mRNA_1061 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|156801 vs. uniprot
Match: A0A835ZL56_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL56_9STRA) HSP 1 Score: 459 bits (1181), Expect = 1.650e-163 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1
Query: 1 MLVRFIEGAFWNLEHKGVPVSALIEETVAWRESVGAHAITPASLGARARGRDIVGPLAPALRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHLPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVFAREGDRALVARYVAPAELPRALGGASAYEYDAARYFAEAHA 681
MLVRFIEGAFWNLEHKGVPVSALIEETVAWRESVGAHAITPASLGARARGRDIVGPLAPALRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHLPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVFAREGDRALVARYVAPAELPRALGGASAYEYDAARYFAEAHA
Sbjct: 1 MLVRFIEGAFWNLEHKGVPVSALIEETVAWRESVGAHAITPASLGARARGRDIVGPLAPALRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHLPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVFAREGDRALVARYVAPAELPRALGGASAYEYDAARYFAEAHA 227
BLAST of jgi.p|Trimin1|156801 vs. uniprot
Match: D8LQH2_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQH2_ECTSI) HSP 1 Score: 164 bits (416), Expect = 3.620e-45 Identity = 94/222 (42.34%), Postives = 123/222 (55.41%), Query Frame = 1
Query: 10 RFIEGAFWNLEHKGVPVSALIEETVAWRESVGAHAITPASLGARARGRDIVGPLAPALRAGAIVVHGRDRDGRPIMHVRL---GALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHLPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVFAREGDRALVARYVAPAELPRALGGASAYEYDAARYF 666
RF+E AFW LEH G VS IEE++AWRE +GA R R D+V GAI+V G D RP+++ R G + G G S + +Y +ERA R R YTIV DC G GL LPP+ +++ MF +LS HYPMRLGH+L N SV LCW+V SP++ RTK K+ A+Y+ P++L GG S ++YD A YF
Sbjct: 207 RFLEAAFWALEHDGKRVSDFIEESIAWREKIGAD---------RLRKEDVVDQGC----RGAIIVKGHDLSRRPVVYFRPALDGRMEGDGNS-----KLMIYNLERAIRLMPRNSWQYTIVIDCEGMGLKQLPPVTYMKKMFKLLSHHYPMRLGHVLFTNVGPSVMLCWKVVSPLLQARTKAKMHLIPSTALGQTAKYIHPSQLLSFAGGKSTWQYDPAVYF 410
BLAST of jgi.p|Trimin1|156801 vs. uniprot
Match: D7FQ39_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ39_ECTSI) HSP 1 Score: 135 bits (339), Expect = 6.820e-36 Identity = 74/222 (33.33%), Postives = 116/222 (52.25%), Query Frame = 1
Query: 4 LVRFIEGAFWNLEHKGVPVSALIEETVAWRESVGAHAITPASLGARARGRDIVGPLAPALRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHLPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVF-AREGDRALVARYVAPAELPRAL-GGASAYEYDAARY 663
++R++E A+W +E G P+ + TV WRE H +T +A + G + V G DR RPI+H R G K + E+ L +T+ERA + +G + +VADC GFG + PPLP L+ F + RHYPMRLG++++ NA + W++ S ++ RTK+KI F +++ A + + P+ LP +L GG + Y Y
Sbjct: 1 MMRYLEMAYWTMESMGQPLPDAVASTVRWREDATPHLLTD-------------NQVAEEAKYGKMYVRGLDRQQRPIIHYRPG--LEKSFDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKEKIAFLSKKEAEATLTGLIDPSALPASLPGGLDDFTYSNEEY 207
BLAST of jgi.p|Trimin1|156801 vs. uniprot
Match: A0A6H5JFY3_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY3_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 4.470e-20 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 1
Query: 289 LRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHLPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVF-AREGDRALVARYVAPAELPRAL-GGASAYEYDAARY 663
L +T+ERA + +G + +VADC GFG + PPLP L+ F + RHYPMRLG++++ NA + W++ S ++ RTK+KI F +++ A + + P+ LP +L GG + Y Y
