mRNA_15983 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|176816
Unique NamemRNA_15983
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|176816 vs. uniprot
Match: A0A835Z1W0_9STRA (Uncharacterized protein n=8 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1W0_9STRA)

HSP 1 Score: 488 bits (1256), Expect = 9.560e-173
Identity = 254/262 (96.95%), Postives = 256/262 (97.71%), Query Frame = 1 
Query:    1 MELADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLATELPDVASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATEVGRAAQDFLIGDGSVQVSRELPAELQLATPEQRTLFVASWMHKRRLALIGREKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVVHTPAHDDGALIVARPMSEDDLSVATPLAQVAHRGPEISMHSVAAEMGVRI 786
            MELADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLA ELPDVASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLV+EIEGRCRALQATEVGRAAQDFLIGDGSVQVSRELPAELQLATPEQRTLFVASWMH+RRLALI REKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVV  PAHD GALIVARPMSEDD SVATPLAQVAHRGPEISMHSVAAEMGVRI
Sbjct:    1 MELADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLALELPDVASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVNEIEGRCRALQATEVGRAAQDFLIGDGSVQVSRELPAELQLATPEQRTLFVASWMHERRLALIDREKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVVQPPAHDAGALIVARPMSEDDPSVATPLAQVAHRGPEISMHSVAAEMGVRI 262
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BLAST of jgi.p|Trimin1|176816 vs. uniprot
Match: A0A836CKR7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR7_9STRA)

HSP 1 Score: 418 bits (1075), Expect = 2.070e-146
Identity = 215/248 (86.69%), Postives = 226/248 (91.13%), Query Frame = 1 
Query:    1 MELADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLATELPDVASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATEVGRAAQDFLIGDGSVQVSRELPAELQLATPEQRTLFVASWMHKRRLALIGREKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVVHTPAHDDGALIVARPMSEDDLSVATPLAQVAHRGPE 744
            MEL DIP AIRIDLAS MGSVLDVIRLVNPE PSNQ  STFKRLATELPDVASSC QLR+N NGKLTPCADARTLV+ VWSLPGKPA AFRRTSATTVCR++GGDVSLVDEIEGRCRALQATEVGRAA+DFLIGDG VQVSRELP ELQL T EQRTL VA+WMH+RRLALI  EKTQQLALIKNGFDL+GSFGVADARDR+AFGDL RRVV  PAHDD ALIVARPMSEDD +VATPLAQVAHRGP+
Sbjct:    1 MELVDIPTAIRIDLASNMGSVLDVIRLVNPETPSNQVPSTFKRLATELPDVASSCCQLRMNRNGKLTPCADARTLVQNVWSLPGKPACAFRRTSATTVCRIVGGDVSLVDEIEGRCRALQATEVGRAARDFLIGDGGVQVSRELPPELQLGTREQRTLCVANWMHERRLALIDHEKTQQLALIKNGFDLVGSFGVADARDRMAFGDLARRVVQPPAHDDSALIVARPMSEDDPTVATPLAQVAHRGPK 248
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BLAST of jgi.p|Trimin1|176816 vs. uniprot
Match: A0A835ZAN0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN0_9STRA)

HSP 1 Score: 389 bits (999), Expect = 5.310e-125
Identity = 212/262 (80.92%), Postives = 218/262 (83.21%), Query Frame = 1 
Query:    1 MELADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLATELPDVASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATEVGRAAQDFLIGDGSVQVSRELPAELQLATPEQRTLFVASWMHKRRLALIGREKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVVHTPAHDDGALIVARPMSEDDLSVATPLAQVAHRGPEISMHSVAAEMGVRI 786
            +ELADIPAAIRI+LASGMGSVLDVIRLVNPEIPSNQASSTFKR+ATELPD+ASSC QLRINGNGKLTPCADARTLVEIV SLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATE+GRAAQDFLIGDGS QVSR+LPAELQLATPEQRT F                                  GVADARDRIAFGDLVRRVV  PAHDDGALIVARPMSEDD SVATP A VAHRGPEISM SVAAEMGVRI
