Trimin1|347660|estExt_Genemark1.C_Ctg_140103 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|347660
Unique Name	Trimin1\|347660\|estExt_Genemark1.C_Ctg_140103
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	277

Homology

[Close]

BLAST of jgi.p|Trimin1|347660 vs. uniprot
Match: A0A835ZAZ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ0_9STRA)

HSP 1 Score: 436 bits (1121), Expect = 9.690e-153
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0

Query:    1 MEYAVMRMGKLKKKSQMLRVMQEKFYILTIQGQLLVHSSAGFKTVTTAPPLLFADAAVMTRDEPWVPYHAMKLVTQLTANTAAVAFAGYLQLQPLHGVNTSGHGWYMTPNGRMGLFEKISSSNVWTVQGMHEYDELLLLDHASRTQNQVQTLPPAAGKAGVPLAPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDVLAEDEGGEEEGDMRSLVSPRPPGVGGAAPFQAATLQQQQRPXXXXXSPRQEGRKALGGVELLIAGY 276
            MEYAVMRMGKLKKKSQMLRVMQEKFYILTIQGQLLVHSSAGFKTVTTAPPLLFADAAVMTRDEPWVPYHAMKLVTQLTANTAAVAFAGYLQLQPLHGVNTSGHGWYMTPNGRMGLFEKISSSNVWTVQGMHEYDELLLLDHASRTQNQVQTLPPAAGKAGVPLAPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDVLAEDEGGEEEGDMRSLVSPRPPGVGGAAPFQAATLQQQQRPXXXXXSPRQEGRKALGGVELLIAGY
Sbjct:    1 MEYAVMRMGKLKKKSQMLRVMQEKFYILTIQGQLLVHSSAGFKTVTTAPPLLFADAAVMTRDEPWVPYHAMKLVTQLTANTAAVAFAGYLQLQPLHGVNTSGHGWYMTPNGRMGLFEKISSSNVWTVQGMHEYDELLLLDHASRTQNQVQTLPPAAGKAGVPLAPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDVLAEDEGGEEEGDMRSLVSPRPPGVGGAAPFQAATLQQQQRPXXXXXSPRQEGRKALGGVELLIAGY 276

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347660 vs. uniprot

BLAST of jgi.p|Trimin1|347660 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZAZ0_9STRA	9.690e-153	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..261

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_14	contig	Contig_14:970947..976568 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347660	mRNA_3234	Tribonema minus UTEX_B_3156	mRNA	Contig_14 970947..976568 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|347660|estExt_Genemark1.C_Ctg_140103 ID=Trimin1|347660|estExt_Genemark1.C_Ctg_140103|Name=jgi.p|Trimin1|347660|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=277bp
MEYAVMRMGKLKKKSQMLRVMQEKFYILTIQGQLLVHSSAGFKTVTTAPP
LLFADAAVMTRDEPWVPYHAMKLVTQLTANTAAVAFAGYLQLQPLHGVNT
SGHGWYMTPNGRMGLFEKISSSNVWTVQGMHEYDELLLLDHASRTQNQVQ
TLPPAAGKAGVPLAPSPTATSATASTPTQSNAAATPLSASARSAARRSPA
AAAAAAQIDVLAEDEGGEEEGDMRSLVSPRPPGVGGAAPFQAATLQQQQR
PQQQQQSPRQEGRKALGGVELLIAGY*