Trimin1|347662|estExt_Genemark1.C_Ctg_140105 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347662
Unique NameTrimin1|347662|estExt_Genemark1.C_Ctg_140105
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length403
Homology
BLAST of jgi.p|Trimin1|347662 vs. uniprot
Match: A0A835Z9W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W2_9STRA)

HSP 1 Score: 768 bits (1983), Expect = 7.310e-280
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0
Query:    1 MSHATFDDLFTTSCLSVSCTIAVETGWFFGMRLVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRMLRKAGLAQHPPHAVERCCGGCAWWCSXXXXXXXXXXXXXAQEDGDAPGSGTPAETPTGFTTPRHDTVYRQLVLRAVVSVAASALFTVVAAVLVMLDVYGVVDGIPVVGLSILDNGFTLGSIFFANSGGLGPHDRRPSRQQRRRSAQQRHTMSISKRPSMLLQTVLAPAHRPPAAADALWRRIGGDAGEAHIVMPRVSPPPLPAAPVEREQTVVCGGL 402
            MSHATFDDLFTTSCLSVSCTIAVETGWFFGMRLVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRMLRKAGLAQHPPHAVERCCGGCAWWCSXXXXXXXXXXXXXAQEDGDAPGSGTPAETPTGFTTPRHDTVYRQLVLRAVVSVAASALFTVVAAVLVMLDVYGVVDGIPVVGLSILDNGFTLGSIFFANSGGLGPHDRRPSRQQRRRSAQQRHTMSISKRPSMLLQTVLAPAHRPPAAADALWRRIGGDAGEAHIVMPRVSPPPLPAAPVEREQTVVCGGL
Sbjct:    1 MSHATFDDLFTTSCLSVSCTIAVETGWFFGMRLVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRMLRKAGLAQHPPHAVERCCGGCAWWCSXXXXXXXXXXXXXAQEDGDAPGSGTPAETPTGFTTPRHDTVYRQLVLRAVVSVAASALFTVVAAVLVMLDVYGVVDGIPVVGLSILDNGFTLGSIFFANSGGLGPHDRRPSRQQRRRSAQQRHTMSISKRPSMLLQTVLAPAHRPPAAADALWRRIGGDAGEAHIVMPRVSPPPLPAAPVEREQTVVCGGL 402          
BLAST of jgi.p|Trimin1|347662 vs. uniprot
Match: A0A835Z8K2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8K2_9STRA)

HSP 1 Score: 273 bits (699), Expect = 3.810e-86
Identity = 151/283 (53.36%), Postives = 186/283 (65.72%), Query Frame = 0
Query:   31 MRLVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRMLRKA--GLAQHPPHAVERCCGGCAWWCSXXXXXXXXXXXXXAQEDGDAPGSGTPAETPTGFTTPRHDTVYRQLVLRAVVSVAASALFTVVAAVLVMLDVYGVVDGIPVVGLSILDNGFTLGSIFFANS 311
            MRLV G RNA+AWTG  ASL TA YCVHELCY++++VA   ASCAQF+A+F++RG SN LAFLHLFLRANAVN+ NPKWPPWR  GI L + T+G +A    TR AKP  +PP P RC+EFI P+P TL W  QL+CH+ FA FFIWPL  HMR +R A  G +  P    +R                       +++   A  +GT A+ P G     +  VY+ LV RA  S+  SALFT++AAVL +L VYGV+  +PVVG SILDNGFTL SI+FANS
Sbjct:    1 MRLVSGTRNAIAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAWFVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPFPDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDVRAAHTGSSVAPATLFDR----------LKRRASKVRGAPASRDSSGADDNGT-ADFPGGG----NGDVYQALVTRAFASLTGSALFTLLAAVLSVLSVYGVLSDVPVVGFSILDNGFTLASIYFANS 268          
BLAST of jgi.p|Trimin1|347662 vs. uniprot
Match: A0A835ZIT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIT3_9STRA)

HSP 1 Score: 268 bits (684), Expect = 4.820e-83
Identity = 156/320 (48.75%), Postives = 200/320 (62.50%), Query Frame = 0
Query:    1 MSHATFDDLFTTSCLSVSCTIAVETGWFFGMRLVYGVRN---AMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRMLRKAGLA-QHPPHAVERCCGGCAWWCSXXXXXXXXXXXXXAQEDGDAPGSGTPAETPTGFTTPRHDTVYRQLVLRAVVSVAASALFTVVAAVLVMLDVYGVVDGIPVVGLSILDNGFTLGSIFFANSGGLGP 316