Sbjct:  133 LELADIPAAIRINLASGMGSVLDVIRLVNPEIPSNQASSTFKRVATELPDMASSCCQLRINGNGKLTPCADARTLVEIVGSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATEMGRAAQDFLIGDGSDQVSRDLPAELQLATPEQRTFF----------------------------------GVADARDRIAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPSAHVAHRGPEISMQSVAAEMGVRI 360
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BLAST of jgi.p|Trimin1|176816 vs. uniprot
Match: A0A836CBT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT4_9STRA)

HSP 1 Score: 361 bits (926), Expect = 1.230e-114
Identity = 186/196 (94.90%), Postives = 189/196 (96.43%), Query Frame = 1 
Query:  199 TPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATEVGRAAQDFLIGDGSVQVSRELPAELQLATPEQRTLFVASWMHKRRLALIGREKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVVHTPAHDDGALIVARPMSEDDLSVATPLAQVAHRGPEISMHSVAAEMGVRI 786
            TPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIE  CRALQATEVGR AQDFLIGDGSV+VSRELPAELQLATPEQRTLFVASW+H+RRLALI REKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVV  PAHDDGALIVARPMSEDD SVATPLAQVAHRGPEISMHSVAAEMGVRI
Sbjct:    4 TPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEWWCRALQATEVGRTAQDFLIGDGSVKVSRELPAELQLATPEQRTLFVASWIHERRLALIDREKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPLAQVAHRGPEISMHSVAAEMGVRI 199
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BLAST of jgi.p|Trimin1|176816 vs. uniprot
Match: A0A835YN01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN01_9STRA)

HSP 1 Score: 280 bits (717), Expect = 4.060e-92
Identity = 165/262 (62.98%), Postives = 166/262 (63.36%), Query Frame = 1 
Query:    1 MELADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLATELPDVASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATEVGRAAQDFLIGDGSVQVSRELPAELQLATPEQRTLFVASWMHKRRLALIGREKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVVHTPAHDDGALIVARPMSEDDLSVATPLAQVAHRGPEISMHSVAAEMGVRI 786
            MELAD PAAIRIDLASGMGSVLDVIRLVNPEIPSNQAS TFKRLATELPDVASSCRQLRI GNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATE                                                                                           PAHDDGALIVARPMSEDD SV TPLAQVAH+GPEISMHSVAAEMGVRI
Sbjct:    1 MELADTPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASFTFKRLATELPDVASSCRQLRIYGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATE------------------------------------------------------------------------------------------PPAHDDGALIVARPMSEDDPSVPTPLAQVAHQGPEISMHSVAAEMGVRI 172
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BLAST of jgi.p|Trimin1|176816 vs. uniprot
Match: A0A835YX96_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX96_9STRA)

HSP 1 Score: 221 bits (562), Expect = 3.080e-67
Identity = 130/282 (46.10%), Postives = 174/282 (61.70%), Query Frame = 1 
Query:    1 MELADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLATELPDVASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATEVGRAAQDFLIGD--------GSVQVSRELPAELQLATPEQRTLFVASWM------------HKRRLALIGREKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVVHTPAHDDGALIVARPMSEDDLSVATPLAQVAHRGPEISMHSVAAEMGVRI 786
            M+LA++ A+IR+D A+G+GSV+DVIR+VNP      A+     L  +   +  S + +RING GK TPCA AR LVE+V+ LPGK AR FRR SATTVCRVLGGD+S+V E+E R  ALQ TE GRAAQ+FL+ D        G V   R LP EL LA+  +R+ +  +W              KR  A +  +K +    +++ ++LL + GVAD RDRI F D VRR V     D  A++ A  +  DD +V TP  +  +RG EISMH+VA+EMGV+I
