mRNA_16715 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|176594
Unique NamemRNA_16715
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A835ZEC2_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC2_9STRA)

HSP 1 Score: 767 bits (1981), Expect = 1.930e-280
Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 1
Query:    1 VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASLAAIII 1128
            VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASLAAIII
Sbjct:    1 VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASLAAIII 376          
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A835YY51_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY51_9STRA)

HSP 1 Score: 469 bits (1207), Expect = 4.800e-162
Identity = 248/393 (63.10%), Postives = 285/393 (72.52%), Query Frame = 1
Query:    7 SGGTDTCAILNDSTVKCWGHGAWGQLGQGS----LEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGST------------TDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQG---NTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASLAAIII 1128
            +G +  CA+L+DSTVKCWG G  GQLGQGS      DL SPPRS +NLG GRTA+AIA G+  TC LL   TVKCWG  D G+LGQG++             DLS+PP SA NLG  R AKAIA G  HTCALLDD+T+KCWG G  GQLGQG   ++  L+SPP  AINLG GRTAKAIA G  HTCALLD STVKCWG G  GQLG  ++  L+SPA+ AINLG GR AKAIA G   TC +LDD TVKCWG G YGQLGQG   D +  PP+SAINLG GRTAKAIAT  +H CA+LDDSTVKCWG+GD+G+ G G+ A LSSPP+  + LGS RTA AI+AG   TCALLDDST+KC G G   QLGQGSTAN+GD+P EMASL AI++
Sbjct:   21 TGDSHACALLDDSTVKCWGSGYNGQLGQGSSGSSAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDADLSTPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGESDSSAQLNSPPRRAINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLLTSPASTAINLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTD-LFLPPISAINLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNNAELSSPPIRVVDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGSTANVGDKPHEMASLPAIVL 412          
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO)

HSP 1 Score: 331 bits (848), Expect = 7.980e-107
Identity = 189/399 (47.37%), Postives = 231/399 (57.89%), Query Frame = 1
Query:   22 TCAILNDSTVKCWGHGAWGQLGQGSLE------DLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSS------ATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSS------AINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANE------AINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSP-----PVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPP------VSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASL 1113
            TC +L++  +KCWG    GQLG G           +      V LG GRTA AI+ G   TC LL + ++KCWG  + G+LG G T+     P        A  LG GR A AI+ G  HTCALLD+ ++KCWG  A GQLG G+T+D    P        AI LG GRTA AI+ GGYHTCALLD+ ++KCWGY A GQLGL    S      E      AI LG GR AKAI+ G   TCA+LD+ +VKCWG    GQLG G T      P      + A+ LG GRTA AI+ GY HTCALLD+  VKCWG    GQLG G T++  + P      + AI LG+ RTA AI AG  HTCALLD+ +VKCWG+    QLG G+T++ GD P EM  +
