mRNA_13402 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|176775
Unique NamemRNA_13402
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|176775 vs. uniprot
Match: A0A835ZBV5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV5_9STRA)

HSP 1 Score: 655 bits (1690), Expect = 2.550e-238
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 1
Query:    1 RYEPSEWEQEWSNHVSEWSDPGTGKRLCAKMKEREEYVAAWDKGVAQAQADGCGALDTRLRDQAVFSRYVYKNTCTEEEASTVIEPLAGLTRHPRANCFDRQHLVDRGYLLLGRTSDRCRTRMAEPAALSMVRAVEDQRVLLFDMGASLYSDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIEQLQRDPELRLLIDEMFFEHHVNVEAMYKSWKTQGETQRLSDTYKMIGGFRRQGLRFHSWP 930
            RYEPSEWEQEWSNHVSEWSDPGTGKRLCAKMKEREEYVAAWDKGVAQAQADGCGALDTRLRDQAVFSRYVYKNTCTEEEASTVIEPLAGLTRHPRANCFDRQHLVDRGYLLLGRTSDRCRTRMAEPAALSMVRAVEDQRVLLFDMGASLYSDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIEQLQRDPELRLLIDEMFFEHHVNVEAMYKSWKTQGETQRLSDTYKMIGGFRRQGLRFHSWP
Sbjct:    1 RYEPSEWEQEWSNHVSEWSDPGTGKRLCAKMKEREEYVAAWDKGVAQAQADGCGALDTRLRDQAVFSRYVYKNTCTEEEASTVIEPLAGLTRHPRANCFDRQHLVDRGYLLLGRTSDRCRTRMAEPAALSMVRAVEDQRVLLFDMGASLYSDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIEQLQRDPELRLLIDEMFFEHHVNVEAMYKSWKTQGETQRLSDTYKMIGGFRRQGLRFHSWP 310          
BLAST of jgi.p|Trimin1|176775 vs. uniprot
Match: A0A835YJK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJK4_9STRA)

HSP 1 Score: 481 bits (1238), Expect = 3.090e-169
Identity = 225/311 (72.35%), Postives = 259/311 (83.28%), Query Frame = 1
Query:    1 RYEPSEWEQEWSNHVSEWSDPGTGKRLCAKMKEREEYVAAWDKGVAQAQADGCGALDTRLRDQAVFSRYVYKNTCTEEEASTVIEPLAGLTRHPRANCFDRQH-LVDRGYLLLGRTSDRCRTRMAEPAALSMVRAVEDQRVLLFDMGASLYSDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIEQLQRDPELRLLIDEMFFEHHVNVEAMYKSWKTQGETQRLSDTYKMIGGFRRQGLRFHSWP 930
            RYEPS WEQEW  HVSEWSDPGTG  LC +M+E    VAAWD+GVA +Q  GCGALD+RLRD AVFSR+VY+NTCT+EEAS  IEPLAGLTRHPRA CF  +  L+DRGYL+LGRTS +C TR+AEPAALSM  AV DQRVLLFD+GAS Y+ G GG+SQQWFVDTLK HGV +LEYWGWEA   D ++VW + +P DLKP+YHWIN+PA+PDP S DNPWNFI++VA+  DHVFVKLDIDNSPIE  F++QLQ DPEL+LLIDEMFFEHHVNVE MY+ W TQ E QRLSDTY M+GG RR+G+RFHSWP
Sbjct:   16 RYEPSAWEQEWIEHVSEWSDPGTGGALCDRMREAHARVAAWDEGVATSQKSGCGALDSRLRDDAVFSRFVYRNTCTDEEASMAIEPLAGLTRHPRALCFPGEDKLIDRGYLVLGRTSPKCATRVAEPAALSM--AVPDQRVLLFDLGASKYTSGGGGASQQWFVDTLKLHGVTKLEYWGWEAHGEDPIKVWAE-LPGDLKPYYHWINIPAHPDPDSSDNPWNFIRSVAKPTDHVFVKLDIDNSPIEFQFMQQLQADPELQLLIDEMFFEHHVNVELMYRYWHTQREAQRLSDTYAMVGGLRRKGMRFHSWP 323          
BLAST of jgi.p|Trimin1|176775 vs. uniprot
Match: A0A835YZ26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ26_9STRA)

HSP 1 Score: 457 bits (1177), Expect = 3.230e-160
Identity = 212/310 (68.39%), Postives = 246/310 (79.35%), Query Frame = 1