Sbjct: 20 LNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKEKIAFLSKKEAEATLTGLIDPSALPASLPGGLDDFTYSNKEY 146
BLAST of jgi.p|Trimin1|156801 vs. uniprot
Match: A0A0D9P0K8_METAN (CRAL-TRIO domain-containing protein n=9 Tax=Opisthokonta TaxID=33154 RepID=A0A0D9P0K8_METAN) HSP 1 Score: 79.3 bits (194), Expect = 1.700e-13 Identity = 67/234 (28.63%), Postives = 107/234 (45.73%), Query Frame = 1
Query: 1 MLVRFIEGAFWNLEHKGVPVSALIEETVAWR-------ESVGAHAITPASLG-------ARARGRDIVGPLAPALRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTH--LPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPR--TKDKIVFAREGDRALVARYVAPAELPRALGGASAYEY 648
+ +RF+ W++ + + ++ +T+ WR E + H A+ RA G D + R G +HG DR GRPI H+R+ S + RY +Y +E A + +EA TI+ D GF L + L PL F+ F + +YP LG +L+ NA + WR+ + +K K + ++G R R++AP +L R LGG +EY
Sbjct: 146 LALRFLRACNWDI----IKATTMMGKTIYWRTIEAGVDEDILRHGEGGAAEDEKNNRGITRALGADFM----KQARWGKSFIHGVDRAGRPITHIRVRLHRSSDQSVQSLERYTLYLLELARLSLRHPIEAGTILLDLSGFKLANFDLKPLLFI---FKQVETNYPGSLGLVLVHNAPVGLKTIWRLARVWLNKELTSKVKFTYGKKGLR----RWIAPDQLIRELGGEEDWEY 364
BLAST of jgi.p|Trimin1|156801 vs. uniprot
Match: A0A151GVJ0_9HYPO (Putative phosphatidylinositol transfer protein csr1 protein n=1 Tax=Drechmeria coniospora TaxID=98403 RepID=A0A151GVJ0_9HYPO) HSP 1 Score: 76.3 bits (186), Expect = 1.840e-12 Identity = 54/160 (33.75%), Postives = 78/160 (48.75%), Query Frame = 1
Query: 181 LRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHLP--PLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKI--VFAREGDRALVARYVAPAELPRALGGASAYEY 648
LR G ++HGRDR GRPI +R+ G S E RY V+ +E VE TIV D FGL ++ P+ F+ F +YP LG+IL+ NA + W+V + P K+ R+G + ++AP +L + LGG +EY
Sbjct: 187 LRMGKSLLHGRDRQGRPISVIRVHLHHWGGQSPESIERYTVHLIETTRLVLESPVETGTIVFDMTHFGLANMDYGPVKFIIRCF---EANYPESLGNILIHNAPWIFNPIWKVIRAWLDPVVAAKVHLTHGRKG----IEEFIAPEQLIKELGGDEDFEY 339
BLAST of jgi.p|Trimin1|156801 vs. uniprot
Match: A0A1Y1HKD2_KLENI (CRAL-TRIO domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HKD2_KLENI) HSP 1 Score: 73.9 bits (180), Expect = 5.870e-12 Identity = 58/211 (27.49%), Postives = 93/211 (44.08%), Query Frame = 1
Query: 4 LVRFIEGAFWNLEHKGVPVSALIEETVAWRESVGAHAITPASLGARARGRDIVGPLAPALRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHLPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVFAREGDRA--LVARYVAPAELPRALGG 630
LVRF++ WN++ S L + WR+ H R DI LA A + + G D+ GRP+ + + E+ R VY ++A GVE + + D G G ++ LR +F L YP RLG +++ NA ++ + W+V SP + +T+DK+VF +V +Y ++P GG
Sbjct: 75 LVRFLKARDWNVKK----ASKLFMNHLNWRQEFVPHGYI--------RDEDIPNELA----AEKLYLQGFDKLGRPLSLTMVRKHDAAKRNLEEFQRLLVYGSDKAIARMPPGVEQFVGLLDLTGIGYKNMDT-GALRFLFDFLQGFYPERLGFLIMLNAPSAFGMVWKVVSPFIHQKTRDKLVFCNHKTLVDKVVPKYFELDQVPVEYGG 268
BLAST of jgi.p|Trimin1|156801 vs. uniprot
Match: A0A135L9B7_PENPA (CRAL-TRIO domain-containing protein n=1 Tax=Penicillium patulum TaxID=5078 RepID=A0A135L9B7_PENPA) HSP 1 Score: 73.6 bits (179), Expect = 1.640e-11 Identity = 49/158 (31.01%), Postives = 76/158 (48.10%), Query Frame = 1
Query: 181 LRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHL--PPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVFAREGDRALVARYVAPAELPRALGGASAYEY 648