Sbjct:   54 TCVLLDNGYIKCWGANGAGQLGLGDTSYRGDDRGEMGNRLPAVALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVKCWGANGNGQLGLGDTSYRSDGPGEMGDTLPAVVLGTGRTATAISAGYYHTCALLDNGYVKCWGYNSDGQLGLGDTSYRGNGPGEMGDTLPAITLGTGRTAMAIFAGGYHTCALLDNGSVKCWGYNGNGQLGLGNTSDRGDGPGEMGDM 452          
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A3T0RSR7_9PROT (Uncharacterized protein n=1 Tax=Bdellovibrio sp. qaytius TaxID=1916293 RepID=A0A3T0RSR7_9PROT)

HSP 1 Score: 338 bits (867), Expect = 4.430e-105
Identity = 200/423 (47.28%), Postives = 254/423 (60.05%), Query Frame = 1
Query:    1 VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDL------LSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTD----------------LSSPPSSAT---NLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSS------AINLGLGRTAKAIATG-GYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANE------AINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQG-STPDDVSS---PPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSS------PPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMA-SLAAI 1122
            + +G T TCA+L++STVKCWG   +GQLGQG +  L      +      ++LG GRTA AI+ G   TC +L D T+KCWG+G  G+LG G+ T+                L S  S  T   N    +K K ++ G  HTCA++D+ ++KCWG   EGQLGQG+T  L            AINLG GRTA  I+     HTCALLD++TVKCWG  +SGQLG    ++L   A E      AINLG  R A AIATG   +CA+LD++TVKCWGY +YGQLGQG ST   V +     +++INLG  RTA AI++G NHTCALLD+S VKCWG+   G+LGQG T  L          +  ++LG+ RTA  I+A   HTCALLD++TVKCWG     QLGQG T +LGD   EM  SL AI
Sbjct:  342 ITAGLTHTCALLDNSTVKCWGDNTYGQLGQGHVNKLGDGSGEMGDSLPAIDLGTGRTAVAISAGEVQTCAILDDSTLKCWGRGSLGQLGYGNGTNYGDGANEMGDFLLKVKLGSSTSRLTKVLNKNIKQKYKPVSMGAYHTCAIIDNGSVKCWGRNTEGQLGQGHTNSLGDGAGEMGDNLPAINLGTGRTATQISVSYDKHTCALLDNATVKCWGKNSSGQLGQEHANNLGDDAGEMGDSLPAINLGASRTATAIATGEQHSCALLDNSTVKCWGYNFYGQLGQGNSTTKGVGAGEMASLTSINLGTSRTAIAISSGRNHTCALLDNSQVKCWGENTDGELGQGHTNSLGDGAGEMGDSLPEVNLGTGRTAVQISASGNHTCALLDNATVKCWGLNSSGQLGQGHTNSLGDGAGEMGNSLPAI 764          
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A836C7U3_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7U3_9STRA)

HSP 1 Score: 327 bits (838), Expect = 3.390e-104
Identity = 170/247 (68.83%), Postives = 192/247 (77.73%), Query Frame = 1
Query:  334 GEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGST 1074
            G +HTCA+LDDAT KCWG G  GQLGQG+   LSSPP SAINLG GRTAKAIA G  HTCALLD++TVKCWG+G +GQLGL    +L+SP+ +AINLGLGR AKAIATG   TCA+LDD+TVKCWG  Y GQLGQG+T DD+  PP SAINLG  RTA AIA G  HTCALLD++TVKC   G  GQLGQGSTA+L SPP S I+LGS RTA AIA G  HTCALLD+STVKCWG      LGQG++
