mRNA_13795 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Match: A0A835ZCI2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI2_9STRA) HSP 1 Score: 2208 bits (5722), Expect = 0.000e+0 Identity = 1790/1790 (100.00%), Postives = 1790/1790 (100.00%), Query Frame = 1
Query: 1 MAVKRRAKRGKAPAAEADAQQNVAEASSRAAQAAQSDPQLADLESGLLAKAAXXXXXXXXXXEDQDVAGLPTVVVPTGSDGCHNCERLGGREGTVGAAAAAEWPWRTLPPKTVKEYMAYVRTLEQGSGGSSSVRLQVSDLRAQLSDVRCATCRDHLHAALDKALADGHLQLHKQLRLNVEDDGTALVLSAPTSLDALTKLSRVVQAAAGITSAEQQDGSADGSSPSLPRARLQVSGAAGKAPXXXXXXXXXXXXXXXXQQERARLLSAKELAECLRDQAAAATAIGLSSPPEPGIHQLLDELHERRKKAEELCAELAASIANEXXXXXXXXXXXXXXXAMEWNPKFAQLLQPADLNVGAWLRELTAVVTAVCALQTVAFLTGDDAIAAALARLADGVTSSYEASLARLLAAATDASEDAARAPASPQPHMVALFLASNVRRGLARQLAAKRAELAALHDGVAAALSTPQARLAVARAERARAAWEAPLLAEAFGDNDAFAQRVLAARLQLVCGDGXXXXXXXXWPHGETLVAEQQMDMQLARGVAEWEQRLEAVRADAAAAFDALLAPDVYPQTPALAAALHAWRGDFEAAWADSEQKKMLKGHASQNAVTSHSERFARVKLALKAVSDERAKIAKVTKRRQITAGGXXXXXXXXXXXXXXXXXXXXXEEARQEMELTEREQKLNQERQLAHQKQVSAKLDYRAFMVRLLSARHWQLREFYARQGARIAGRDAAARRLCGXXXXXXXXXXXXXXXXXXXXXXXXCSAWAAQRIERQLLQLEAKEQAGAAARRQRKVPARSSGGSSSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAPPEAVQAAPIVIEAVHDSDGWWQKYDPADVDGDGGFVTISRGKQARPRKXXXXXXXXXXXXXXXXXGSIAPQVRXXXXXXXXPANKEAVSTAPAQQWQXXXARAASPGGASRSFAQAPATHPLQPLRAQPXXXXXXXXXXRPVTKAPAKPVAAPTPSASRPLPXXXXXXXXXXXXXXXXTAVAVAADVKLADKAAALEVLTPDGASATGTVAPEVEVPVPAATSSNASSPAKVAAAEMPKSAAATAXXXXXXXXXXXXLAARHKALAKSAPAAPLSPAAPTVVECSTAAALAVVTAAELVVDTEASGSSGADRCAGAAPQRPPSPAAMPLVRVNGIAIQFGSLEVVELEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAEQCRDHAADAGTAPLQTGAPAPPQQQQRSQHSTQAGAANGNGCDAPLRDVQAADAAGGASEPVPQVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPYNPYLAAQHMQHGGGAPYMHGPPMYPHYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMDGQGGYGYPHMNGAGPMXXXXXXXXXXXMGMGMPFQPQYMAQPPQYTGXXXXXXXXXXXXXXXXXXXXXXXXXYVPQPMPMPGGGFMYPQYPPFQQAMALPPXXXXXXXXXXXXXXXXXXXXXXXXXXEGQGDAQQPEGQDGTDMELHCHEQYPQLPPPTXXXXXXXXXXXXXXXXXXXXXXXXAGKQFSPRWGRNGGRGSRHRKGRGDGWRGPGGAVAVTAPVTPAADTILQQKECEQASMNGVVTNGAAATGSGSADGTGTAGAVDAPAAAAVKCES 5370
MAVKRRAKRGKAPAAEADAQQNVAEASSRAAQAAQSDPQLADLESGLLAKAAXXXXXXXXXXEDQDVAGLPTVVVPTGSDGCHNCERLGGREGTVGAAAAAEWPWRTLPPKTVKEYMAYVRTLEQGSGGSSSVRLQVSDLRAQLSDVRCATCRDHLHAALDKALADGHLQLHKQLRLNVEDDGTALVLSAPTSLDALTKLSRVVQAAAGITSAEQQDGSADGSSPSLPRARLQVSGAAGKAPXXXXXXXXXXXXXXXXQQERARLLSAKELAECLRDQAAAATAIGLSSPPEPGIHQLLDELHERRKKAEELCAELAASIANEXXXXXXXXXXXXXXXAMEWNPKFAQLLQPADLNVGAWLRELTAVVTAVCALQTVAFLTGDDAIAAALARLADGVTSSYEASLARLLAAATDASEDAARAPASPQPHMVALFLASNVRRGLARQLAAKRAELAALHDGVAAALSTPQARLAVARAERARAAWEAPLLAEAFGDNDAFAQRVLAARLQLVCGDGXXXXXXXXWPHGETLVAEQQMDMQLARGVAEWEQRLEAVRADAAAAFDALLAPDVYPQTPALAAALHAWRGDFEAAWADSEQKKMLKGHASQNAVTSHSERFARVKLALKAVSDERAKIAKVTKRRQITAGGXXXXXXXXXXXXXXXXXXXXXEEARQEMELTEREQKLNQERQLAHQKQVSAKLDYRAFMVRLLSARHWQLREFYARQGARIAGRDAAARRLCGXXXXXXXXXXXXXXXXXXXXXXXXCSAWAAQRIERQLLQLEAKEQAGAAARRQRKVPARSSGGSSSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAPPEAVQAAPIVIEAVHDSDGWWQKYDPADVDGDGGFVTISRGKQARPRKXXXXXXXXXXXXXXXXXGSIAPQVRXXXXXXXXPANKEAVSTAPAQQWQXXXARAASPGGASRSFAQAPATHPLQPLRAQPXXXXXXXXXXRPVTKAPAKPVAAPTPSASRPLPXXXXXXXXXXXXXXXXTAVAVAADVKLADKAAALEVLTPDGASATGTVAPEVEVPVPAATSSNASSPAKVAAAEMPKSAAATAXXXXXXXXXXXXLAARHKALAKSAPAAPLSPAAPTVVECSTAAALAVVTAAELVVDTEASGSSGADRCAGAAPQRPPSPAAMPLVRVNGIAIQFGSLEVVELEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAEQCRDHAADAGTAPLQTGAPAPPQQQQRSQHSTQAGAANGNGCDAPLRDVQAADAAGGASEPVPQVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPYNPYLAAQHMQHGGGAPYMHGPPMYPHYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMDGQGGYGYPHMNGAGPMXXXXXXXXXXXMGMGMPFQPQYMAQPPQYTGXXXXXXXXXXXXXXXXXXXXXXXXXYVPQPMPMPGGGFMYPQYPPFQQAMALPPXXXXXXXXXXXXXXXXXXXXXXXXXXEGQGDAQQPEGQDGTDMELHCHEQYPQLPPPTXXXXXXXXXXXXXXXXXXXXXXXXAGKQFSPRWGRNGGRGSRHRKGRGDGWRGPGGAVAVTAPVTPAADTILQQKECEQASMNGVVTNGAAATGSGSADGTGTAGAVDAPAAAAVKCES
Sbjct: 1 MAVKRRAKRGKAPAAEADAQQNVAEASSRAAQAAQSDPQLADLESGLLAKAAXXXXXXXXXXEDQDVAGLPTVVVPTGSDGCHNCERLGGREGTVGAAAAAEWPWRTLPPKTVKEYMAYVRTLEQGSGGSSSVRLQVSDLRAQLSDVRCATCRDHLHAALDKALADGHLQLHKQLRLNVEDDGTALVLSAPTSLDALTKLSRVVQAAAGITSAEQQDGSADGSSPSLPRARLQVSGAAGKAPXXXXXXXXXXXXXXXXQQERARLLSAKELAECLRDQAAAATAIGLSSPPEPGIHQLLDELHERRKKAEELCAELAASIANEXXXXXXXXXXXXXXXAMEWNPKFAQLLQPADLNVGAWLRELTAVVTAVCALQTVAFLTGDDAIAAALARLADGVTSSYEASLARLLAAATDASEDAARAPASPQPHMVALFLASNVRRGLARQLAAKRAELAALHDGVAAALSTPQARLAVARAERARAAWEAPLLAEAFGDNDAFAQRVLAARLQLVCGDGXXXXXXXXWPHGETLVAEQQMDMQLARGVAEWEQRLEAVRADAAAAFDALLAPDVYPQTPALAAALHAWRGDFEAAWADSEQKKMLKGHASQNAVTSHSERFARVKLALKAVSDERAKIAKVTKRRQITAGGXXXXXXXXXXXXXXXXXXXXXEEARQEMELTEREQKLNQERQLAHQKQVSAKLDYRAFMVRLLSARHWQLREFYARQGARIAGRDAAARRLCGXXXXXXXXXXXXXXXXXXXXXXXXCSAWAAQRIERQLLQLEAKEQAGAAARRQRKVPARSSGGSSSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAPPEAVQAAPIVIEAVHDSDGWWQKYDPADVDGDGGFVTISRGKQARPRKXXXXXXXXXXXXXXXXXGSIAPQVRXXXXXXXXPANKEAVSTAPAQQWQXXXARAASPGGASRSFAQAPATHPLQPLRAQPXXXXXXXXXXRPVTKAPAKPVAAPTPSASRPLPXXXXXXXXXXXXXXXXTAVAVAADVKLADKAAALEVLTPDGASATGTVAPEVEVPVPAATSSNASSPAKVAAAEMPKSAAATAXXXXXXXXXXXXLAARHKALAKSAPAAPLSPAAPTVVECSTAAALAVVTAAELVVDTEASGSSGADRCAGAAPQRPPSPAAMPLVRVNGIAIQFGSLEVVELEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAEQCRDHAADAGTAPLQTGAPAPPQQQQRSQHSTQAGAANGNGCDAPLRDVQAADAAGGASEPVPQVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPYNPYLAAQHMQHGGGAPYMHGPPMYPHYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMDGQGGYGYPHMNGAGPMXXXXXXXXXXXMGMGMPFQPQYMAQPPQYTGXXXXXXXXXXXXXXXXXXXXXXXXXYVPQPMPMPGGGFMYPQYPPFQQAMALPPXXXXXXXXXXXXXXXXXXXXXXXXXXEGQGDAQQPEGQDGTDMELHCHEQYPQLPPPTXXXXXXXXXXXXXXXXXXXXXXXXAGKQFSPRWGRNGGRGSRHRKGRGDGWRGPGGAVAVTAPVTPAADTILQQKECEQASMNGVVTNGAAATGSGSADGTGTAGAVDAPAAAAVKCES 1790
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Match: A0A835YL58_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL58_9STRA) HSP 1 Score: 270 bits (690), Expect = 4.680e-69 Identity = 234/704 (33.24%), Postives = 337/704 (47.87%), Query Frame = 1
Query: 244 CHNCERLGGREGTVGAAAAAEWPWRTLPPKTVKEYMAYVRTLEQGSGGSSSVRLQVSDLRAQLSDVRCATCRDHLHAALDKAL-ADGHLQLHKQLRLNVEDDGT---ALVLSAPTSLDALTKLSRVVQAAAGITSAEQQDGSADGSSPSLPRARLQVSGAAGKAPXXXXXXXXXXXXXXXXQQERARLLSAKELAECLRDQAAAATAIGLSSPPEPGIHQLLDELHERRKKAEELCAELAASIANEXXXXXXXXXXXXXXXAMEWNPKFAQLLQPADLNVGAWLRELTAVVTAVCALQTVAFLTG--DDAIAAALAR-LADGVTSSYEASLARLLAAATDASEDAARAPASPQPHMVALFLASNVRRGLARQLAAKRAELAALHDGVAAALSTPQARLAVARAERARAAWEAPLLAEAFGDNDAFAQRVLAARLQLVCGDGXXXXXXXXWPHGETLVAEQQMDMQLARGVAEWEQRLEAVRADAAAAFDALLAPDVYPQTPALAAALHAWRGDFEAAWADSEQKKMLKGHASQNAVTSHSERFARVKLALKAVSDERAKIAKVTKRRQITAGGXXXXXXXXXXXXXXXXXXXXXEEARQEMELTEREQKLNQERQLAHQKQVSAKLDYRAFMVRLLSARHWQLREFYARQGARIAGRDAAARRLCGXXXXXXXXXXXXXXXXXXXXXXXXCSAWAAQRIERQLL 2334
CHN + ++ AA+ +WPW TLP K V+E+ A + S +++ +++R ++ +V+C +CR+ LH AL++ D ++L K+++ + D L L + +D+L L+R+V+ A G A + A S + A QE L+ +++ +CL + + + LL+ + R A+ LA S+ + WNPK A LQ AD + WL+ +T V+ AV LQ+VAFLTG D + AA R LADG+ +YEA+LARLL A ++ E+ + PQ M+ LFLA N+RR AR +AA+RAELAALHD A LL+E F + D A+R L R+ V GDG GE + A+Q +D QL R VA+W+ RL+ R A L+P YPQTPA A+ AWR +F+A W ++EQ+++ + +Q V H+E FARVK ALKA +++ + K XXXXXXXX R+EME+T R Q+L+ ERQLAHQ Q+ KL++RAFMVRLL R+W+ R YAR R A RLCG AWAAQR+E+QLL
Sbjct: 87 CHNLQPPATSR-SITRAASTKWPWETLPQKAVREFFATAK--------DSVIKVTDAEVRQRIREVQCPSCRELLHGALNECEDTDDQVRLSKRIKFTIAQDANRLEVLTLVGVSGVDSLEALARIVETAVGGADAVRSLSEAPDSEAAXXXXXXXXXXXA--------------------PQEDPYALTTRDMLDCLETSGLPEEPLKNDLHDDESLPALLEHMKSSRAHAD-----LACSVVRDDAAAASGDAADDDDA--NWNPKSAAALQRADAALSQWLQYITGVLIAVGTLQSVAFLTGAGDGSRAADDVRALADGLWGAYEAALARLLDLALESREEQVKL--QPQQPMMVLFLAPNLRRATARAVAARRAELAALHDHGA-------------------------LLSEPFKELDELARRALTMRIGAVSGDGGGSGFGGA---GEAMAAQQTLDQQLVRVVADWDTRLDRFRDSMLAQAAQELSPIAYPQTPAQTDAMKAWRVEFDADWEENEQRRVFQSQDAQKQVNGHNEDFARVKHALKAAGEQQESLDKRXXXXXXXXXXXXXXXXXXLSSRLDHDL------TREEMEVTARMQELSVERQLAHQHQMGVKLNFRAFMVRLLQRRYWRTRALYARLRCLNISRARAEARLCGDAAAGLARLRLLLTVAALDAAGAAVGAWAAQRVEQQLL 718
