Trimin1|347678|estExt_Genemark1.C_Ctg_140132 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347678
Unique NameTrimin1|347678|estExt_Genemark1.C_Ctg_140132
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length427
Homology
BLAST of jgi.p|Trimin1|347678 vs. uniprot
Match: A0A835ZC86_9STRA (PFtsY, plastid signal recognition particle receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC86_9STRA)

HSP 1 Score: 801 bits (2069), Expect = 3.720e-292
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0
Query:    1 MVFDFFKKRATEGIKQVENIAGKAVEGKLGEALQDTAAYVKVRREADAENFAKFTQGLTKSREKFLGDLSKALGRGDTLDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPSAIKFAPADSGVPSVLFVMGANGMGKTTTIGKIAARLKGQDLKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYSAETAEGLRQRFAANSVLQERLREKMDNKPAPPKPQPVISMGEMQVSRKARRKSSGKKAKK 426
            MVFDFFKKRATEGIKQVENIAGKAVEGKLGEALQDTAAYVKVRREADAENFAKFTQGLTKSREKFLGDLSKALGRGDTLDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPSAIKFAPADSGVPSVLFVMGANGMGKTTTIGKIAARLKGQDLKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYSAETAEGLRQRFAANSVLQERLREKMDNKPAPPKPQPVISMGEMQVSRKARRKSSGKKAKK
Sbjct:    1 MVFDFFKKRATEGIKQVENIAGKAVEGKLGEALQDTAAYVKVRREADAENFAKFTQGLTKSREKFLGDLSKALGRGDTLDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPSAIKFAPADSGVPSVLFVMGANGMGKTTTIGKIAARLKGQDLKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYSAETAEGLRQRFAANSVLQERLREKMDNKPAPPKPQPVISMGEMQVSRKARRKSSGKKAKK 426          
BLAST of jgi.p|Trimin1|347678 vs. uniprot
Match: D7FVJ7_ECTSI (PFtsY, plastid signal recognition particle receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ7_ECTSI)

HSP 1 Score: 433 bits (1113), Expect = 2.180e-145
Identity = 236/394 (59.90%), Postives = 289/394 (73.35%), Query Frame = 0
Query:    1 MVFDFFKKRATEGIKQVENIAGKAVEGKLGEALQDTAAYVKVRREADAENFAKFTQGLTKSREKFLGDLSKALGRGDTLDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPSAIKFAPADSGVPSVLFVMGANGMGKTTTIGKIAARLK---GQDLKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYSAETAEGLRQRFAANSVLQERLREKM 391
            M+FDF KKRA EG++Q +N+   A  G+L EAL++T+AYVK R        AKF+ GL +SR +F+GDL    G    L+ETL  LEE L+ +D+G+ T+ QII+ LR+ A + + +LEP+D+  VLR TLI+VL G  +   EG  + +AI FA    GVPSVLF MGANGMGKTTT+GK+A+RL+   GQ  KVLL AADTFRAAAVEQL EW+ R+  DIV PLD +ERP SV  RA E+AV  GYDV++VDTSGRLSNN  LN+ELK +K ++   I GAPH+TLLVVDASVGRNA  QA+TWK EVG+S L VTKLDGTAR GFVVSIV DLGVPVKLIGVGE L DLRDF+  LFVD+LLGYS E A  L+  F AN V+Q R+ E+M
Sbjct:   95 MLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKDRN-------AKFSDGLAQSRLRFVGDLENLFGMAGPLEETLEKLEEALLQADLGATTSFQIIEDLRNTAKAEDRRLEPDDIKSVLRATLIQVLNGGTMPSAEGGGDTAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLREDGGQ--KVLLAAADTFRAAAVEQLNEWAERSGADIVVPLDKDERPPSVVARAAEKAVSEGYDVLIVDTSGRLSNNYSLNEELKDMKKALSDRIPGAPHDTLLVVDASVGRNAVDQARTWKQEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLIGVGESLYDLRDFEPVLFVDSLLGYSPEDASRLQAIFEANPVMQARMLERM 479          
BLAST of jgi.p|Trimin1|347678 vs. uniprot
Match: A0A6H5KTL2_9PHAE (SRP54 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL2_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 5.720e-135
Identity = 222/380 (58.42%), Postives = 271/380 (71.32%), Query Frame = 0
Query:    1 MVFDFFKKRATEGIKQVENIAGKAVEGKLGEALQDTAAYVKVRREADAENFAKFTQGLTKSREKFLGDLSKALGRGDTLDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPSAIKFAPADSGVPSVLFVMGANGMGKTTTIGKIAARLK---GQDLKVLLCAADTFR-----------AAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYS 366
            M+FDF KKRA EG++Q +N+   A  G+L EAL++T+A             AKF+ GL +SR +F+GDL    G    L+ETL  LEE L+ +D+G+ T+ QII+ LR+ A + + +LEP+D+  VLR TLI+VL G  + P EG  + +AI FA    GVPSVLF MGANGMGKTTT+GK+A+RL+   GQ  KVLL AADTFR           AAAVEQL EW+ R+  DIV PLD +ERP SV  RA E+AV  GYDV++VDTSGRLSNN  LN+ELK +K ++   I GAPH+TLLVVDASVGRNA  QA+TWK EVG+S L VTKLDGTAR GFVVSIV DLGVPVKLIGVGE L DLRDF+  LFVD+LLGYS
Sbjct:    3 MLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAN------------AKFSDGLAQSRLRFVGDLENLFGMTGPLEETLGKLEEALLQADLGATTSFQIIEDLRNTAKAEDRRLEPDDIKSVLRATLIQVLNGGTMPPAEGGGDTAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLREDGGQ--KVLLAAADTFRIEVIXXXXXXXAAAVEQLNEWAERSGADIVVPLDKDERPPSVVARAAEKAVSEGYDVLIVDTSGRLSNNYSLNEELKDMKKTLSDRIPGAPHDTLLVVDASVGRNAVDQARTWKQEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLIGVGESLYDLRDFEPVLFVDSLLGYS 368          
BLAST of jgi.p|Trimin1|347678 vs. uniprot
Match: A0A4D9DHK9_9STRA (SRP54 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DHK9_9STRA)