Sbjct:  266 GSQHTCAILDDATAKCWGDGHHGQLGQGDWLSLSSPPKSAINLGSGRTAKAIAAGVGHTCALLDNATVKCWGFGENGQLGLGDDVALNSPSIDAINLGLGRTAKAIATGFFHTCALLDDSTVKCWGNNYSGQLGQGTT-DDLILPPKSAINLGSSRTATAIAAGREHTCALLDNATVKCGDYGADGQLGQGSTANLHSPPKSVINLGSGRTATAIATGNYHTCALLDNSTVKCWG------LGQGTS 505          
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A3R7XU94_9FLAO (Uncharacterized protein (Fragment) n=2 Tax=cellular organisms TaxID=131567 RepID=A0A3R7XU94_9FLAO)

HSP 1 Score: 340 bits (871), Expect = 1.160e-101
Identity = 168/356 (47.19%), Postives = 241/356 (67.70%), Query Frame = 1
Query:   22 TCAILNDSTVKCWGHGAWGQLGQGSL--EDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQG-STTDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSS-PANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTA-HLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGST 1074
            TCAIL++  +KCWG+   GQLG G    ++L +P  + ++LG GRTA A+A G   TC +L +  +KCWG  ++G+LG G S T+ ++P S+A +LG GR A A+A G  H CA+LD+  +KCWG   +GQLG G  T+L++P S+A+NLG GRTA A++TG  HTCA+LD+  +KCWG+ + GQLG    +++++ P++ AINLG GR A A+ATG   TCAILD+  VKCWG   YGQLG G +  + ++P  + ++LG GRTA A+  G  ++CA+LD+   KCWG   +GQLG G +A ++++P  +AI LG+ RTA A+  G  H CA+LD+   KCWG   + QLG G +
Sbjct: 1324 TCAILDNGDLKCWGYDGAGQLGDGGSVWQNLNAPSSTPIDLGTGRTAVAVAAGHYHTCAILDNGDLKCWGYDNYGQLGDGGSNTNTNAPSSTAIDLGTGRTAVAVAAGGYHACAILDNGDLKCWGYNDKGQLGDGTNTELNAPSSTAVNLGTGRTAVAVSTGSSHTCAILDNGDLKCWGFDSGGQLGDGGSNTMTNAPSSTAINLGTGRTAVAVATGQDHTCAILDNGDVKCWGLDNYGQLGDGGSNANTNAPSSTPVDLGTGRTAVAVGIGDAYSCAILDNGETKCWGDDVYGQLGDGGSATNINAPSSTAIDLGTGRTAVALGGGKYHVCAILDNGETKCWGRDNYGQLGDGGS 1679          
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: UPI001C3E53F1 (DUF11 domain-containing protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3E53F1)

HSP 1 Score: 323 bits (829), Expect = 2.060e-101
Identity = 175/389 (44.99%), Postives = 233/389 (59.90%), Query Frame = 1
Query:    7 SGGTDTCAILNDSTVKCWGHGAWGQLGQGS-LEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPP-SSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSS-------PPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLG----LHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSP----PVSA--IHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASLA 1116
            +G   TCA+L D TV+CWG G  G+LG G+ +  L +     VNLG GRTARA+A G   TC +L D TV+CWG G +GRLG GST +++SP  +    LGPGR+A AI  G  HTCA+LDD T++CWG G+ G++G G    +         PP   +++G GR A AIA G +HTC + D   + CWG+G  GQLG        D  +  A   +NL  GR  +A+A GT  TC +LDD + +CWG+G  G+LG G   D  S+     I LG GRTA  I+ G  H+CA+LD   V+CWG G  G+LG GST  ++      P SA  + LG+ R A AI+ G  HTCALLDD T++CWGFG   +LG G+  ++GD P+   + A
Sbjct:   38 AGEEHTCAVLADRTVRCWGRGLAGRLGYGNEVNQLSAGGGGPVNLGPGRTARAVAAGDYHTCAILDDATVRCWGFGANGRLGYGSTVNVTSPAFAPPVPLGPGRRAMAITAGSAHTCAILDDGTVRCWGAGSSGRMGLGTQASIGDDEVPGAVPP---VDIGAGRRAVAIAAGDFHTCVIRDDGALVCWGFGQGGQLGHGGTADIGDDETPAAAGPVNLN-GRRVRAVAGGTAHTCVVLDDGSARCWGFGGDGRLGYGGRADIPSAASAGPIALGPGRTAVGISAGEAHSCAILDTGAVRCWGFGGNGRLGYGSTDAIADEAGETPASAGPVALGAGRVAHAISLGFSHTCALLDDGTLRCWGFGGSGRLGYGNETSVGDSPSRGVAAA 422          