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Match: A0A835ZBN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBN1_9STRA) HSP 1 Score: 591 bits (1524), Expect = 4.040e-212 Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1
Query: 1 MGEVVFQKAQPLLVIAKKLKLWQTAAFIGSAGAAGDVACQVMEADDKLHWKWNMARTARIAGTGIFVLTPLSIGWNHAAERLFPGRHVKAMLGKLAVQLLCMPPMISIQFASMTLMEGKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKANESDLVVDVALTPEQEVLLAEHIVESPGGSAPQPAVAAXXXXXXXXXXXXXXXXXHRRRPLVSGAGTGGAIRIRSRGADASLLDKMEPAVTPSQQQAQQPMRFKLPSEGSEREGRGGAEPPQLQLRHHRILVSRKKTSIVAM 960
MGEVVFQKAQPLLVIAKKLKLWQTAAFIGSAGAAGDVACQVMEADDKLHWKWNMARTARIAGTGIFVLTPLSIGWNHAAERLFPGRHVKAMLGKLAVQLLCMPPMISIQFASMTLMEGKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKANESDLVVDVALTPEQEVLLAEHIVESPGGSAPQPAVAAXXXXXXXXXXXXXXXXXHRRRPLVSGAGTGGAIRIRSRGADASLLDKMEPAVTPSQQQAQQPMRFKLPSEGSEREGRGGAEPPQLQLRHHRILVSRKKTSIVAM
Sbjct: 1 MGEVVFQKAQPLLVIAKKLKLWQTAAFIGSAGAAGDVACQVMEADDKLHWKWNMARTARIAGTGIFVLTPLSIGWNHAAERLFPGRHVKAMLGKLAVQLLCMPPMISIQFASMTLMEGKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKANESDLVVDVALTPEQEVLLAEHIVESPGGSAPQPAVAAXXXXXXXXXXXXXXXXXHRRRPLVSGAGTGGAIRIRSRGADASLLDKMEPAVTPSQQQAQQPMRFKLPSEGSEREGRGGAEPPQLQLRHHRILVSRKKTSIVAM 320
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Match: A0A6H5JW72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW72_9PHAE) HSP 1 Score: 139 bits (350), Expect = 3.720e-35 Identity = 69/156 (44.23%), Postives = 97/156 (62.18%), Query Frame = 1
Query: 94 GAAGDVACQVMEA-DDKLHWKWNMARTARIAGTGIFVLTPLSIGWNHAAERLFPGRHVKAMLGKLAVQLLCMPPMISIQFASMTLME-GKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKANESDLVV 555
G GD CQ ME + + W+ RT R+ TG F +TP S WN AERL PGR ++A++ KL V + +PPM++ QFAS+TL+E GK V K+ +D T +WP V ++NS FVPV +RPV SF G+FWN+Y+S++AN + + V
Sbjct: 35 GKDGDALCQAMETFGTERKFAWDHTRTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVMTKLGVSVAVLPPMLAAQFASLTLLEEGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEV 190
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Match: D7G038_ECTSI (Integral membrane protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G038_ECTSI) HSP 1 Score: 132 bits (331), Expect = 9.540e-33 Identity = 63/135 (46.67%), Postives = 89/135 (65.93%), Query Frame = 1
Query: 154 WNMARTARIAGTGIFVLTPLSIGWNHAAERLFPGRHVKAMLGKLAVQLLCMPPMISIQFASMTLME-GKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKANESDLVV 555
W+ ART R+ TG F +TP S WN AERL PGR ++A++ KL V + +PPM++ QFAS+TL+E GK V K+ +D T +WP V ++NS FVPV +RPV SF G+FWN+Y+S++AN + + V
