mRNA_16715 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A835ZEC2_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC2_9STRA) HSP 1 Score: 767 bits (1981), Expect = 1.930e-280 Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 1
Query: 1 VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASLAAIII 1128
VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASLAAIII
Sbjct: 1 VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASLAAIII 376
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A835YY51_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY51_9STRA) HSP 1 Score: 469 bits (1207), Expect = 4.800e-162 Identity = 248/393 (63.10%), Postives = 285/393 (72.52%), Query Frame = 1
Query: 7 SGGTDTCAILNDSTVKCWGHGAWGQLGQGS----LEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGST------------TDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQG---NTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASLAAIII 1128
+G + CA+L+DSTVKCWG G GQLGQGS DL SPPRS +NLG GRTA+AIA G+ TC LL TVKCWG D G+LGQG++ DLS+PP SA NLG R AKAIA G HTCALLDD+T+KCWG G GQLGQG ++ L+SPP AINLG GRTAKAIA G HTCALLD STVKCWG G GQLG ++ L+SPA+ AINLG GR AKAIA G TC +LDD TVKCWG G YGQLGQG D + PP+SAINLG GRTAKAIAT +H CA+LDDSTVKCWG+GD+G+ G G+ A LSSPP+ + LGS RTA AI+AG TCALLDDST+KC G G QLGQGSTAN+GD+P EMASL AI++
Sbjct: 21 TGDSHACALLDDSTVKCWGSGYNGQLGQGSSGSSAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDADLSTPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGESDSSAQLNSPPRRAINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLLTSPASTAINLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTD-LFLPPISAINLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNNAELSSPPIRVVDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGSTANVGDKPHEMASLPAIVL 412
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO) HSP 1 Score: 331 bits (848), Expect = 7.980e-107 Identity = 189/399 (47.37%), Postives = 231/399 (57.89%), Query Frame = 1
Query: 22 TCAILNDSTVKCWGHGAWGQLGQGSLE------DLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSS------ATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSS------AINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANE------AINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSP-----PVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPP------VSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASL 1113
TC +L++ +KCWG GQLG G + V LG GRTA AI+ G TC LL + ++KCWG + G+LG G T+ P A LG GR A AI+ G HTCALLD+ ++KCWG A GQLG G+T+D P AI LG GRTA AI+ GGYHTCALLD+ ++KCWGY A GQLGL S E AI LG GR AKAI+ G TCA+LD+ +VKCWG GQLG G T P + A+ LG GRTA AI+ GY HTCALLD+ VKCWG GQLG G T++ + P + AI LG+ RTA AI AG HTCALLD+ +VKCWG+ QLG G+T++ GD P EM +
Sbjct: 54 TCVLLDNGYIKCWGANGAGQLGLGDTSYRGDDRGEMGNRLPAVALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVKCWGANGNGQLGLGDTSYRSDGPGEMGDTLPAVVLGTGRTATAISAGYYHTCALLDNGYVKCWGYNSDGQLGLGDTSYRGNGPGEMGDTLPAITLGTGRTAMAIFAGGYHTCALLDNGSVKCWGYNGNGQLGLGNTSDRGDGPGEMGDM 452
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A3T0RSR7_9PROT (Uncharacterized protein n=1 Tax=Bdellovibrio sp. qaytius TaxID=1916293 RepID=A0A3T0RSR7_9PROT) HSP 1 Score: 338 bits (867), Expect = 4.430e-105 Identity = 200/423 (47.28%), Postives = 254/423 (60.05%), Query Frame = 1