            MS  TF DLF             ETGWFFG R + G +     + WTGFLAS+ T  YCV+ELCYY+V++A + A CA FK + ++R ASN+LAFLHLFLRA+AVN++NP WPPWRR GIAL V TL +L  VAATR A+   +PP   RC++   P+   LKW +QL+CHI F+  FI+PL+ HMR +R AGLA  H P +  R                       A E+  A      A   TG    R DTVY++LV RAV+S+ AS+LFT+  AV+V LD++G V  +P+V  +ILDNGFTLG+I+FANSGGL P
Sbjct:    1 MSSVTFQDLF-------------ETGWFFGARALQGSKRHPLMIHWTGFLASVLTIFYCVYELCYYYVNMASRDAHCAVFKVWIVMRTASNALAFLHLFLRADAVNAINPNWPPWRRFGIALLVATLIMLIAVAATRSARLVRNPPFGERCEQSYEPVSFALKWVVQLLCHITFSLMFIYPLVDHMRAVRAAGLAVAHTPRSFLR----------RVLRRTVQKPSVTATENARAREDSNTAPV-TGSM--RGDTVYQRLVRRAVISLVASSLFTIAVAVMVFLDIFGAVSDMPLVAFAILDNGFTLGAIYFANSGGLTP 294          
BLAST of jgi.p|Trimin1|347662 vs. uniprot
Match: A0A835Z9N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N7_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.770e-48
Identity = 125/314 (39.81%), Postives = 166/314 (52.87%), Query Frame = 0
Query:    1 MSHATFDDLFTTSCLSVSCTIAVETGWFFGMRLVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFF-ILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRMLRKAGLAQHPPHAVERCCGGCAWWCSXXXXXXXXXXXXXAQEDGDAPGSGTPAETPTGFTTPRHDTVYRQLVLRAVVSVAASALFTVVAAVLVMLDVYGVVDGIPVVGLSILDNGFTLGSIFFANSGG 313
            M+   F   F T+CL+ +  IA+E GWFFG R V    NAM  TGF+ASL    YC  +L Y++    +   SC Q K    + +G+SN+LAFLHLFLRA+AVN +N  W PWR  GIALT +    L  V  TR A    S     RC+          KW +QL+ H+ F+  F++PL  HM+ + +AG+     HA        A   S                   + GS T AE PT   + R   V+R+LV RA +S+A S+ FT+V A++V +        +PVV LS LDNG TL SI+FANSGG
Sbjct:    1 MTEGQFFAYFETTCLTTTFIIALEVGWFFGERCVLRKANAMNITGFMASLIAVTYCFLKLIYFYTGAEE--LSCDQLKIILGVGQGSSNALAFLHLFLRADAVNKINTHWRPWRWFGIALTALNWATLLAVCFTRTAVLATS--GSQRCKFTFDQSTFEAKWVVQLLNHVVFSMMFVFPLRQHMKEMHRAGVEHQRQHAXXXXXXXXAPNSSVAM----------------STGSRTSAE-PTATGSSRGADVFRRLVWRATLSMAISSAFTLVVAIMVFVQFADPNIDLPVVALSNLDNGLTLASIYFANSGG 293          
BLAST of jgi.p|Trimin1|347662 vs. uniprot
Match: A0A835Z0T7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T7_9STRA)

HSP 1 Score: 150 bits (378), Expect = 3.270e-37
Identity = 113/326 (34.66%), Postives = 160/326 (49.08%), Query Frame = 0
Query:    8 DLFTTSCLSVSCTIAVETGWFFGMRLVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFIL-RGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPS-RCQEFIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRMLRKAGLAQHPPHAVERCCGGCAWWCSXXXXXXXXXXXXXAQEDGDAPGSGTPAETPTGF------------TTPRHDTVYRQLVLRAVVSVAASALFTVVAAVLVMLDVYGVVDGIPVVGLSILDNGFTLGSIFFANSGGLGPHDR 319
            + F   CL+++ TI ++  +FFG R +   RN M  TGFLA++  A+Y + +  + F  +    + C   +    L +G SN  AFLHLFLRA+A+N++NPKWPPWR  GI LTV        V+  R  K +A     + RC  +   I +  KW LQLI H+ F+ FF WPL+ HMR + +A +                                          +GT A +  GF            T+ R   VY +LV RAVV +  S++FT+V  +L ++D       IP+  LSILDNG TLGSI FAN G    ++R