HSP 1 Score: 388 bits (997), Expect = 5.850e-128
Identity = 224/381 (58.79%), Postives = 269/381 (70.60%), Query Frame = 0
Query:    1 MVFDFFKKRATEGIKQVENIAGKAVEGKLGEALQDTAAYVKVRREADAENFAKFTQGLTKSREKFLGDLSKALGRGDT--LDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPSAIKFAPADSG--VPSVLFVMGANGMGKTTTIGKIAARLKGQ-DLKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYSAETAEGLRQR 376
            MVFDF +KRA EGI+QV+NIA K  EGK  EAL DTA+YVK R+E DAEN AK  +GL KSR++ +GDL    G  +   L +TL  LEEVLM SDIG+ATT +IID LR +A +   KLEP+DV  VLR  LIE L            +    K A A +G   P VLFV+GANGMGKTTTIGKIA+RLK + +  VL+ A DTFRAAAV+QLEEW+ RA VDI +P + + +P  V + A  +A+EG YDV++VDTSGRLSNN  LN+ELK +K +I   I G PHETLLV+D +VGRN   QAK W  EVG++GL +TKLDGTAR G VVSIVRD+GVPVKLIGVGEG+ DLRDF+ E FVDALLGY  E    L  R
Sbjct:   74 MVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAE--KLEPDDVKSVLRLRLIEALTAKD-------RSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIAEGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEAR 445          
BLAST of jgi.p|Trimin1|347678 vs. uniprot
Match: A0A7S2BL25_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BL25_9STRA)

HSP 1 Score: 375 bits (962), Expect = 1.970e-122
Identity = 212/401 (52.87%), Postives = 271/401 (67.58%), Query Frame = 0
Query:    1 MVFDFFKKRATEGIKQVENIAGKAVEGKLGEALQDTAAYVKVRREADAENFAKFTQGLTKSREKFLGDLSKALGRGDTLDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLE-----------------GANNPSAIKFAPAD---SGVPSVLFVMGANGMGKTTTIGKIAARLKGQD-LKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYSAETAEGLRQRFAAN 380
            M+FDFF+ RATEG++Q+ENIA KA +GK+GEA +DTA YV V  E       KF  GL KSR++ + +L    G    L+ETL  LEE+LM +DIG  TT +I+  LR  A   + +L+PED+  VLRG L+  L G   G L                  G N   AI FA  +   +G+P+VLFV+GANGMGKTTTIGK+A RL+ +   KVLL A DTFRAAAVEQLE WS RAEVD   P   +++P  V   A ++A+EG YDV++VDTSGRL+NNR LN+ELK ++ +I + I   PHETLLVVDA +GRNA  QA+ W+ EV VSG+ VTKLDGTARAGFVV++ RDLG+P+KLIGVGE + DLRDF+   FVDALLGY  + ++ L++R   N
Sbjct:   90 MIFDFFRDRATEGLEQIENIASKASQGKIGEAFEDTANYVSVTNE-------KFYDGLAKSRDQLISNLDSLFGGDMRLEETLEKLEELLMMADIGGTTTDEIMTDLRRTA--KDDRLDPEDIKSVLRGRLVATLDGRGGGDLASVVEASVDVANKENVDTGKNTSRAIAFASPEERANGMPTVLFVIGANGMGKTTTIGKLAHRLRNESGQKVLLAACDTFRAAAVEQLEMWSERAEVDFTGPRSDKDKPAFVLGAAIDKAIEGKYDVLIVDTSGRLANNRPLNEELKKMRRTIENKIGRPPHETLLVVDALIGRNAVDQAQIWQEEVQVSGVVVTKLDGTARAGFVVAMCRDLGLPIKLIGVGEKIDDLRDFEPGSFVDALLGYDDDASQALQKRLDEN 481          
BLAST of jgi.p|Trimin1|347678 vs. uniprot
Match: W7U0S2_9STRA (Signal recognition particle-docking protein FtsY n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0S2_9STRA)