LR G +HG DR+GRP++++R+ S E RY ++ +E A VE TIV D GFGL+++ PP+ F+ F +YP LG +L+ NA WR+ + P K+ F R A + +Y+ +P+ G + Y
Sbjct: 256 LRTGKSFIHGFDREGRPVIYIRVKIHKPDAQSEEVLERYIIHMIEAARLIVGPPVETGTIVFDMTGFGLSNMDYPPVKFISKCF---EANYPESLGQLLIHNAPWIFSGIWRLIQGWLDPVVASKVHFTRSV--ADLDKYIPRNTIPKEFAGEGDWSY 408
BLAST of jgi.p|Trimin1|156801 vs. uniprot
Match: A0A1V6RZC5_9EURO (CRAL-TRIO domain-containing protein n=1 Tax=Penicillium vulpinum TaxID=29845 RepID=A0A1V6RZC5_9EURO) HSP 1 Score: 73.2 bits (178), Expect = 2.380e-11 Identity = 54/162 (33.33%), Postives = 84/162 (51.85%), Query Frame = 1
Query: 181 LRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCL-RYAVYTVERAWRARARGVEAYTIVADCRGFGLTHL--PPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVFAREGDRALVARYVAPAELPRALGGAS--AYEYD 651
LR G +HG DRDGRP+++VR+ + G +E+ L RY V+ +E A VE TIV D GFGL+++ PP+ F+ F +YP LG +L+ NA W++ + P K+ F R A + +++ ++P+ L G Y+YD
Sbjct: 257 LRMGKGFIHGFDRDGRPVVYVRV-KIHKPGAQSEEALERYIVHMIESVRLVVAPPVETGTIVFDLTGFGLSNMEYPPVKFILKCF---EANYPESLGQMLVHNAPWVFSGIWKLIHGWMDPVVASKVHFTRS--IADLDKFIPRNKIPKELSGDEDWTYKYD 412
BLAST of jgi.p|Trimin1|156801 vs. uniprot
Match: A0A5C6G4P4_9HYPO (CRAL-TRIO domain-containing protein n=2 Tax=Metarhizium rileyi TaxID=1649241 RepID=A0A5C6G4P4_9HYPO) HSP 1 Score: 72.8 bits (177), Expect = 2.960e-11 Identity = 61/230 (26.52%), Postives = 101/230 (43.91%), Query Frame = 1
Query: 1 MLVRFIEGAFWNLEHKGVPVSALIEETVAWRE---SVGAHAITPASLGA-------RARGRDIVGPLAPALRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTH--LPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPP--RTKDKIVFAREGDRALVARYVAPAELPRALGGASAYEY 648
+ +RF+ W++ + + ++ +T+ WR V + GA R R + R G +HG DR GRPI H+R+ S + RY +Y +E A + +E TI+ D GF + L PL F+ +YP LG IL+ NA + WR+ R+K K + ++G ++R++AP ++ + LGG +EY
Sbjct: 146 LALRFLRTCNWDV----IKATTMMGKTIYWRTIEAGVDDDILKHGDGGAAEDEKNNRGIARSLGADFMKQARWGKSFIHGVDRAGRPITHIRVRLHRSSDQSVQSLERYTLYLLELARLSLRHPIETGTILLDLSGFKFANFDLSPLKFI---LKQTETNYPGSLGLILIHNAPVGLKTIWRLFRVWFDKELRSKVKFTYGKKG----LSRWIAPNQMIKELGGDDDWEY 364 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156801 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1061 ID=mRNA_1061|Name=jgi.p|Trimin1|156801|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=684bp|location=Sequence derived from alignment at Contig_1:919954..921359+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGGTGCGCTTCATCGAGGGCGCGTTCTGGAATCTGGAGCACAAGGGback to top protein sequence of jgi.p|Trimin1|156801 >Trimin1|156801|e_gw1.1.296.1 ID=Trimin1|156801|e_gw1.1.296.1|Name=jgi.p|Trimin1|156801|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=228bp MLVRFIEGAFWNLEHKGVPVSALIEETVAWRESVGAHAITPASLGARARGback to top mRNA from alignment at Contig_1:919954..921359+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1061 ID=mRNA_1061|Name=jgi.p|Trimin1|156801|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1406bp|location=Sequence derived from alignment at Contig_1:919954..921359+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_1:919954..921359+ >mRNA_1061 ID=mRNA_1061|Name=jgi.p|Trimin1|156801|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=684bp|location=Sequence derived from alignment at Contig_1:919954..921359+ (Tribonema minus UTEX_B_3156 )back to top |