Query:    1 RYEPSEWEQEWSNHVSEWSDPGTGKRLCAKMKEREEYVAAWDKGVAQAQADGCGALDTRLRDQAVFSRYVYKNTCTEEEASTVIEPLAGLTRHPRANCFDRQHLVDRGYLLLGRTSDRCRTRMAEPAALSMVRAVEDQRVLLFDMGASLYSDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIEQLQRDPELRLLIDEMFFEHHVNVEAMYKSWKTQGETQRLSDTYKMIGGFRRQGLRFHSWP 930
            RYEPS+WEQEW  H++EWSDPGTG  LC KM+E+E +V AWD+G   +Q DGCGALD+RLRD +VFSR+VY++TCT +EAS  IEPLAGLTRHPRA C+    L DRGYL+LGRTS  C+T MAEPAALSM       RVLLFDMGASL+S G GG+SQQWFVDTLK HGV RLEYWGWEA   D   VW + +P DLKPFYHW+N+PA PD  S DNPWNFIKA A+  DHVFVKLDIDNSPIEL F++QLQ DPEL++LIDEMFFEHHVNVE M + W T  E  +L DTY+++GG RR G+RFHSWP
Sbjct:    5 RYEPSKWEQEWMGHITEWSDPGTGDMLCLKMREQEVHVRAWDEGALMSQRDGCGALDSRLRDTSVFSRFVYRDTCTGKEASMAIEPLAGLTRHPRAVCYTTDVLTDRGYLVLGRTSPMCKTHMAEPAALSM-------RVLLFDMGASLFSSGYGGASQQWFVDTLKLHGVSRLEYWGWEAHTEDPTAVWAE-IPGDLKPFYHWMNIPAIPDHLSSDNPWNFIKATAKRTDHVFVKLDIDNSPIELEFMQQLQADPELQVLIDEMFFEHHVNVEPMNQYWNTHNEPMKLRDTYEIVGGLRRSGMRFHSWP 306          
BLAST of jgi.p|Trimin1|176775 vs. uniprot
Match: A0A836CAP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP5_9STRA)

HSP 1 Score: 321 bits (823), Expect = 4.340e-106
Identity = 160/316 (50.63%), Postives = 212/316 (67.09%), Query Frame = 1
Query:    1 RYEPSEWEQEWSNHVSEWSDPGTGKRLCAKMKEREEYVAAWDKGVAQAQADGCGALDTRLRDQA-VFSRYVYKNTCTEEEASTVIEPLAGLTRHPRANCFDR----QHLVDRGYLLLGRTSDRCRTRMAEP-AALSMVRAVEDQRVLLFDMGASLYSDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIEQLQRDPELRLLIDEMFFEHHVNVEAMYKSWKTQGETQRLSDTYKMIGGFRRQGLRFHSWP 930
            RYEPS WE  W  HVSEWS       LC +M    + V  W+ G   +Q  GCG LD  L     VFSR+VY++TCT +   T IEPLAGLTRHPRA C DR       ++RGY++LG+++D C    A   +AL  V +   +R+L+FD+GASLYS G GG+SQ+WFV++  +HG+   EY+ WEA  LD+ +VW Q +P+ LKP YHW NVPA+P P+S +NPW+ ++AVA  ED+V VKLDIDN+ +E  F+ +++ D  LR L+DEMFFEHHVNV  M++ W TQGE   L+DTY M+   R +G+RFHSWP
Sbjct:   18 RYEPSRWEDTWREHVSEWSSDEL--ELCRRMVNDIDKVRLWETGAEHSQK-GCGLLDPALSHSPHVFSRFVYEDTCTGQTVETYIEPLAGLTRHPRALCMDRFPRRSKNINRGYIVLGQSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQ-IPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHVNVPIMWRYWGTQGERVYLNDTYAMVQELRSEGIRFHSWP 329          
BLAST of jgi.p|Trimin1|176775 vs. uniprot
Match: A0A835Z898_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z898_9STRA)

HSP 1 Score: 308 bits (790), Expect = 7.920e-102
Identity = 150/283 (53.00%), Postives = 198/283 (69.96%), Query Frame = 1
Query:   91 MKEREEYVAAWDKGVAQAQADGCGALDTRL-RDQAVFSRYVYKNTCTEEEASTVIEPLAGLTRHPRANCFDRQ--HLVDRGYLLLGRTSDRCRTRMAEPAALSMVRAVEDQRVLLFDMGASLYSDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIEQLQRDPELRLLIDEMFFEHHVNVEAMYKSWKTQGETQRLSDTYKMIGGFRRQGLRFHSWP 930