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A519CXF3_9EURY (Uncharacterized protein n=2 Tax=Archaea TaxID=2157 RepID=A0A519CXF3_9EURY)

HSP 1 Score: 332 bits (851), Expect = 3.360e-101
Identity = 176/371 (47.44%), Postives = 242/371 (65.23%), Query Frame = 1
Query:    1 VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASL 1113
            + SG + TC IL+D +V CWGH  +GQLG G+  +  +P ++  +LG+GRTA AI+ G   TC +L D +V CWG   +G+LG  +T    + PS  ++LG GR A AI++G  HTCA+LDD T+ CWG    G LG G TT  ++P  ++ +LG GRTA AI++GGYHTCA+LD  +V CWG    GQLG  S    S+ + +  +LG+ R A AI++G   TC ILD+ +V CWGY + GQLG G+T D  +S   S+  LG GRTA AI++G  HTCA+LDD +V CWG  + GQLG G+T   ++P  ++  LG+ RTA AI++G+ HTCALLDD TV CWG+  +  LG G+T    + PT  +SL
Sbjct:  460 ISSGQSHTCIILDDGSVSCWGHNYFGQLGDGTTTNRNTPTQTS-SLGIGRTAVAISSGYYHTCAILDDGSVSCWGDNRYGQLGDETTITNRNTPSQTSSLGTGRTAIAISSGSSHTCAILDDGTVSCWGYNGYGGLGDGTTTQRNTPTQTS-SLGTGRTAVAISSGGYHTCAILDDGSVSCWGDNRYGQLGDGSTTD-SNISTQTSSLGINRGAVAISSGQSHTCIILDNGSVSCWGYNWNGQLGDGTTTDKNTSTQTSS--LGTGRTAVAISSGAYHTCAILDDGSVSCWGWNNGGQLGDGTTTQRNTPTQTSS-LGNGRTAVAISSGSRHTCALLDDGTVSCWGYNGYGGLGDGTTTQR-NTPTPTSSL 823          
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A4Q6AL42_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6AL42_9PROT)

HSP 1 Score: 317 bits (812), Expect = 4.090e-101
Identity = 163/362 (45.03%), Postives = 225/362 (62.15%), Query Frame = 1
Query:    1 VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLE------DLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQG 1068
            V SGG+ +CA+L+D++V CWG+    +LG G         D   PP   + LG G+TA+A+A+    +C +L D ++KCWG+   G+LG G T    +P +++ NLG  RKA +I+ G  HTCA+LDD+T+KCWG  + GQLG G+  +   PPS+ INLG GR AK+++ G YHTCALLD STVKCWG  A+GQLG       S+PA   INLG G  A  IA G    CA   D  +KCWG    GQLG G   D +  P  S I++G  R   +++ G +HTC L+DDS+++CWG  + GQLG G      +PP +AI+ G++   K+++AG  H C +LDD+T+KCWG   + QLG G
Sbjct:  123 VSSGGSHSCAVLDDASVACWGYNYAQELGYGDTNKYGEGIDRYMPPSFPIILGAGKTAKAVAVNYSHSCAILNDDSIKCWGQNASGQLGYGDTIRRGTPAATSINLGLNRKAVSISAGFAHTCAVLDDSTVKCWGANSAGQLGYGDYQNRLLPPSTPINLGNGRLAKSLSLGAYHTCALLDDSTVKCWGNNANGQLGYGDKTIRSAPALLPINLGSGVKAVDIAAGAYHNCAATSDGNLKCWGRNKNGQLGYGDINDRLL-PDSSFIDIGA-RGVVSVSAGLSHTCTLMDDSSLQCWGGNEEGQLGYGDLIERHTPPQTAINFGASLV-KSLSAGRLHNCVILDDATLKCWGSNSYGQLGGG 481          
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: UPI001C3C70E5 (DUF11 domain-containing protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3C70E5)

HSP 1 Score: 319 bits (818), Expect = 8.880e-100
Identity = 170/387 (43.93%), Postives = 234/387 (60.47%), Query Frame = 1