Sbjct:   21 EYFEIFCLAITFTIGLQVTFFFGERWLTMRRNMMNATGFLAAIIAAVYTLVKALHLFSGIG--LSECNALRISLGLGQGLSNGFAFLHLFLRADAINAINPKWPPWRAVGIVLTVANWVCFLAVSFLR--KGSAIDQFGAERCVFYFEEISSNFKWVLQLINHVLFSLFFAWPLVKHMRAMERANMDTV---------------------------------------AGTVARS--GFFSVLLYLLRRHRTSSRGVAVYERLVRRAVVPMVVSSVFTLVVTILNVIDFQAPDLDIPITSLSILDNGLTLGSICFANGGATAAYER 301          
BLAST of jgi.p|Trimin1|347662 vs. uniprot
Match: A0A836CG65_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG65_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.970e-23
Identity = 64/170 (37.65%), Postives = 89/170 (52.35%), Query Frame = 0
Query:   22 AVETGWFFGMR-LVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPH-PSRCQEFIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRMLRKA 189
            A   G FF  +  + G RN +  T  LA+L   +Y   EL Y++  +  Q  +C    A+ +LR  SN+LAFLHLFLRA+  NS+NP W  WRR GIALTV+   +L +  A R  + T  P    +RC      +  TL W  QL+CH+A           HM  L+++
Sbjct:   41 AAMAGCFFAEKAFMLGKRNTITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALR--RITLIPTKLGARCSAQYESVSFTLMWVSQLVCHVAXXXXXXXXXXRHMNELKQS 208          
BLAST of jgi.p|Trimin1|347662 vs. uniprot
Match: A0A835Z0Y4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Y4_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.120e-19
Identity = 68/204 (33.33%), Postives = 103/204 (50.49%), Query Frame = 0
Query:    1 MSHATFDDLFTTSCLSVSCTIAVETGWFFGMRLVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRML---RKAGLAQHPPHAVER 201
            M+   F  L   + L V   I+++T   FG R  +  R  M ++ FLAS     Y  ++  Y+F  +       +      IL+GA NS+AFLHLF RA+A+N+LNP+W   R   + L +    VL  V   R  K   + P  +RC      +   +K+ +QL+ H+  + FF+WPL+ H+R+L   R+AGL      AV R
Sbjct:    1 MALTAFKCLLEMAALGVLFCISLQTTLVFGNRYFFYRRVWMNFSAFLASALALTYAAYKTGYWFAGLGPYYDCQSVLMVAGILQGACNSMAFLHLFQRADAINALNPRWRYLRIFALFLVIANWAVLGGVVVDRKFKEV-NGPDGTRCLFIPGLVVFRVKFLVQLVNHVVQSAFFVWPLIVHIRLLDKGRRAGLGTSSSVAVYR 203          
BLAST of jgi.p|Trimin1|347662 vs. uniprot
Match: A0A836CF01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF01_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 5.260e-16
Identity = 63/188 (33.51%), Postives = 91/188 (48.40%), Query Frame = 0
Query:    7 DDLFTTSCLSVSCTIAVETGWFFGMR-LVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRMLRKAGLAQ 193
            D + +++   V+   A  T  FF  R LV   RNA+  T   A+  +++  V +L Y+ +      + C    A+ I+R  S++LAFLHLFLRANA           R  G  L +  + +L LV +     P        RC     P+   L W  QL  H+ FAG F+WPLL H+R +R  GLA+
Sbjct:    4 DPMVSSAFFGVTSVTASLTLCFFAERTLVMRKRNAITVTALAAAFLSSLNTVWQLAYFHLGKMTDLSICKIGYAWGIMRTTSSALAFLHLFLRANAAXXXXXXXXXXRAFGALLLLANVLLLVLVPSLWLLTPKRYDTG-VRCVVIFPPVTFLLMWAAQLASHVVFAGLFVWPLLSHVRAMRGTGLAR 190          
BLAST of jgi.p|Trimin1|347662 vs. uniprot
Match: A0A835ZCN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN3_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.870e-14
Identity = 68/213 (31.92%), Postives = 96/213 (45.07%), Query Frame = 0