            M+   + V AW  G A++QA+GCG LD  L R+Q VFSR+++++ CT E  +T IEPLAGLTRHP A C D+    L DRGY++LG+TS+ C   +   AA     A    R+L+FD+GAS Y+   G  SQ+WFV++  +HG    EY+ WEA   D V +W + VP DLKP YHW+N+PA PD +S DNPWNF++A+A  +D V VKLDIDN+P+E AF+EQL +DP+L+ L+DEMFFEHHVNVE M++ WKTQ E   L DTY MI   R++G+RFHSWP
Sbjct:    1 MQSDVKLVKAWSGGAAKSQANGCGHLDASLAREQGVFSRFIFEDQCTGETFTTYIEPLAGLTRHPEALCLDKNADKLGDRGYIVLGQTSETCAHALPSRAAFRAPFA----RMLVFDLGASTYTTPVGADSQRWFVESYARHGFAVSEYYAWEAGKHDPVAIWAE-VPGDLKPHYHWLNIPATPDAESMDNPWNFLRAIATPDDFVAVKLDIDNTPVETAFMEQLFKDPKLQALVDEMFFEHHVNVENMWRYWKTQKEKVYLKDTYSMILQLRQKGIRFHSWP 278          
BLAST of jgi.p|Trimin1|176775 vs. uniprot
Match: A0A7S4CA73_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CA73_9EUGL)

HSP 1 Score: 174 bits (441), Expect = 9.020e-48
Identity = 100/295 (33.90%), Postives = 151/295 (51.19%), Query Frame = 1
Query:    4 YEPSEWEQEW-SNHVSEWSDPGTGK--RLCAKMKEREEYVAAWDKGVAQAQADGCGALDTRLRDQAVFSRYVYKNTCTEEEASTVIEPLAGLTRHPRANCFDRQHLVDRGYLLLGRTSDRCRTRMAEPAALSMVRAVEDQRVLLFDMGASLYSDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIEQLQRDPELRLLIDEMFFEHHV-NVEAMYKSWKTQGETQRLSDT 876
            YEPS WE +W  N  +   DP        C  ++     +  W +G+AQ++ +G   L+ +     ++SR+ Y++ CT+E +   IEPL    RHP+A C+    +  + +L+L   S                  ++  R   FD+GAS+Y+ G GG+S QWFV+  + +GV       WEA      + W   VP D+KP   + N+P    P S DNP  +I  + R ED V +K+DID+SP E A +EQ+    EL LLIDE+F+EHHV N   +   W    + QR++ T
Sbjct:  124 YEPSAWEADWVKNAGARMWDPRNPHWTNACTNVRANVGTIDQWIRGIAQSRREG-KPLEAK---PGIYSRFTYEDACTKEVSHVAIEPLVAALRHPKAWCYGTDPIFLKDWLVLPYKSQ-----------------LDPGRTFYFDLGASVYNQGLGGASMQWFVEEYRHNGVDFDRILAWEATPTAASKFWNA-VPADVKPHMQYFNIPVTSTPGSADNPLGYITKLTRPEDFVMLKIDIDHSPTEQALVEQILASKELCLLIDEIFWEHHVLNSPMVQNGWDGDLKAQRVTQT 396          
BLAST of jgi.p|Trimin1|176775 vs. uniprot
Match: A0A7S1QAX9_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1QAX9_NEODS)

HSP 1 Score: 150 bits (378), Expect = 2.180e-38
Identity = 102/340 (30.00%), Postives = 157/340 (46.18%), Query Frame = 1
Query:    1 RYEPSEWEQEWSNHVSEWSDPGTGKRLCAKMK-----EREEYVAAWDKGVAQAQADGCG----ALDTRLRDQA-----VFSRYVYKNTCTEEEAS----------------TVIEPLAGLTRHPRANCFDRQHLVDRGYLLLGRTSDRCRTRMAEPAALSMVRAVEDQRVLLFDMGASLYSDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIEQLQRDPELRLLIDEMFFEHHVNVEAMYKSWKT-QGETQRLSDTYKMIGGFRRQGLRFHSW 927
            +Y PS +E +W   V  + D     R+C  ++     E + Y+A  D+          G       TR + QA      FS++ Y   C   E                  + IEPLAGL RHP+A C    H+ ++ YL++   +        +P  LS  +     R   FD+GAS++S+G G SSQ WF  T ++  +    +  WE +     +V+   +P  L+P YHW NVPA     S  NP   I + A  +D V +K+DID   +E+  ++Q+  D  +  L+DE FFEHHVN+E M   W   + +  +   + ++    R  G+R HSW