Query:   10 GGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDLLS----PPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSS-ATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTT---DLSSPPSSAI-NLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSP----ANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSP------PVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASL 1113
            G   TCA++ D +V+CWG G  G+LG G  +++LS    PP   V+LG GRT RAIA G   TC ++ D +V+CWG G +GRLG G T D+ SP ++ A ++GPGR A+AI  G  HTC + DD  + CWG G  G+LG GN     D  SP S+ + +LG GRTA AI+ G +HTCA+ D  ++ CWG+G+ GQLG      +       A   +NL  GR A+A+A G   TC +LDD + +CWG+G  G+LG G+  + + +     I+LG GR+A AIA G  HTCA+LD   V+CWG G  G+LG G+T  +          V  + LG  R A+A++ G  HTCA LDD T++CWGFG   +LG G  A++GD P    ++
Sbjct:   49 GDEHTCAVVGDRSVRCWGRGLAGRLGYGGEQNILSAAAAPP---VDLGPGRTVRAIAAGDFHTCAIVDDGSVRCWGFGANGRLGYGGTGDVRSPATAPAVDIGPGRTARAITVGASHTCVIRDDGAVVCWGNGVSGRLGYGNQASIGDNESPASAGVVDLGPGRTAVAISAGDFHTCAIRDDGSLLCWGFGSGGQLGKGGTSDIGDDETPGAAGPVNLN-GRRARAVAGGKGHTCVVLDDGSARCWGFGADGRLGYGNAANILDAAAAPPIDLGPGRSAIAIAAGEAHTCAILDTEAVRCWGFGGNGRLGYGTTDSIGDQVGETPGTVGPVALGPGRVARALSVGYSHTCAALDDGTLRCWGFGGSGRLGYGGEASVGDSPARSVAV 431          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEC2_9STRA1.930e-280100.00Regulator of chromosome condensation 1/beta-lactam... [more]
A0A835YY51_9STRA4.800e-16263.10Regulator of chromosome condensation 1/beta-lactam... [more]
A0A835T669_9CHLO7.980e-10747.37Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A3T0RSR7_9PROT4.430e-10547.28Uncharacterized protein n=1 Tax=Bdellovibrio sp. q... [more]
A0A836C7U3_9STRA3.390e-10468.83Regulator of chromosome condensation 1/beta-lactam... [more]
A0A3R7XU94_9FLAO1.160e-10147.19Uncharacterized protein (Fragment) n=2 Tax=cellula... [more]
UPI001C3E53F12.060e-10144.99DUF11 domain-containing protein n=1 Tax=Miltoncost... [more]
A0A519CXF3_9EURY3.360e-10147.44Uncharacterized protein n=2 Tax=Archaea TaxID=2157... [more]
A0A4Q6AL42_9PROT4.090e-10145.03Uncharacterized protein (Fragment) n=1 Tax=Proteob... [more]
UPI001C3C70E58.880e-10043.93DUF11 domain-containing protein n=1 Tax=Miltoncost... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_139contigContig_139:20213..21343 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|176594|e_gw1.139.19.1
DescriptionRegulator of chromosome condensation (RCC1) repeat
COG categoryM
Max annot lvl201174|Actinobacteria
EggNOG OGsCOG5184@1|root,COG5184@2|Bacteria,2IDH9@201174|Actinobacteria
Evalue7.36e-105
Seed ortholog1313172.YM304_10020
Hectar predicted targeting categoryother localisation
TranscriptId176916
TrackFilteredModels1
ProteinId176594
