Trimin1|176623|e_gw1.139.41.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|176623
Unique NameTrimin1|176623|e_gw1.139.41.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length69
Homology
BLAST of jgi.p|Trimin1|176623 vs. uniprot
Match: A0A835Z9A7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A7_9STRA)

HSP 1 Score: 129 bits (324), Expect = 6.190e-38
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
Query:    1 MSIVGGEGLPAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEMENASSALVPGS 68
            +SIVGGEG PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEMENASSALVPGS
Sbjct:    2 VSIVGGEGPPAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEMENASSALVPGS 69          
BLAST of jgi.p|Trimin1|176623 vs. uniprot
Match: A0A6H5KN32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN32_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.230e-8
Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 0
Query:   10 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEMENASSALVPGS 68
            P  +ALHSGR+GGAT +   G S  +I +AGRWKS  F TY+R   +  N  S  +  S
Sbjct:   59 PTHFALHSGRIGGATQLAKQGASVVQIQRAGRWKSGAFMTYVRAGGDGANCVSRALASS 117          
BLAST of jgi.p|Trimin1|176623 vs. uniprot
Match: A0A6H5K8A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A0_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.990e-7
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0
Query:   10 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPE 56
            P +YALHSGR+GGAT +   G S  +I +AGRWKS+ F  Y+R   E
Sbjct:  146 PQKYALHSGRIGGATHLASMGASVIQIQRAGRWKSSAFMVYVRAGGE 192          
BLAST of jgi.p|Trimin1|176623 vs. uniprot
Match: A0A6H5KZQ1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZQ1_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.780e-6
Identity = 24/50 (48.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query:   10 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEMEN 59
            P  +ALHSGR+GGAT +   G S  +I + GRWKS    TY+R   E  N
Sbjct:  282 PTHFALHSGRIGGATQLAKQGASGVQIQRVGRWKSGAIMTYVRAGGEGAN 331          
BLAST of jgi.p|Trimin1|176623 vs. uniprot
Match: A0A662XNI5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XNI5_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.100e-6
Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 0
Query:   10 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEM-ENASSALVPGS 68
            P +++ HS R+GGA A+M AG+SD  I   GRW S  F  Y RL P M  +A+S+++  S
Sbjct:  209 PNDFSCHSLRIGGACALMAAGKSDLVIRLMGRWSSWCFSVYTRLKPGMVRDAASSMIKAS 268          
BLAST of jgi.p|Trimin1|176623 vs. uniprot
Match: W2PKW8_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PKW8_PHYPN)

HSP 1 Score: 50.4 bits (119), Expect = 4.540e-6
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   10 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEM-ENASSALVPGS 68
            P +Y+ HS R+GGA A++ AG+SD  I   GRW S  F  Y RL P M  + +S+++  S
Sbjct:   56 PKDYSSHSLRIGGACALLAAGKSDLVIRLMGRWSSWCFIVYTRLKPGMIRDVASSMIKAS 115          
BLAST of jgi.p|Trimin1|176623 vs. uniprot
Match: A0A6G0NHZ3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NHZ3_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 4.590e-6
Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    8 GLP-AEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEM-ENASSALVPGS 68
            GLP ++Y+ HS R+GGA A++ AG+SD  I   GRW S  F  Y RL P M  +A+S ++  S
Sbjct:  235 GLPRSDYSTHSLRIGGACALLAAGKSDLAIRLLGRWASWCFTVYTRLRPGMIRDAASCMIKAS 297          
BLAST of jgi.p|Trimin1|176623 vs. uniprot
Match: W2PLJ7_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PLJ7_PHYPN)

HSP 1 Score: 52.0 bits (123), Expect = 4.800e-6
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   10 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEM-ENASSALVPGS 68
            P +Y+ HS R+GGA A++ AG+SD  I   GRW S  F  Y RL P M  + +S+++  S
Sbjct:  697 PKDYSSHSLRIGGACALLAAGKSDLVIRLMGRWSSRCFTVYTRLKPGMIRDVASSMIKAS 756          
BLAST of jgi.p|Trimin1|176623 vs. uniprot
Match: W2QZY1_PHYPN (Uncharacterized protein n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QZY1_PHYPN)

HSP 1 Score: 52.0 bits (123), Expect = 4.850e-6
Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 0
Query:   10 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEM-ENASSALVPGS 68
            P +Y+ HS R+GGA A++ AG+SD  I   GRW S  F  Y RL P +  +A+S+++  S
Sbjct: 1101 PKDYSAHSLRIGGACALLAAGKSDLVIRLMGRWSSWCFTVYTRLKPAIIRDAASSMIKAS 1160          
BLAST of jgi.p|Trimin1|176623 vs. uniprot
Match: A0A6A3TFJ2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3TFJ2_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 5.470e-6
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    6 GEGLPA-EYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPE 56
            G GLP  +Y+ HS R+GGA A++ AG+SD  I   GRW S  F  Y +L PE
Sbjct:   43 GVGLPRPDYSTHSLRIGGACALLTAGKSDLGIRLLGRWASWCFTVYTKLRPE 94          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176623 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A835Z9A7_9STRA6.190e-3897.06Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A6H5KN32_9PHAE1.230e-845.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8A0_9PHAE1.990e-753.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZQ1_9PHAE1.780e-648.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A662XNI5_9STRA3.100e-645.00Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
W2PKW8_PHYPN4.540e-643.33Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A6G0NHZ3_9STRA4.590e-646.03Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
W2PLJ7_PHYPN4.800e-643.33Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
W2QZY1_PHYPN4.850e-643.33Uncharacterized protein n=5 Tax=Phytophthora paras... [more]
A0A6A3TFJ2_9STRA5.470e-650.00Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10Intergrase catalytic corecoord: 3..53
e-value: 1.6E-8
score: 36.5
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 8..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_139contigContig_139:30741..30947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176623mRNA_16716Tribonema minus UTEX_B_3156 mRNAContig_139 30741..30947 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|176623|e_gw1.139.41.1 ID=Trimin1|176623|e_gw1.139.41.1|Name=jgi.p|Trimin1|176623|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=69bp
MSIVGGEGLPAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTY
IRLSPEMENASSALVPGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR011010DNA_brk_join_enz