Sbjct:  100 KYHPSAFETKWRKGVLRYQD-----RICDALRTDFATENKLYMAHMDRCALDRVVGESGFPRNCSRTRHQPQAPFPDEAFSKFEYALVCAAVERPEALANVTFTDDMPRRYSYIEPLAGLLRHPKA-CDGESHIFNKNYLVVDAWAAHRNDAFVKPG-LSTSKRAGQVRSFYFDVGASVWSEGLGSSSQDWFYSTYRQRCIDFDRFHMWEVKPWKPSKVFGD-IPGHLQPRYHWYNVPAGIKRGSSRNPLTHIVSEATEDDFVMLKIDIDTPVVEVPLVKQIIEDRSVSGLVDEFFFEHHVNMEVMRGPWSIDRNDPVKQLASLEIFSKLRELGIRAHSW 431          
BLAST of jgi.p|Trimin1|176775 vs. uniprot
Match: A0A2V0P754_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P754_9CHLO)

HSP 1 Score: 145 bits (366), Expect = 6.360e-37
Identity = 102/325 (31.38%), Postives = 151/325 (46.46%), Query Frame = 1
Query:    4 YEPSEWEQEWSNHVSEWSDPGTGKRLC--AKMKEREEYVAAWDKGVAQAQ---ADGCGALDTRLRDQAVFSRYVYKNTC---TEEEASTVIEPLAGLTRHPRANCFDRQHLVDRGYL--LLGRTSDRCRTRMAEPAALSMVRAVEDQ------RVLLFDMGASLYSDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIEQLQRDPELRLLIDEMFFEHHVNVEAMYKSWK-TQGETQRLSDTYKMIGGFRRQGLRFHSW 927
            YE SE+E  W  + + WS     K  C  A   E+ E +  W  G+A A    A+    LD      +VFS++V    C   T  E +  IEPLA   RHP   C   +      Y   ++    +R    +A    +  VR           +V  FD+GA+ Y        Q WFV +    G+     + WEA A+   E++ + VP +L   Y + N+PA  D K   +  N +K++A+  D V  KLDID + +E+  ++ L  DPE   L+DE FFEHHVN   M   W  T  E   L+++ ++    R++G+R HSW
Sbjct:   84 YESSEYESTWLKNAAAWS-----KDFCKHADTPEQNELMEKWLNGIASANKKPAEAPAGLDP-----SVFSKFVTTVKCDDGTSSEHTDWIEPLAHGLRHPYNFCSQNKFAPSEVYTDRVVAVIYNRTYLLLANRQGVDSVRGARGDCERRECQVFFFDLGATAYRQSDKEPGQSWFVRSYAAAGLPFDRMFEWEARAMSPAEIFNE-VPKELLKVYSYFNIPATTDTKDPSHAVNILKSLAKPGDFVVFKLDIDAAAVEIPILKALTEDPEAVKLVDEFFFEHHVNFPPMRPYWGGTLDEGIGLAESMQLFLEIRKKGVRAHSW 397          
BLAST of jgi.p|Trimin1|176775 vs. uniprot
Match: A0A7S1IDG3_9EUGL (Hypothetical protein (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IDG3_9EUGL)

HSP 1 Score: 142 bits (357), Expect = 4.740e-36
Identity = 101/326 (30.98%), Postives = 152/326 (46.63%), Query Frame = 1
Query:    4 YEPSEWEQEWSNHVSEWSDPGTG-KRLCAKMKEREEYVAAWDKGVAQAQADGCGALDTRLRD--------QAVFSRYVYKNTCTEEEAST-VIEPLAGLTRHPRANCFDRQHLVDRGYLLLGRTSDRCRTRMAEPAALSMVRAVEDQRVLLFDMGASLYSDGKGG--SSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIEQLQRDPELRLLIDEMFFEHHVNVEAMYKSWKTQGETQR------LSDTYKMIGGFRRQGLRFHSW 927
            Y PS  EQ WS ++  W+D      + C   +E + Y+  W   +       C  L ++ +         Q  FS +  +++C   E     +EPLA   RHP   C     LV RG     +T D   T        S  RA   +R   FD+G++ Y+ G  G   S  WFV   ++ G    E + WE   ++ +  WK+ VP+D+    H+ NV    DP    N    ++ VAR ED V  KLDID++ IE   ++QL   P+L+ L+DE+F+EHHV++  M   W   G+  R      + D+Y+     R+ G+R HSW