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176594gene_16715Tribonema minus UTEX_B_3156 geneContig_139 20213..21343 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16715_1exon_16715_1Tribonema minus UTEX_B_3156 exonContig_139 20213..21343 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16715CDS_16715Tribonema minus UTEX_B_3156 CDSContig_139 20213..21343 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176594Trimin1|176594|e_gw1.139.19.1Tribonema minus UTEX_B_3156 polypeptideContig_139 20213..21343 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16715 ID=mRNA_16715|Name=jgi.p|Trimin1|176594|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1131bp|location=Sequence derived from alignment at Contig_139:20213..21343- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTGTTTTCAGGCGGAACTGACACGTGCGCCATTCTAAATGACTCCACCGT
CAAGTGCTGGGGCCATGGAGCTTGGGGTCAGCTGGGGCAGGGCAGCCTTG
AAGATCTCCTGTCGCCACCACGCAGCGTTGTCAACCTAGGGTTGGGCAGA
ACGGCGAGAGCCATTGCCATAGGTCTTGAAGACACATGCACTTTACTAGT
TGACTTCACGGTCAAGTGCTGGGGTAAAGGAGATCATGGTCGGCTGGGGC
AGGGCAGCACTACTGACCTCAGCTCACCCCCAAGCAGCGCCACCAACCTG
GGGCCAGGCAGGAAGGCAAAAGCCATTGCCACAGGGGAAGAACACACATG
CGCCCTTTTAGATGATGCCACCATCAAGTGCTGGGGCGGCGGCGCCGAAG
GTCAGCTGGGGCAGGGCAACACTACTGACCTCAGCTCGCCCCCAAGCAGC
GCCATCAACCTGGGGTTGGGCAGAACAGCAAAAGCCATCGCCACGGGTGG
CTATCACACGTGTGCACTTCTGGATCACTCTACTGTCAAGTGCTGGGGCT
ACGGAGCTTCGGGTCAGCTGGGGCTGCATAGCCATGATAGCCTCTCCTCT
CCCGCAAACGAAGCCATCAACCTTGGGTTGGGCAGAATGGCAAAAGCCAT
TGCCACAGGTACTATTTTCACGTGCGCCATCCTAGATGATGCCACAGTCA
AGTGCTGGGGCTACGGCTACTATGGTCAGCTGGGGCAAGGCAGTACTCCT
GATGACGTCAGCTCGCCCCCAGTCAGCGCCATCAACCTGGGGTTGGGCAG
AACAGCAAAAGCCATCGCCACAGGTTATAATCACACTTGCGCCCTTCTAG
ATGATTCCACGGTCAAGTGCTGGGGCAAGGGGGACTTTGGTCAGCTGGGG
CAGGGCAGCACTGCTCACCTCAGCTCGCCTCCAGTCAGCGCTATCCATCT
GGGGTCGAACAGGACGGCAAAAGCCATCGCCGCAGGTGCCGAACACACTT
GTGCCCTTCTGGATGATTCAACTGTCAAATGCTGGGGCTTTGGATTCTTC
AGCCAGCTAGGGCAGGGCAGCACTGCTAACCTCGGCGATCAACCGACCGA
GATGGCCTCTCTTGCAGCAATCATCATTTGA
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protein sequence of jgi.p|Trimin1|176594

>Trimin1|176594|e_gw1.139.19.1 ID=Trimin1|176594|e_gw1.139.19.1|Name=jgi.p|Trimin1|176594|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=377bp
VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDLLSPPRSVVNLGLGR
TARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSSATNL
GPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSS
AINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSS
PANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTP
DDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLG
QGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFF
SQLGQGSTANLGDQPTEMASLAAIII*
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mRNA from alignment at Contig_139:20213..21343-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16715 ID=mRNA_16715|Name=jgi.p|Trimin1|176594|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1131bp|location=Sequence derived from alignment at Contig_139:20213..21343- (Tribonema minus UTEX_B_3156 )