HSP 1 Score: 388 bits (997), Expect = 1.040e-120
Identity = 224/381 (58.79%), Postives = 269/381 (70.60%), Query Frame = 0
Query:    1 MVFDFFKKRATEGIKQVENIAGKAVEGKLGEALQDTAAYVKVRREADAENFAKFTQGLTKSREKFLGDLSKALGRGDT--LDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPSAIKFAPADSG--VPSVLFVMGANGMGKTTTIGKIAARLKGQ-DLKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYSAETAEGLRQR 376
            MVFDF +KRA EGI+QV+NIA K  EGK  EAL DTA+YVK R+E DAEN AK  +GL KSR++ +GDL    G  +   L +TL  LEEVLM SDIG+ATT +IID LR +A +   KLEP+DV  VLR  LIE L            +    K A A +G   P VLFV+GANGMGKTTTIGKIA+RLK + +  VL+ A DTFRAAAV+QLEEW+ RA VDI +P + + +P  V + A  +A+EG YDV++VDTSGRLSNN  LN+ELK +K +I   I G PHETLLV+D +VGRN   QAK W  EVG++GL +TKLDGTAR G VVSIVRD+GVPVKLIGVGEG+ DLRDF+ E FVDALLGY  E    L  R
Sbjct:   74 MVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAE--KLEPDDVKSVLRLRLIEALTAKD-------RSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEAR 445          
BLAST of jgi.p|Trimin1|347678 vs. uniprot
Match: K8Z941_NANGC (Fused signal recognition particle receptor n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z941_NANGC)

HSP 1 Score: 344 bits (882), Expect = 1.060e-112
Identity = 199/347 (57.35%), Postives = 243/347 (70.03%), Query Frame = 0
Query:   35 DTAAYVKVRREADAENFAKFTQGLTKSREKFLGDLSKALGRGDT--LDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPSAIKFAPADSG--VPSVLFVMGANGMGKTTTIGKIAARLKGQ-DLKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYSAETAEGLRQR 376
            ++A+YVK R+E DAEN AK  +GL KSR++ +GDL    G  +   L +TL  LEEVLM SDIG+ATT +IID LR +A +   KLEP+DV  VLR  LIE L            +    K A A +G   P VLFV+GANGMGKTTTIGKIA+RLK + +  VL+ A DTFRAAAV+QLEEW+ RA VDI +P + + +P  V + A  +A+EG YDV++VDTSGRLSNN  LN+ELK +K +I   I G PHETLLV+D +VGRN   QAK W  EVG++GL +TKLDGTAR G VVSIVRD+GVPVKLIGVGEG+ DLRDF+ E FVDALLGY  E    L  R
Sbjct:    8 ESASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAE--KLEPDDVKSVLRLRLIEALTAKD-------RSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEAR 345          
BLAST of jgi.p|Trimin1|347678 vs. uniprot
Match: A0A8J2ST57_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST57_9STRA)