Sbjct:   22 YVPSLLEQHWSTNIHRWTDNTKNWTKGCNAYREDKSYIDKWKSWMR------CERLSSKDKSTHGECGYSQDTFSYHEVRSSCNSSEVKREYLEPLAVALRHPEVPC----DLVGRGK---DKTGD---TNWIVFPQWSNRRA---RRSYFFDLGSTTYTAGMFGHRDSLAWFVQRFRQKGTEFDEIFAWEKNTINALRYWKK-VPNDMVAKMHFYNVATTTDPHDSQNALRIVEEVARPEDFVVFKLDIDSNHIEQLIVQQLIDSPKLQGLVDELFWEHHVSLSPM--QWYGWGDASRFPNTGTIMDSYRNFTKLRQLGIRAHSW 325          
BLAST of jgi.p|Trimin1|176775 vs. uniprot
Match: A0A7S0MTF5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MTF5_9CRYP)

HSP 1 Score: 141 bits (355), Expect = 4.910e-36
Identity = 84/240 (35.00%), Postives = 128/240 (53.33%), Query Frame = 1
Query:    1 RYEPSEWEQEWSNHVSEWSDPGTGKRLCAKMKEREEYVAAWDKGVAQAQADGCGALDTRLRDQAVFSRYVYKNTCTEEEASTVIEPLAGLTRHPRANCFDRQHLVDRGYLLLGRTSDRCRTRMAEPAALSMVRAVEDQRVLLFDMGASLYSDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDID 720
            ++ PS +E+ W+++V    +      +CA+  ++   V  W   +A A+A    A       ++VFS++V++NTCT E  +  IEPLAGLTR P         LV + YL++          +++  A+S     +     LFD+GAS Y++G GG+SQ WFV++ +  GV     + WE        VW   +P  LKP YHW N+P NP+P   DN   +IK +AR ED V +K+DID
Sbjct:  102 QFYPSAYEKYWTDNVVTLQND-----VCAESNKQILEVEEW---MAHAEAS---AQKQEALPESVFSKFVFENTCTGEIVTDYIEPLAGLTRSPFFCLKGEPFLVQKDYLVIS-------WNVSKKVAVSPAYTPKSY---LFDLGASTYNNGAGGASQSWFVESYEARGVRWDGIYAWEVTEHPPPNVWSI-IPPHLKPIYHWYNIPVNPEPNHPDNAMEYIKRIARPEDFVVLKIDID 319          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176775 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBV5_9STRA2.550e-238100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJK4_9STRA3.090e-16972.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ26_9STRA3.230e-16068.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CAP5_9STRA4.340e-10650.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z898_9STRA7.920e-10253.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4CA73_9EUGL9.020e-4833.90Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S1QAX9_NEODS2.180e-3830.00Hypothetical protein n=1 Tax=Neobodo designis TaxI... [more]
A0A2V0P754_9CHLO6.360e-3731.38Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A7S1IDG3_9EUGL4.740e-3630.98Hypothetical protein (Fragment) n=2 Tax=Eutreptiel... [more]
A0A7S0MTF5_9CRYP4.910e-3635.00Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_141contigContig_141:329037..332741 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|176775|e_gw1.141.29.1
Max annot lvl2759|Eukaryota
EggNOG OGs2E1YJ@1|root,2S980@2759|Eukaryota
Evalue6.79e-46
Seed ortholog130081.XP_005707652.1
Hectar predicted targeting categoryother localisation
TranscriptId177097
TrackFilteredModels1
ProteinId176775
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176775gene_13402Tribonema minus UTEX_B_3156 geneContig_141 329037..332741 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176775Trimin1|176775|e_gw1.141.29.1Tribonema minus UTEX_B_3156 polypeptideContig_141 329037..332741 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13402_1exon_13402_1Tribonema minus UTEX_B_3156 exonContig_141 329037..329239 +