GTGTTTTCAGGCGGAACTGACACGTGCGCCATTCTAAATGACTCCACCGT CAAGTGCTGGGGCCATGGAGCTTGGGGTCAGCTGGGGCAGGGCAGCCTTG AAGATCTCCTGTCGCCACCACGCAGCGTTGTCAACCTAGGGTTGGGCAGA ACGGCGAGAGCCATTGCCATAGGTCTTGAAGACACATGCACTTTACTAGT TGACTTCACGGTCAAGTGCTGGGGTAAAGGAGATCATGGTCGGCTGGGGC AGGGCAGCACTACTGACCTCAGCTCACCCCCAAGCAGCGCCACCAACCTG GGGCCAGGCAGGAAGGCAAAAGCCATTGCCACAGGGGAAGAACACACATG CGCCCTTTTAGATGATGCCACCATCAAGTGCTGGGGCGGCGGCGCCGAAG GTCAGCTGGGGCAGGGCAACACTACTGACCTCAGCTCGCCCCCAAGCAGC GCCATCAACCTGGGGTTGGGCAGAACAGCAAAAGCCATCGCCACGGGTGG CTATCACACGTGTGCACTTCTGGATCACTCTACTGTCAAGTGCTGGGGCT ACGGAGCTTCGGGTCAGCTGGGGCTGCATAGCCATGATAGCCTCTCCTCT CCCGCAAACGAAGCCATCAACCTTGGGTTGGGCAGAATGGCAAAAGCCAT TGCCACAGGTACTATTTTCACGTGCGCCATCCTAGATGATGCCACAGTCA AGTGCTGGGGCTACGGCTACTATGGTCAGCTGGGGCAAGGCAGTACTCCT GATGACGTCAGCTCGCCCCCAGTCAGCGCCATCAACCTGGGGTTGGGCAG AACAGCAAAAGCCATCGCCACAGGTTATAATCACACTTGCGCCCTTCTAG ATGATTCCACGGTCAAGTGCTGGGGCAAGGGGGACTTTGGTCAGCTGGGG CAGGGCAGCACTGCTCACCTCAGCTCGCCTCCAGTCAGCGCTATCCATCT GGGGTCGAACAGGACGGCAAAAGCCATCGCCGCAGGTGCCGAACACACTT GTGCCCTTCTGGATGATTCAACTGTCAAATGCTGGGGCTTTGGATTCTTC AGCCAGCTAGGGCAGGGCAGCACTGCTAACCTCGGCGATCAACCGACCGA GATGGCCTCTCTTGCAGCAATCATCATTTGA
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Coding sequence (CDS) from alignment at Contig_139:20213..21343-

>mRNA_16715 ID=mRNA_16715|Name=jgi.p|Trimin1|176594|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1131bp|location=Sequence derived from alignment at Contig_139:20213..21343- (Tribonema minus UTEX_B_3156 )
GTGTTTTCAGGCGGAACTGACACGTGCGCCATTCTAAATGACTCCACCGT
CAAGTGCTGGGGCCATGGAGCTTGGGGTCAGCTGGGGCAGGGCAGCCTTG
AAGATCTCCTGTCGCCACCACGCAGCGTTGTCAACCTAGGGTTGGGCAGA
ACGGCGAGAGCCATTGCCATAGGTCTTGAAGACACATGCACTTTACTAGT
TGACTTCACGGTCAAGTGCTGGGGTAAAGGAGATCATGGTCGGCTGGGGC
AGGGCAGCACTACTGACCTCAGCTCACCCCCAAGCAGCGCCACCAACCTG
GGGCCAGGCAGGAAGGCAAAAGCCATTGCCACAGGGGAAGAACACACATG
CGCCCTTTTAGATGATGCCACCATCAAGTGCTGGGGCGGCGGCGCCGAAG
GTCAGCTGGGGCAGGGCAACACTACTGACCTCAGCTCGCCCCCAAGCAGC
GCCATCAACCTGGGGTTGGGCAGAACAGCAAAAGCCATCGCCACGGGTGG
CTATCACACGTGTGCACTTCTGGATCACTCTACTGTCAAGTGCTGGGGCT
ACGGAGCTTCGGGTCAGCTGGGGCTGCATAGCCATGATAGCCTCTCCTCT
CCCGCAAACGAAGCCATCAACCTTGGGTTGGGCAGAATGGCAAAAGCCAT
TGCCACAGGTACTATTTTCACGTGCGCCATCCTAGATGATGCCACAGTCA
AGTGCTGGGGCTACGGCTACTATGGTCAGCTGGGGCAAGGCAGTACTCCT
GATGACGTCAGCTCGCCCCCAGTCAGCGCCATCAACCTGGGGTTGGGCAG
AACAGCAAAAGCCATCGCCACAGGTTATAATCACACTTGCGCCCTTCTAG
ATGATTCCACGGTCAAGTGCTGGGGCAAGGGGGACTTTGGTCAGCTGGGG
CAGGGCAGCACTGCTCACCTCAGCTCGCCTCCAGTCAGCGCTATCCATCT
GGGGTCGAACAGGACGGCAAAAGCCATCGCCGCAGGTGCCGAACACACTT
GTGCCCTTCTGGATGATTCAACTGTCAAATGCTGGGGCTTTGGATTCTTC
AGCCAGCTAGGGCAGGGCAGCACTGCTAACCTCGGCGATCAACCGACCGA
GATGGCCTCTCTTGCAGCAATCATCATTTGA
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