Query: 1 VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDL------LSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTD----------------LSSPPSSAT---NLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSS------AINLGLGRTAKAIATG-GYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANE------AINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQG-STPDDVSS---PPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSS------PPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMA-SLAAI 1122
+ +G T TCA+L++STVKCWG +GQLGQG + L + ++LG GRTA AI+ G TC +L D T+KCWG+G G+LG G+ T+ L S S T N +K K ++ G HTCA++D+ ++KCWG EGQLGQG+T L AINLG GRTA I+ HTCALLD++TVKCWG +SGQLG ++L A E AINLG R A AIATG +CA+LD++TVKCWGY +YGQLGQG ST V + +++INLG RTA AI++G NHTCALLD+S VKCWG+ G+LGQG T L + ++LG+ RTA I+A HTCALLD++TVKCWG QLGQG T +LGD EM SL AI
Sbjct: 342 ITAGLTHTCALLDNSTVKCWGDNTYGQLGQGHVNKLGDGSGEMGDSLPAIDLGTGRTAVAISAGEVQTCAILDDSTLKCWGRGSLGQLGYGNGTNYGDGANEMGDFLLKVKLGSSTSRLTKVLNKNIKQKYKPVSMGAYHTCAIIDNGSVKCWGRNTEGQLGQGHTNSLGDGAGEMGDNLPAINLGTGRTATQISVSYDKHTCALLDNATVKCWGKNSSGQLGQEHANNLGDDAGEMGDSLPAINLGASRTATAIATGEQHSCALLDNSTVKCWGYNFYGQLGQGNSTTKGVGAGEMASLTSINLGTSRTAIAISSGRNHTCALLDNSQVKCWGENTDGELGQGHTNSLGDGAGEMGDSLPEVNLGTGRTAVQISASGNHTCALLDNATVKCWGLNSSGQLGQGHTNSLGDGAGEMGNSLPAI 764
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A836C7U3_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7U3_9STRA) HSP 1 Score: 327 bits (838), Expect = 3.390e-104 Identity = 170/247 (68.83%), Postives = 192/247 (77.73%), Query Frame = 1
Query: 334 GEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGST 1074
G +HTCA+LDDAT KCWG G GQLGQG+ LSSPP SAINLG GRTAKAIA G HTCALLD++TVKCWG+G +GQLGL +L+SP+ +AINLGLGR AKAIATG TCA+LDD+TVKCWG Y GQLGQG+T DD+ PP SAINLG RTA AIA G HTCALLD++TVKC G GQLGQGSTA+L SPP S I+LGS RTA AIA G HTCALLD+STVKCWG LGQG++
Sbjct: 266 GSQHTCAILDDATAKCWGDGHHGQLGQGDWLSLSSPPKSAINLGSGRTAKAIAAGVGHTCALLDNATVKCWGFGENGQLGLGDDVALNSPSIDAINLGLGRTAKAIATGFFHTCALLDDSTVKCWGNNYSGQLGQGTT-DDLILPPKSAINLGSSRTATAIAAGREHTCALLDNATVKCGDYGADGQLGQGSTANLHSPPKSVINLGSGRTATAIATGNYHTCALLDNSTVKCWG------LGQGTS 505
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A3R7XU94_9FLAO (Uncharacterized protein (Fragment) n=2 Tax=cellular organisms TaxID=131567 RepID=A0A3R7XU94_9FLAO) HSP 1 Score: 340 bits (871), Expect = 1.160e-101 Identity = 168/356 (47.19%), Postives = 241/356 (67.70%), Query Frame = 1
Query: 22 TCAILNDSTVKCWGHGAWGQLGQGSL--EDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQG-STTDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSS-PANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTA-HLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGST 1074
TCAIL++ +KCWG+ GQLG G ++L +P + ++LG GRTA A+A G TC +L + +KCWG ++G+LG G S T+ ++P S+A +LG GR A A+A G H CA+LD+ +KCWG +GQLG G T+L++P S+A+NLG GRTA A++TG HTCA+LD+ +KCWG+ + GQLG +++++ P++ AINLG GR A A+ATG TCAILD+ VKCWG YGQLG G + + ++P + ++LG GRTA A+ G ++CA+LD+ KCWG +GQLG G +A ++++P +AI LG+ RTA A+ G H CA+LD+ KCWG + QLG G +
