGAAGTGGTACTACGATACAGAAGCTTTCG
CGAAGTTGGTGCGCACCTTTGATAGGCTTGATGAGGAGATCGAGAAGCGG
AAGTTTGACGCGCTGTACAAGACTGACGACAAGAGGCGAGCTCGTGAACT
GAAAGGAGTCGAGAACCTCGAAAAGGAGAAAAACCTGACGGAGACTGCGT
TGCAGGCGACAAAGTTCAAGGCGTCATTGGTGACAGCGGTGGGCATGATC
TCAGGCGTCTGGACTCTGAACCGCTTCTTCAAGGGGCTTGTGGTGTTCAC
ACTGCCATTTCGCGCACCATTCCCATTCCGGCTGCTGACTCACCGAGGGT
TAGAGGGGGACGACTACCGTCAGATTTCTGTGACGTTCATGTTCATTCTC
ACAGCCATGCTGATGAGGCGCGTGATTGACAAGAAGCTGGGCTCGCCAAT
GCCAAAGGCACTGCAGAAAAAGACATTTGCGAGCCAGTGGGCGGAACTTG
AAGCCAAGAATAGATGA
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