exon_13402_2exon_13402_2Tribonema minus UTEX_B_3156 exonContig_141 329606..329801 +
exon_13402_3exon_13402_3Tribonema minus UTEX_B_3156 exonContig_141 330281..330457 +
exon_13402_4exon_13402_4Tribonema minus UTEX_B_3156 exonContig_141 331162..331293 +
exon_13402_5exon_13402_5Tribonema minus UTEX_B_3156 exonContig_141 332517..332741 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13402CDS_13402Tribonema minus UTEX_B_3156 CDSContig_141 329037..329239 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13402 ID=mRNA_13402|Name=jgi.p|Trimin1|176775|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=933bp|location=Sequence derived from alignment at Contig_141:329037..332741+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AGGTATGAGCCGAGCGAGTGGGAGCAGGAGTGGAGCAATCATGTCAGCGA
ATGGAGTGATCCTGGCACTGGAAAGCGGCTATGCGCGAAGATGAAGGAAA
GGGAAGAGTACGTGGCCGCGTGGGACAAGGGCGTGGCTCAGGCACAAGCG
GATGGGTGCGGGGCTCTGGATACTAGGCTGCGTGATCAGGCGGTCTTCTC
CAGGTATGTATACAAAAACACTTGCACAGAGGAGGAGGCCAGTACGGTAA
TAGAGCCCTTGGCGGGGCTCACGCGCCATCCGCGTGCCAACTGCTTCGAT
CGCCAGCACCTCGTGGACAGGGGCTACTTGCTGCTGGGCAGGACGAGTGA
CAGGTGCAGAACGCGCATGGCGGAGCCTGCGGCGCTCAGCATGGTGAGAG
CTGTGGAGGACCAGAGGGTTCTGCTCTTCGACATGGGGGCATCGCTGTAT
TCAGATGGGAAAGGAGGGTCCAGTCAGCAGTGGTTTGTGGACACACTGAA
GAAGCATGGGGTGCACCGGCTGGAGTACTGGGGGTGGGAAGCAGAGGCAC
TGGACACGGTTGAAGTGTGGAAGCAGCAGGTGCCAGATGACCTGAAACCA
TTCTACCACTGGATCAATGTGCCAGCCAACCCAGACCCAAAGTCAGGAGA
CAATCCGTGGAACTTCATCAAGGCAGTGGCAAGAATGGAGGATCACGTGT
TTGTCAAGCTGGACATTGACAACAGTCCCATTGAGCTTGCATTCATTGAG
CAGCTGCAAAGGGATCCGGAACTTCGGTTGCTGATTGATGAGATGTTCTT
CGAACACCATGTCAATGTGGAAGCCATGTACAAGAGCTGGAAAACGCAGG
GCGAGACTCAGCGCTTGAGCGACACATACAAGATGATCGGAGGATTCCGA
CGACAGGGCTTGCGTTTCCACAGCTGGCCATGA
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protein sequence of jgi.p|Trimin1|176775

>Trimin1|176775|e_gw1.141.29.1 ID=Trimin1|176775|e_gw1.141.29.1|Name=jgi.p|Trimin1|176775|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=311bp
RYEPSEWEQEWSNHVSEWSDPGTGKRLCAKMKEREEYVAAWDKGVAQAQA
DGCGALDTRLRDQAVFSRYVYKNTCTEEEASTVIEPLAGLTRHPRANCFD
RQHLVDRGYLLLGRTSDRCRTRMAEPAALSMVRAVEDQRVLLFDMGASLY
SDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKP
FYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIE
QLQRDPELRLLIDEMFFEHHVNVEAMYKSWKTQGETQRLSDTYKMIGGFR
RQGLRFHSWP*