HSP 1 Score: 330 bits (845), Expect = 2.030e-106
Identity = 189/350 (54.00%), Postives = 243/350 (69.43%), Query Frame = 0
Query:   31 EALQDTAAYVKVRREADAENFAKFTQGLTKSREKFLGDLSKALG-RGDTLDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPSAIKFAPADSGVPSVLFVMGANGMGKTTTIGKIAARLKGQD-LKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYSAETAEGLRQRFA 378
            +A    + + + R   D+   AKFT+GL KSR+ FL DL      +G +LD+TL  LE+ L+++DIG+ TT QI+D ++ +A +     E +DV  +LRG + E L          A  PS++  A A    P+V+ V+GANGMGKTTTIGK+A RL+ +   KVLL A DTFRAAAVEQLEEW+ RAEVDIV P    E P + A +AC+ A++G YDVV+VDTSGRL NNR L  EL  I+ ++   I GAPHE+LLVVDA+VGRNA  QA+ W+ +VGV+GLAVTKLDGTARAGFVVS+V+DLG+PVKL+GVGE L DLRDF+ E FVDALL      A+ LR+RFA
Sbjct:   37 QAADAASKFFEERARQDSLALAKFTEGLEKSRQNFLSDLRGIFDVKGASLDQTLEKLEDALLSADIGATTTDQILDDVKGVAQAQGDYTE-QDVTAILRGRMAEALS---------AGGPSSLTSAEAG---PTVILVLGANGMGKTTTIGKLARRLRAETGQKVLLAACDTFRAAAVEQLEEWAARAEVDIVVPDQGIESPAAAAYKACDVALQGDYDVVIVDTSGRLVNNRALTAELDKIRRTLEKKIPGAPHESLLVVDAAVGRNALDQARGWQQDVGVTGLAVTKLDGTARAGFVVSVVQDLGIPVKLVGVGETLDDLRDFEGERFVDALL--DVNDADDLRERFA 371          
BLAST of jgi.p|Trimin1|347678 vs. uniprot
Match: A0A7S2USP8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USP8_9STRA)

HSP 1 Score: 323 bits (829), Expect = 3.700e-103
Identity = 186/380 (48.95%), Postives = 241/380 (63.42%), Query Frame = 0
Query:    1 MVFDFFKKRATEGIKQVENIAGKAVEGKLGEALQDTAAYVK-VRREADAENFAKFTQGLTKSREKFLGDLSKALGRGDTLDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPSAIKFAPADSGVPSVLFVMGANGMGKTTTIGKIAARLKGQ-DLKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYSAETAEGLRQRFA 378
            MVFDF +KRA EG++QV NIA KA EGKL +AL++T  YVK                                               EVLM +DIG  TT Q+++ +R+ A   + K +PE +  +LRGTLIEVL        EG    +      ++   P+V+ V+GANGMGKTTTIGK++AR   + +LKVLL A DT+RAAAV+QL  W+ RAEVDIVKP++ +++P  V +   ++ V+ GYDV+++DTSGRLSNNR+LN++LK +K      +   PHETLLVVDA+VGRNA  QA+TWK E+GV GLAVTKLDGTA+ GF VSI +DLG+P+KLIGVGE + DLRDF+ E FVDALLG   E  E L  R A
Sbjct:   58 MVFDFIRKRAQEGVEQVANIAEKAAEGKLADALKETNEYVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVLMMADIGIKTTDQVLNTVRE-ASKGQEKADPEVIRSILRGTLIEVL--------EGPQGAAGRALGSSEGDGPTVIMVIGANGMGKTTTIGKLSARFAQEGNLKVLLGACDTYRAAAVDQLAVWAERAEVDIVKPVNPDDKPHLVVEATVDKGVKEGYDVIILDTSGRLSNNRQLNRQLKKMKDVATQRLGREPHETLLVVDAAVGRNAVDQARTWKEEIGVDGLAVTKLDGTAKGGFAVSITKDLGIPIKLIGVGEKIEDLRDFNPEGFVDALLGVKEEEVEALAARMA 428          
BLAST of jgi.p|Trimin1|347678 vs. uniprot
Match: A0A7S2EN25_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EN25_TRICV)