Sbjct:    1 MDLANVTASIRVDRATGLGSVIDVIRMVNPNQERTAATKAVAYLTADDETLRRSIQHVRINGKGKPTPCASARVLVEVVFLLPGKAARDFRRASATTVCRVLGGDLSIVGEVEARHHALQQTEGGRAAQEFLLRDDESSATGCGQVGQVRALPVELTLASQAERSAYFQAWSKRTNEEGDLILKRKRDEAALAAKKARAQFAVES-YELLRTMGVADDRDRITFSDAVRRAVGDGGGDAEAVVEALAVGIDDPAVPTPECEPFYRGDEISMHTVASEMGVKI 281
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BLAST of jgi.p|Trimin1|176816 vs. uniprot
Match: A0A835Z3L4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L4_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.100e-65
Identity = 132/268 (49.25%), Postives = 171/268 (63.81%), Query Frame = 1 
Query:    1 MELADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLATEL-PDVASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATEVGRAAQDFLIGDGSVQVSRE----LPAELQLATPEQRTLFVASWMHKRRLALIGREKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVVHTPAHDDGALIV-ARPMSEDDLSVATPLAQVAHRGPEISMHSVAAEMGVRI 786
            M+L D+ AAIR+D A+  GSV+DVI++V     ++ AS+  KRL  ++  D+ + C QLRIN  G+LTPCADA+TLVEIVWSLPGK AR FRR SA  VCRVLGGD+S+V E+E R  ALQ TE GRAAQ FL+ D    V  E    LP EL LA   Q++ +  + M +   A+  ++   Q A+   G++LL S G AD RD I F D VRR V       GA +V AR ++ DD ++ TP     +RG EISMH+VA EM V+I
Sbjct:    1 MDLDDVTAAIRVDTATNKGSVIDVIKIVQ-SCNASDASTYCKRLLDDIGTDLGTRCVQLRINSKGRLTPCADAKTLVEIVWSLPGKAAREFRRQSAANVCRVLGGDLSIVQEVEARHHALQQTEGGRAAQKFLLEDSESSVGGEMISGLPLELALANETQKSAYFEARMRE-EAAIATKKARAQFAV--EGYELLRSMGAADHRDCITFSDAVRRAV---TDGGGAAVVEARALAADDPTIPTPQCDPFYRGEEISMHTVAHEMRVKI 261
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BLAST of jgi.p|Trimin1|176816 vs. uniprot
Match: A0A835YWG0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG0_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.680e-60
Identity = 131/276 (47.46%), Postives = 168/276 (60.87%), Query Frame = 1 
Query:    1 MELADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLATEL-PDVASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATEVGRAAQDFLIGDGSVQVSRELPAELQLATPEQRTLFVASWMHKRR------LALIGREKTQQLALIK-------NGFDLLGSFGVADARDRIAFGDLVRRVVHTPAHDDGALIVARPMSEDDLSVATPLAQVAHRGPEISMHSVAAEMGVRI 786
            M+LA++ AAIR+D A+  GSV+DVI++V     ++ AS+  KRL  ++   + + C QLRING GKLT CADA+TLVEIVWSLPGK AR FRRTSA TVCRVLGGD+S+V E+E R  ALQ+T  GRAAQDFL+GD S     E PAE       +RTL        RR      L L        +A  K       + +++L S G AD RDRI F D VRR+V       GA++ A  +  DD +V T      +RG EISMHSV+++  +RI
Sbjct:    1 MDLANVTAAIRVDTATNKGSVIDVIKIVQ-SCNASDASTYCKRLLDDVGTHIGTRCTQLRINGKGKLTFCADAKTLVEIVWSLPGKAAREFRRTSAKTVCRVLGGDLSIVREVEARHHALQSTGGGRAAQDFLLGDESS--GSEAPAE-------ERTLARTIGEVMRRNNKQAELDLSRMRDNASIATKKACAEFAVDSYEMLRSMGAADDRDRITFSDAVRRIVAEGGGAAGAIVEAGAVPADDPTVPTSDCDAYYRGEEISMHSVSSKYSLRI 266
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BLAST of jgi.p|Trimin1|176816 vs. uniprot
Match: A0A835YYW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW8_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.160e-55
Identity = 99/150 (66.00%), Postives = 114/150 (76.00%), Query Frame = 1 
Query:    1 MELADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLATELPDVASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATEVGRAAQDFLIGDGSVQVSRELPAELQL 450
            M++AD   +IR+D AS  GSV+DVIRLV P +PSNQAS+TF RLA+E+PDVASSC  LRING GK TPCADA+TLVEIVWSLPGK AR FRR SA TVCR+LGGD+SLV EIE R  ALQ TE G A Q FL+ D     S+E   +L L