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mRNA from alignment at Contig_141:329037..332741+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13402 ID=mRNA_13402|Name=jgi.p|Trimin1|176775|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3705bp|location=Sequence derived from alignment at Contig_141:329037..332741+ (Tribonema minus UTEX_B_3156 )
AGGTATGAGCCGAGCGAGTGGGAGCAGGAGTGGAGCAATCATGTCAGCGA ATGGAGTGATCCTGGCACTGGAAAGCGGCTATGCGCGAAGATGAAGGAAA GGGAAGAGTACGTGGCCGCGTGGGACAAGGGCGTGGCTCAGGCACAAGCG GATGGGTGCGGGGCTCTGGATACTAGGCTGCGTGATCAGGCGGTCTTCTC CAGGTGCTTAAATCTGCTCGGAAGTTGATGTCCCTCGGCCCAAGCTCTTT GAAATTGGCTCGCCTGTGCGCGTTGCTGCTGAGCATGCGAGCTGACAAAA TTTGCCGGTTTACCAATTTATCATTTATGGAAGGTCCTTGAACTTATGAG CTGAAGCATCAAATCATGCTAAGACTGCTTTGGTTGATGGCGTTCTGAGG ATCGTCCTTCAATTTCTTAGCCAAAGCGTTAATCTGTTCACTTGGGACTG CTCTTTCTGAGAGTGCTTGTGGCGTGTGATGCATGCTTGCAAGAAGCACC TTTAAGCACTTCTGGGCATGGCTGCAGCATAACACACTCTGTTGTCTCAT CCTGTGGCGCGTGACGCAGGTATGTATACAAAAACACTTGCACAGAGGAG GAGGCCAGTACGGTAATAGAGCCCTTGGCGGGGCTCACGCGCCATCCGCG TGCCAACTGCTTCGATCGCCAGCACCTCGTGGACAGGGGCTACTTGCTGC TGGGCAGGACGAGTGACAGGTGCAGAACGCGCATGGCGGAGCCTGCGGCG CTCAGCATGGTGAGAGTCACAGAATTCATATCATACTTGAAGTATTGGCA CAAACATCAATTGCCGTGAAAGCCGCCGCTGCCATGCAACGATGATGGCG ATCACTTCAGAGTGATCTGCATGTGATGATGGAATGCGGGCTGCTATCTG GGGGAGGGGGGCGGGGGGGAAAGGGGGGTCATGAAACACCTTGGAGTCAA CTTGAAGTACAATTTCTGATTGTGAAGTGTGCTGCAGAAGTACCCATGTA CCTTCCTGCAAAGCAAATGCGCATCCAATACAACAATCAATGTCTCACTG GCACGTGATAATTAACTTGCCGGGTGTTGCCTTGCAGTATCTCGTTGAAT GATTTGCGGAAGACGATGTGGAAGGCCTGCTTGAATCCATGGCCCACCTG CTTGAGATAATGGCCCACCCATGCCTGTCTCTCCGAAAAAGACTACGCAA GTGGCTTATCCGCAACGTGACCGTAATTGCTGTTGCATCACCAGGCTGTG GAGGACCAGAGGGTTCTGCTCTTCGACATGGGGGCATCGCTGTATTCAGA TGGGAAAGGAGGGTCCAGTCAGCAGTGGTTTGTGGACACACTGAAGAAGC ATGGGGTGCACCGGCTGGAGTACTGGGGGTGGGAAGCAGAGGCACTGGAC ACGGTTGAAGTGTGGAAGCAGGTAACTGCCCAACGACAGCATTACTGTAT GTTGAGTTTGCACGTGCGCTTCACGTGGCTGCATGCCGATTGGTAATTTA CGCATCAGTACCCAGAAGTGTGCGGTGCATATGCCGTTGTCTTGACATCG GACCTGCTAAAAAGATTGCGGCCATAATGCTGAGGGAGCTGCAGATGATG CGTGCTGCACACATGCCTATGCCTGGACAAGCTTTGAATCGACAAAGCAA AAGCAGATCTGCAATGCCATGCAAATTGAAGGATAATCAAGGACTATATG GACCAACCAGCCGCCATGCATGTCAGCTGAAGATGGGCAGACAAGCTCAA CATATATTGTGTGTGCCGCGTCCAGGCTCTCATTGCAGGGCTCTGCGCTG TTGTTTGCACGTCATTTTAAAGCAATGTAATGAATAGAAGTACATGTTAT GTCGCACTCCTTCAGTGATTGACATCCTGCCTAACGCTCAGAAGTGTTGG CACATGCACACATGCGCGCGCGTGCACACATAATAGACACACACACACAC ACGGACCTACACATTATTATTGTGCCTGCCACACAACTTGCGCTGAATTA TGCATGCGGTTTTCTGAATGGGTGACCCAATGCATGGTGATCGGCGTTCT TCATTCAGCAGAACGCTATACTAGCGCTTGATGAGCAGTGTTGCTGCTCT CTGTTTGGATTGCTGTGCCTCTGAGCAGGTGCCAGATGACCTGAAACCAT TCTACCACTGGATCAATGTGCCAGCCAACCCAGACCCAAAGTCAGGAGAC AATCCGTGGAACTTCATCAAGGCAGTGGCAAGAATGGAGGATCACGTGTT TGTCAAGGTGAGCCAAGCACTGCTATGCTACTATTGTGCGATTGCGCTTC AGTACATTGTCAGATTGCATCAAGCTGATGACCTAATGAGTCGTGTGTGC CGGCCAAAGTGCCCTTGCATGTGAGCTACAGGCATCAACTGCAGGCACAA