Sbjct: 1324 TCAILDNGDLKCWGYDGAGQLGDGGSVWQNLNAPSSTPIDLGTGRTAVAVAAGHYHTCAILDNGDLKCWGYDNYGQLGDGGSNTNTNAPSSTAIDLGTGRTAVAVAAGGYHACAILDNGDLKCWGYNDKGQLGDGTNTELNAPSSTAVNLGTGRTAVAVSTGSSHTCAILDNGDLKCWGFDSGGQLGDGGSNTMTNAPSSTAINLGTGRTAVAVATGQDHTCAILDNGDVKCWGLDNYGQLGDGGSNANTNAPSSTPVDLGTGRTAVAVGIGDAYSCAILDNGETKCWGDDVYGQLGDGGSATNINAPSSTAIDLGTGRTAVALGGGKYHVCAILDNGETKCWGRDNYGQLGDGGS 1679
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: UPI001C3E53F1 (DUF11 domain-containing protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3E53F1) HSP 1 Score: 323 bits (829), Expect = 2.060e-101 Identity = 175/389 (44.99%), Postives = 233/389 (59.90%), Query Frame = 1
Query: 7 SGGTDTCAILNDSTVKCWGHGAWGQLGQGS-LEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPP-SSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSS-------PPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLG----LHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSP----PVSA--IHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASLA 1116
+G TCA+L D TV+CWG G G+LG G+ + L + VNLG GRTARA+A G TC +L D TV+CWG G +GRLG GST +++SP + LGPGR+A AI G HTCA+LDD T++CWG G+ G++G G + PP +++G GR A AIA G +HTC + D + CWG+G GQLG D + A +NL GR +A+A GT TC +LDD + +CWG+G G+LG G D S+ I LG GRTA I+ G H+CA+LD V+CWG G G+LG GST ++ P SA + LG+ R A AI+ G HTCALLDD T++CWGFG +LG G+ ++GD P+ + A
Sbjct: 38 AGEEHTCAVLADRTVRCWGRGLAGRLGYGNEVNQLSAGGGGPVNLGPGRTARAVAAGDYHTCAILDDATVRCWGFGANGRLGYGSTVNVTSPAFAPPVPLGPGRRAMAITAGSAHTCAILDDGTVRCWGAGSSGRMGLGTQASIGDDEVPGAVPP---VDIGAGRRAVAIAAGDFHTCVIRDDGALVCWGFGQGGQLGHGGTADIGDDETPAAAGPVNLN-GRRVRAVAGGTAHTCVVLDDGSARCWGFGGDGRLGYGGRADIPSAASAGPIALGPGRTAVGISAGEAHSCAILDTGAVRCWGFGGNGRLGYGSTDAIADEAGETPASAGPVALGAGRVAHAISLGFSHTCALLDDGTLRCWGFGGSGRLGYGNETSVGDSPSRGVAAA 422
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A519CXF3_9EURY (Uncharacterized protein n=2 Tax=Archaea TaxID=2157 RepID=A0A519CXF3_9EURY) HSP 1 Score: 332 bits (851), Expect = 3.360e-101 Identity = 176/371 (47.44%), Postives = 242/371 (65.23%), Query Frame = 1
Query: 1 VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASL 1113
+ SG + TC IL+D +V CWGH +GQLG G+ + +P ++ +LG+GRTA AI+ G TC +L D +V CWG +G+LG +T + PS ++LG GR A AI++G HTCA+LDD T+ CWG G LG G TT ++P ++ +LG GRTA AI++GGYHTCA+LD +V CWG GQLG S S+ + + +LG+ R A AI++G TC ILD+ +V CWGY + GQLG G+T D +S S+ LG GRTA AI++G HTCA+LDD +V CWG + GQLG G+T ++P ++ LG+ RTA AI++G+ HTCALLDD TV CWG+ + LG G+T + PT +SL
Sbjct: 460 ISSGQSHTCIILDDGSVSCWGHNYFGQLGDGTTTNRNTPTQTS-SLGIGRTAVAISSGYYHTCAILDDGSVSCWGDNRYGQLGDETTITNRNTPSQTSSLGTGRTAIAISSGSSHTCAILDDGTVSCWGYNGYGGLGDGTTTQRNTPTQTS-SLGTGRTAVAISSGGYHTCAILDDGSVSCWGDNRYGQLGDGSTTD-SNISTQTSSLGINRGAVAISSGQSHTCIILDNGSVSCWGYNWNGQLGDGTTTDKNTSTQTSS--LGTGRTAVAISSGAYHTCAILDDGSVSCWGWNNGGQLGDGTTTQRNTPTQTSS-LGNGRTAVAISSGSRHTCALLDDGTVSCWGYNGYGGLGDGTTTQR-NTPTPTSSL 823
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: A0A4Q6AL42_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6AL42_9PROT) HSP 1 Score: 317 bits (812), Expect = 4.090e-101 Identity = 163/362 (45.03%), Postives = 225/362 (62.15%), Query Frame = 1
Query: 1 VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLE------DLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTTDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQG 1068