Sbjct:    1 MDVADFTTSIRVDSASNKGSVIDVIRLVIPNLPSNQASTTFARLASEMPDVASSCCHLRINGKGKPTPCADAKTLVEIVWSLPGKAARDFRRESANTVCRLLGGDLSLVQEIESRHHALQKTEGGHAVQGFLMSDTLSAASQESDTQLAL 150
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BLAST of jgi.p|Trimin1|176816 vs. uniprot
Match: A0A836CN02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN02_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.480e-52
Identity = 92/99 (92.93%), Postives = 93/99 (93.94%), Query Frame = 1 
Query:  490 MHKRRLALIGREKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVVHTPAHDDGALIVARPMSEDDLSVATPLAQVAHRGPEISMHSVAAEMGVRI 786
            MH+RRLALI REKTQQLALI NGFDLLGSFGVADARDRIAFGDLVRRVV  PAHDDGALIVARPM EDD SVATPLAQVAHRGPEISMHSVAAEMGVRI
Sbjct:    1 MHERRLALIDREKTQQLALINNGFDLLGSFGVADARDRIAFGDLVRRVVQPPAHDDGALIVARPMCEDDPSVATPLAQVAHRGPEISMHSVAAEMGVRI 99
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176816 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1W0_9STRA9.560e-17396.95Uncharacterized protein n=8 Tax=Tribonema minus Ta... [more]
A0A836CKR7_9STRA2.070e-14686.69Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZAN0_9STRA5.310e-12580.92Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CBT4_9STRA1.230e-11494.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YN01_9STRA4.060e-9262.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YX96_9STRA3.080e-6746.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z3L4_9STRA1.100e-6549.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YWG0_9STRA1.680e-6047.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYW8_9STRA1.160e-5566.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CN02_9STRA1.480e-5292.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_142contigContig_142:47066..47854 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|176816|e_gw1.142.26.1
Max annot lvl2880.D8LP49|-
EggNOG OGs2EUDG@1|root,2SWJG@2759|Eukaryota
Evalue1.88e-37
Seed ortholog2880.D8LP49
Hectar predicted targeting categoryother localisation
TranscriptId177138
TrackFilteredModels1
ProteinId176816
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176816gene_15983Tribonema minus UTEX_B_3156 geneContig_142 47066..47854 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15983_1exon_15983_1Tribonema minus UTEX_B_3156 exonContig_142 47066..47854 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15983CDS_15983Tribonema minus UTEX_B_3156 CDSContig_142 47066..47854 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176816Trimin1|176816|e_gw1.142.26.1Tribonema minus UTEX_B_3156 polypeptideContig_142 47066..47854 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15983 ID=mRNA_15983|Name=jgi.p|Trimin1|176816|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=789bp|location=Sequence derived from alignment at Contig_142:47066..47854+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAACTGGCTGATATCCCCGCCGCCATTCGCATCGATCTCGCTTCGGG
GATGGGCAGCGTGCTTGATGTCATACGCCTCGTGAATCCTGAGATACCCT
CAAACCAGGCGTCTTCCACCTTCAAGAGGCTGGCAACAGAGTTGCCAGAC
GTGGCGTCGTCCTGCCGCCAACTCCGAATCAACGGCAATGGCAAACTCAC
TCCGTGCGCTGATGCACGAACGCTGGTGGAAATTGTTTGGTCGCTGCCTG
GCAAGCCAGCACGTGCATTTCGGCGTACTTCGGCGACGACTGTGTGCCGC
GTTCTTGGCGGGGATGTCAGCTTGGTCGATGAGATTGAGGGGCGGTGCCG
TGCGCTGCAGGCGACAGAAGTGGGTCGCGCAGCGCAAGACTTCCTGATCG