HSP 1 Score: 320 bits (821), Expect = 2.240e-102
Identity = 186/387 (48.06%), Postives = 240/387 (62.02%), Query Frame = 0
Query:    1 MVFDFFKKRATEGIKQVENIAGKAVEGKLGEALQDTAAYVKVRREADAENFAKFTQGLTKSREKFLGDLSKAL-GRGDTLDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPSAIKFAPADSGVPSVLFVMGANGMGKTTTIGKIAARLKGQD-LKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGA-------------PHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYSAETAEG 372
            MVFDFF+KR+ EG  QV+N+A  A  GKLGE L D A Y K   EA       F  GL KSR + L DL  A  G GD L+E    LE+ L+ +D+G  T   ++  +R +   S      +D+  VLRG LIE L G    P+        +KFA    G P+VLFVMGANGMGKTTTIGK+A+RL+ +   KVL+ A DTFRA AVEQLE W++RAEV+   P + ++ P +V   + + A+ GGYD ++VDTSGRLSNN  L QEL  +K  I   +  +             PHETLLV+DA+ GR A   A+ W  E+G++GL +TKLDG+AR G VV++ R+LG+PVKLIGVGEG+ DLRDFD E FVD LLG  +   +G
Sbjct:   33 MVFDFFRKRSEEGFAQVQNLADAASRGKLGEGLLDAALYTKETNEA-------FAVGLAKSRNRLLYDLEAAFSGGGDVLEE----LEDALIRADLGLGTAEDVLGEVRSLREDSTEIFSRDDLRSVLRGKLIEALEG----PIANGGMTRNVKFAEEGEGCPTVLFVMGANGMGKTTTIGKLASRLRNEGGQKVLVAACDTFRAGAVEQLEMWADRAEVECYSPSEEKKTPAAVLYGSLDAAIAGGYDTLIVDTSGRLSNNDALTQELAKMKRVIQKRLSKSNDEDGKPLMNFDVPHETLLVIDAAQGRMALESARQWNDEIGLTGLVLTKLDGSARGGSVVAVSRELGLPVKLIGVGEGIEDLRDFDPEAFVDGLLGIGSAGGKG 404          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347678 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZC86_9STRA3.720e-292100.00PFtsY, plastid signal recognition particle recepto... [more]
D7FVJ7_ECTSI2.180e-14559.90PFtsY, plastid signal recognition particle recepto... [more]
A0A6H5KTL2_9PHAE5.720e-13558.42SRP54 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A4D9DHK9_9STRA5.850e-12858.79SRP54 domain-containing protein n=1 Tax=Nannochlor... [more]
A0A7S2BL25_9STRA1.970e-12252.87Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7U0S2_9STRA1.040e-12058.79Signal recognition particle-docking protein FtsY n... [more]
K8Z941_NANGC1.060e-11257.35Fused signal recognition particle receptor n=1 Tax... [more]
A0A8J2ST57_9STRA2.030e-10654.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2USP8_9STRA3.700e-10348.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2EN25_TRICV2.240e-10248.06Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 161..369
e-value: 3.3E-6
score: 36.6
IPR013822Signal recognition particle SRP54, helical bundleSMARTSM00963SRP54_N_2coord: 54..135
e-value: 6.0E-6
score: 35.8
IPR013822Signal recognition particle SRP54, helical bundlePFAMPF02881SRP54_Ncoord: 77..115
e-value: 2.2E-5
score: 24.6
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 162..364
e-value: 1.9E-87
score: 306.5
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 162..364
e-value: 2.6E-64
score: 216.5
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPROSITEPS00300SRP54coord: 337..350
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3D1.20.120.140coord: 38..139
e-value: 1.6E-16
score: 62.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 157..364
e-value: 2.8E-68
score: 231.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 161..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..426
NoneNo IPR availablePANTHERPTHR43134SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHAcoord: 39..363
IPR004390Signal-recognition particle receptor FtsYPANTHERPTHR43134:SF7CELL DIVISION PROTEIN FTSY HOMOLOG, CHLOROPLASTICcoord: 39..363
IPR036225SRP/SRP receptor, N-terminalSUPERFAMILY47364Domain of the SRP/SRP receptor G-proteinscoord: 51..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_14contigContig_14:1234006..1243420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347678mRNA_3268Tribonema minus UTEX_B_3156 mRNAContig_14 1233959..1243420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347678|estExt_Genemark1.C_Ctg_140132 ID=Trimin1|347678|estExt_Genemark1.C_Ctg_140132|Name=jgi.p|Trimin1|347678|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=427bp
MVFDFFKKRATEGIKQVENIAGKAVEGKLGEALQDTAAYVKVRREADAEN
FAKFTQGLTKSREKFLGDLSKALGRGDTLDETLTGLEEVLMTSDIGSATT
LQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPS
AIKFAPADSGVPSVLFVMGANGMGKTTTIGKIAARLKGQDLKVLLCAADT
FRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVV
VDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQ
AKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDL
RDFDAELFVDALLGYSAETAEGLRQRFAANSVLQERLREKMDNKPAPPKP
QPVISMGEMQVSRKARRKSSGKKAKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR013822Signal_recog_particl_SRP54_hlx
IPR000897SRP54_GTPase_dom
IPR042101SRP54_N_sf
IPR027417P-loop_NTPase
IPR004390SR_rcpt_FtsY
IPR036225SRP/SRP_N