V SGG+ +CA+L+D++V CWG+ +LG G D PP + LG G+TA+A+A+ +C +L D ++KCWG+ G+LG G T +P +++ NLG RKA +I+ G HTCA+LDD+T+KCWG + GQLG G+ + PPS+ INLG GR AK+++ G YHTCALLD STVKCWG A+GQLG S+PA INLG G A IA G CA D +KCWG GQLG G D + P S I++G R +++ G +HTC L+DDS+++CWG + GQLG G +PP +AI+ G++ K+++AG H C +LDD+T+KCWG + QLG G
Sbjct: 123 VSSGGSHSCAVLDDASVACWGYNYAQELGYGDTNKYGEGIDRYMPPSFPIILGAGKTAKAVAVNYSHSCAILNDDSIKCWGQNASGQLGYGDTIRRGTPAATSINLGLNRKAVSISAGFAHTCAVLDDSTVKCWGANSAGQLGYGDYQNRLLPPSTPINLGNGRLAKSLSLGAYHTCALLDDSTVKCWGNNANGQLGYGDKTIRSAPALLPINLGSGVKAVDIAAGAYHNCAATSDGNLKCWGRNKNGQLGYGDINDRLL-PDSSFIDIGA-RGVVSVSAGLSHTCTLMDDSSLQCWGGNEEGQLGYGDLIERHTPPQTAINFGASLV-KSLSAGRLHNCVILDDATLKCWGSNSYGQLGGG 481
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Match: UPI001C3C70E5 (DUF11 domain-containing protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3C70E5) HSP 1 Score: 319 bits (818), Expect = 8.880e-100 Identity = 170/387 (43.93%), Postives = 234/387 (60.47%), Query Frame = 1
Query: 10 GGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDLLS----PPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGSTTDLSSPPSS-ATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNTT---DLSSPPSSAI-NLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSP----ANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSP------PVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASL 1113
G TCA++ D +V+CWG G G+LG G +++LS PP V+LG GRT RAIA G TC ++ D +V+CWG G +GRLG G T D+ SP ++ A ++GPGR A+AI G HTC + DD + CWG G G+LG GN D SP S+ + +LG GRTA AI+ G +HTCA+ D ++ CWG+G+ GQLG + A +NL GR A+A+A G TC +LDD + +CWG+G G+LG G+ + + + I+LG GR+A AIA G HTCA+LD V+CWG G G+LG G+T + V + LG R A+A++ G HTCA LDD T++CWGFG +LG G A++GD P ++
Sbjct: 49 GDEHTCAVVGDRSVRCWGRGLAGRLGYGGEQNILSAAAAPP---VDLGPGRTVRAIAAGDFHTCAIVDDGSVRCWGFGANGRLGYGGTGDVRSPATAPAVDIGPGRTARAITVGASHTCVIRDDGAVVCWGNGVSGRLGYGNQASIGDNESPASAGVVDLGPGRTAVAISAGDFHTCAIRDDGSLLCWGFGSGGQLGKGGTSDIGDDETPGAAGPVNLN-GRRARAVAGGKGHTCVVLDDGSARCWGFGADGRLGYGNAANILDAAAAPPIDLGPGRSAIAIAAGEAHTCAILDTEAVRCWGFGGNGRLGYGTTDSIGDQVGETPGTVGPVALGPGRVARALSVGYSHTCAALDDGTLRCWGFGGSGRLGYGGEASVGDSPARSVAV 431 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176594 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16715 ID=mRNA_16715|Name=jgi.p|Trimin1|176594|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1131bp|location=Sequence derived from alignment at Contig_139:20213..21343- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GTGTTTTCAGGCGGAACTGACACGTGCGCCATTCTAAATGACTCCACCGTback to top protein sequence of jgi.p|Trimin1|176594 >Trimin1|176594|e_gw1.139.19.1 ID=Trimin1|176594|e_gw1.139.19.1|Name=jgi.p|Trimin1|176594|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=377bp VFSGGTDTCAILNDSTVKCWGHGAWGQLGQGSLEDLLSPPRSVVNLGLGRback to top mRNA from alignment at Contig_139:20213..21343- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16715 ID=mRNA_16715|Name=jgi.p|Trimin1|176594|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1131bp|location=Sequence derived from alignment at Contig_139:20213..21343- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_139:20213..21343- >mRNA_16715 ID=mRNA_16715|Name=jgi.p|Trimin1|176594|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1131bp|location=Sequence derived from alignment at Contig_139:20213..21343- (Tribonema minus UTEX_B_3156 )back to top |