GTGACGGAAGCGTCCAAGTGTCGAGGGAGCTGCCTGCGGAGCTACAGTTG
GCCACTCCCGAGCAGCGGACCTTGTTTGTTGCGAGTTGGATGCATAAGCG
CAGACTGGCGCTGATTGGCCGTGAGAAGACTCAGCAGCTGGCTTTGATCA
AGAATGGTTTTGACCTCCTCGGCAGTTTTGGTGTTGCTGACGCGCGTGAC
AGGATCGCCTTCGGAGACCTGGTGCGCCGTGTTGTACACACCCCTGCACA
TGATGACGGCGCACTCATTGTCGCACGGCCGATGAGCGAGGATGACCTGA
GCGTGGCGACGCCCTTGGCGCAGGTTGCGCACCGAGGCCCCGAAATAAGC
ATGCACTCGGTCGCAGCCGAGATGGGTGTCCGCATCTAG
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protein sequence of jgi.p|Trimin1|176816

>Trimin1|176816|e_gw1.142.26.1 ID=Trimin1|176816|e_gw1.142.26.1|Name=jgi.p|Trimin1|176816|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=263bp
MELADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLATELPD
VASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCR
VLGGDVSLVDEIEGRCRALQATEVGRAAQDFLIGDGSVQVSRELPAELQL
ATPEQRTLFVASWMHKRRLALIGREKTQQLALIKNGFDLLGSFGVADARD
RIAFGDLVRRVVHTPAHDDGALIVARPMSEDDLSVATPLAQVAHRGPEIS
MHSVAAEMGVRI*
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mRNA from alignment at Contig_142:47066..47854+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15983 ID=mRNA_15983|Name=jgi.p|Trimin1|176816|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=789bp|location=Sequence derived from alignment at Contig_142:47066..47854+ (Tribonema minus UTEX_B_3156 )
ATGGAACTGGCTGATATCCCCGCCGCCATTCGCATCGATCTCGCTTCGGG
GATGGGCAGCGTGCTTGATGTCATACGCCTCGTGAATCCTGAGATACCCT
CAAACCAGGCGTCTTCCACCTTCAAGAGGCTGGCAACAGAGTTGCCAGAC
GTGGCGTCGTCCTGCCGCCAACTCCGAATCAACGGCAATGGCAAACTCAC
TCCGTGCGCTGATGCACGAACGCTGGTGGAAATTGTTTGGTCGCTGCCTG
GCAAGCCAGCACGTGCATTTCGGCGTACTTCGGCGACGACTGTGTGCCGC
GTTCTTGGCGGGGATGTCAGCTTGGTCGATGAGATTGAGGGGCGGTGCCG
TGCGCTGCAGGCGACAGAAGTGGGTCGCGCAGCGCAAGACTTCCTGATCG
GTGACGGAAGCGTCCAAGTGTCGAGGGAGCTGCCTGCGGAGCTACAGTTG
GCCACTCCCGAGCAGCGGACCTTGTTTGTTGCGAGTTGGATGCATAAGCG
CAGACTGGCGCTGATTGGCCGTGAGAAGACTCAGCAGCTGGCTTTGATCA
AGAATGGTTTTGACCTCCTCGGCAGTTTTGGTGTTGCTGACGCGCGTGAC
AGGATCGCCTTCGGAGACCTGGTGCGCCGTGTTGTACACACCCCTGCACA
TGATGACGGCGCACTCATTGTCGCACGGCCGATGAGCGAGGATGACCTGA
GCGTGGCGACGCCCTTGGCGCAGGTTGCGCACCGAGGCCCCGAAATAAGC
ATGCACTCGGTCGCAGCCGAGATGGGTGTCCGCATCTAG
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Coding sequence (CDS) from alignment at Contig_142:47066..47854+

>mRNA_15983 ID=mRNA_15983|Name=jgi.p|Trimin1|176816|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=789bp|location=Sequence derived from alignment at Contig_142:47066..47854+ (Tribonema minus UTEX_B_3156 )
ATGGAACTGGCTGATATCCCCGCCGCCATTCGCATCGATCTCGCTTCGGG
GATGGGCAGCGTGCTTGATGTCATACGCCTCGTGAATCCTGAGATACCCT
CAAACCAGGCGTCTTCCACCTTCAAGAGGCTGGCAACAGAGTTGCCAGAC
GTGGCGTCGTCCTGCCGCCAACTCCGAATCAACGGCAATGGCAAACTCAC
TCCGTGCGCTGATGCACGAACGCTGGTGGAAATTGTTTGGTCGCTGCCTG
GCAAGCCAGCACGTGCATTTCGGCGTACTTCGGCGACGACTGTGTGCCGC
GTTCTTGGCGGGGATGTCAGCTTGGTCGATGAGATTGAGGGGCGGTGCCG
TGCGCTGCAGGCGACAGAAGTGGGTCGCGCAGCGCAAGACTTCCTGATCG
GTGACGGAAGCGTCCAAGTGTCGAGGGAGCTGCCTGCGGAGCTACAGTTG
GCCACTCCCGAGCAGCGGACCTTGTTTGTTGCGAGTTGGATGCATAAGCG
CAGACTGGCGCTGATTGGCCGTGAGAAGACTCAGCAGCTGGCTTTGATCA
AGAATGGTTTTGACCTCCTCGGCAGTTTTGGTGTTGCTGACGCGCGTGAC
AGGATCGCCTTCGGAGACCTGGTGCGCCGTGTTGTACACACCCCTGCACA
TGATGACGGCGCACTCATTGTCGCACGGCCGATGAGCGAGGATGACCTGA
GCGTGGCGACGCCCTTGGCGCAGGTTGCGCACCGAGGCCCCGAAATAAGC
ATGCACTCGGTCGCAGCCGAGATGGGTGTCCGCATCTAG
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