ACGGCCATTTCACTGTAAAAGTATACCAGCGTGTCCATGTAGCGACTGAG TGTGTCATCCATGCTTCATCTTTAAAAATTCAAAAGCACATCAAGGGGTG GTACCAGTGTGCAAGCTTCTTCCTTGCTCTATGCGGCTTCGCAGACCTTG CAATGACAGTAGAGCTCCGGGATGGAAAACGGTGTGTGGGTTCTACCTCT GTGCACACCGCGGGAGGGCGCAAGAGACTTGTTGTTCACAAACATTGGTT AACGCATACAACAATTTGGCCATCTGCGCCCTTCATGCCGCATTCACCTC ATGATATACTCTGAAGTGCCATGCATCGTGGCCATGTGTTTTGCCAGTTA CTGTGTAGGCCATGCTCATTCACAGCAATGTTCGCTGGTGTTAGTTGCAA GTAAGAAAAATCACCAGTAAAATAGGTTCGCCATGTGTTTTGCCATTAAT ATTGTGCCGCATTGGGATTTGTGCCTGAGTATGTACCATCTGCTGCAGCA TCACTTCTACACGCTGTCATGTCACATCCTGATGATGTAGCTGGAACGCG CTGACACCGTCTCATAGTTTTTCACTTGCATGCTGTGACTACCTGAATAG CACGAGCTCGAAAGTTTCATGCAACATTGAGGGTTGATGGTGTATTGTTG GTCTCACTGGTTGTACTTTTTATTAATTCTCGCTCAGGGCGCGAAAAAGC CCAGATGATTGGCATCTAGCTGTAAGGAATCTACATGTCGTATGACAGTC TGAAAGTGTCGCAACGACAACCACTCAAACGCCGCCGCCGCCAAATGGCA TCTCGGGGTCCTCCCCTACGTCCTCCTCCATGTGCCCCCCCCCCTGGATT CTGCCATGTGTGTCATGACACGGCCAGAGTACGCCATGTGGAGCGCTGCC GACAGTGCCGAGCGTAAGCGCGCCAGGGCTGTACTTTGAGTACTCTTTTG CGACATGCGGGACTATACGCCATACGGCATGTCCCTCATTGAGCATACTT TCACTGGCATCAGGCCTCAGTCAACTTTGAGGACACGTGCTTACGCATCT GTTGCTGTGCTGCTTCTTGCTCTGCTTCAGCTGGACATTGACAACAGTCC CATTGAGCTTGCATTCATTGAGCAGCTGCAAAGGGATCCGGAACTTCGGT TGCTGATTGATGAGATGTTCTTCGAACACCATGTCAATGTGGAAGCCATG TACAAGAGCTGGAAAACGCAGGGCGAGACTCAGCGCTTGAGCGACACATA CAAGATGATCGGAGGATTCCGACGACAGGGCTTGCGTTTCCACAGCTGGC CATGA
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Coding sequence (CDS) from alignment at Contig_141:329037..332741+

>mRNA_13402 ID=mRNA_13402|Name=jgi.p|Trimin1|176775|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=933bp|location=Sequence derived from alignment at Contig_141:329037..332741+ (Tribonema minus UTEX_B_3156 )
AGGTATGAGCCGAGCGAGTGGGAGCAGGAGTGGAGCAATCATGTCAGCGA
ATGGAGTGATCCTGGCACTGGAAAGCGGCTATGCGCGAAGATGAAGGAAA
GGGAAGAGTACGTGGCCGCGTGGGACAAGGGCGTGGCTCAGGCACAAGCG
GATGGGTGCGGGGCTCTGGATACTAGGCTGCGTGATCAGGCGGTCTTCTC
CAGGTATGTATACAAAAACACTTGCACAGAGGAGGAGGCCAGTACGGTAA
TAGAGCCCTTGGCGGGGCTCACGCGCCATCCGCGTGCCAACTGCTTCGAT
CGCCAGCACCTCGTGGACAGGGGCTACTTGCTGCTGGGCAGGACGAGTGA
CAGGTGCAGAACGCGCATGGCGGAGCCTGCGGCGCTCAGCATGGTGAGAG
CTGTGGAGGACCAGAGGGTTCTGCTCTTCGACATGGGGGCATCGCTGTAT
TCAGATGGGAAAGGAGGGTCCAGTCAGCAGTGGTTTGTGGACACACTGAA
GAAGCATGGGGTGCACCGGCTGGAGTACTGGGGGTGGGAAGCAGAGGCAC
TGGACACGGTTGAAGTGTGGAAGCAGCAGGTGCCAGATGACCTGAAACCA
TTCTACCACTGGATCAATGTGCCAGCCAACCCAGACCCAAAGTCAGGAGA
CAATCCGTGGAACTTCATCAAGGCAGTGGCAAGAATGGAGGATCACGTGT
TTGTCAAGCTGGACATTGACAACAGTCCCATTGAGCTTGCATTCATTGAG
CAGCTGCAAAGGGATCCGGAACTTCGGTTGCTGATTGATGAGATGTTCTT
CGAACACCATGTCAATGTGGAAGCCATGTACAAGAGCTGGAAAACGCAGG
GCGAGACTCAGCGCTTGAGCGACACATACAAGATGATCGGAGGATTCCGA
CGACAGGGCTTGCGTTTCCACAGCTGGCCATGA
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