Query:   13 SCLSVSCTIAVETGWFFGMRLVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQLICHIAF---------------------AGFFIWPLLGHMRML---RKAGLAQHPPHAVER 201
            + L +  TI+++T  FFG R     R  M  + FLAS    IY  ++L Y+F  +    +         I++GA NS+AFLHLFLRA+A+NSLN KW   R  G+ L       L  V   R  K    P   +RC      +P T+   +    HI+                      + FF+WPL  H+R++   RKAGL      A+ R
Sbjct:    8 AALGMLLTISLQTTVFFGHRYFSYRRVWMNLSAFLASALGLIYAAYKLGYWFAGIGAFFSCRNVMMVGGIVQGACNSMAFLHLFLRADAINSLNSKWRYLRVVGMVLVAANWAALGAVIVDRTYKEVQGPDR-TRCLF----VPGTVVLRVNHTHHISNRPPGVSLIEVRLFPLLPVGVQSAFFVWPLTVHIRLMDKGRKAGLGTSATCAIYR 215          
BLAST of jgi.p|Trimin1|347662 vs. uniprot
Match: A0A835ZKC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKC7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 7.360e-9
Identity = 55/165 (33.33%), Postives = 78/165 (47.27%), Query Frame = 0
Query:    1 MSHAT-FDDLFTTSCLSVSCTIAVETGWFFGMRLVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQ 164
            MSHAT F        LSV+  + ++T   FG R     +  +  TG LAS+ T  +    +  +F  +   +    Q      L  +SN+LAF+HLFL+A+A N LNP+WP WR A I   V    +L +V A    K     P+P+   E      A  KWT +
Sbjct:    1 MSHATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCL-SSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEA---PNPNLGGE------ARCKWTFE 155          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347662 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835Z9W2_9STRA7.310e-280100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z8K2_9STRA3.810e-8653.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIT3_9STRA4.820e-8348.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9N7_9STRA1.770e-4839.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0T7_9STRA3.270e-3734.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CG65_9STRA5.970e-2337.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0Y4_9STRA1.120e-1933.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CF01_9STRA5.260e-1633.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCN3_9STRA1.870e-1431.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZKC7_9STRA7.360e-933.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_14contigContig_14:1005510..1011741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347662mRNA_3236Tribonema minus UTEX_B_3156 mRNAContig_14 1005510..1011879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347662|estExt_Genemark1.C_Ctg_140105 ID=Trimin1|347662|estExt_Genemark1.C_Ctg_140105|Name=jgi.p|Trimin1|347662|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=403bp
MSHATFDDLFTTSCLSVSCTIAVETGWFFGMRLVYGVRNAMAWTGFLASL
FTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRAN
AVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQE
FIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRMLRKAGLAQHPPHAVE
RCCGGCAWWCSCSSERSRRRSSSSAQEDGDAPGSGTPAETPTGFTTPRHD
TVYRQLVLRAVVSVAASALFTVVAAVLVMLDVYGVVDGIPVVGLSILDNG
FTLGSIFFANSGGLGPHDRRPSRQQRRRSAQQRHTMSISKRPSMLLQTVL
APAHRPPAAADALWRRIGGDAGEAHIVMPRVSPPPLPAAPVEREQTVVCG
GL*
back to top