Sbjct: 12 WDHARTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVVTKLGVSVAVLPPMLAAQFASLTLLEEGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSAFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEV 146
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Match: A0A813WUK2_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813WUK2_9BILA) HSP 1 Score: 116 bits (291), Expect = 5.460e-27 Identity = 65/176 (36.93%), Postives = 95/176 (53.98%), Query Frame = 1
Query: 70 TAAFIGSAGAAGDVACQVMEAD------DK-------LHWKWNMARTARIAGTGIFVLTPLSIGWNHAAERLFPGRHVKAMLGKLAVQLLCMPPMISIQFASMTLMEGKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKANESDLVVD 558
T IG++ AGD+ CQ +E DK L W WN RT + + + V TP S ERLFPG+ + K+ L P IS+ F S+ L++G+ ++ + KI + +T G CYWPFV +N R++P+ RP +G+FAG+FWNIY+S AN+ + V D
Sbjct: 26 TTLAIGTSVTAGDLMCQYLERHKTTAQKDKGSDNASGLEW-WNSQRTLIMCTSAVLVSTPYSFTLARTVERLFPGKQGIQIAKKMLTNTLMGPVGISLAFTSIGLLKGQSFEEIKLKIVHHMPQTFLLGNCYWPFVSFINFRYIPLNYRPFLGTFAGMFWNIYVSTIANKDNDVED 200
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Match: A0A6D2L2G1_9BRAS (Uncharacterized protein n=2 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2L2G1_9BRAS) HSP 1 Score: 80.1 bits (196), Expect = 1.920e-13 Identity = 42/129 (32.56%), Postives = 69/129 (53.49%), Query Frame = 1
Query: 154 WNMARTARIAGTGIFVLTPLSIGWNHAAERLFPGRHVKAMLGKLAV-QLLCMPPMISIQFASMTLMEGKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKAN 537
+++ RTAR+AG G+FVL P W + RLFP R + K+A+ Q + P M I F+ ++G+ + ++++DL+ G YWP + RF PV +P+V + W IY+++ AN
Sbjct: 145 YDLVRTARMAGYGLFVLGPTLHYWFNFMSRLFPQRDLITTFKKMAMGQTIYGPTMTVIFFSLNASLQGESGSEIFARLKRDLIPAMFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMAN 273
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Match: UPI00053A301D (protein SYM1-like n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A301D) HSP 1 Score: 79.0 bits (193), Expect = 3.580e-13 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 1
Query: 100 AGDVACQVMEADDKLHWKWNMARTARIAGTGIFVLTPLSIGWNHAAERLFPGRHVKAMLGKLAV-QLLCMPPMISIQFASMTLMEGKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKAN 537
A D++ Q + K +++ RTAR+ G G+FVL P W + RLFP R + K+A+ Q + P M I F+ ++G+ + ++++DLL G YWP + RF PV +P+V + W IY+++ AN
Sbjct: 107 AADLSSQTIA--KKSSESYDLVRTARMGGYGLFVLGPTLHYWFNFMSRLFPTRDLITTFKKMAMGQAIYGPTMTVIFFSLNASLQGESGSDILARLKRDLLPALFNGVMYWPVCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMAN 251
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Match: V4MEZ0_EUTSA (Uncharacterized protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4MEZ0_EUTSA) HSP 1 Score: 78.6 bits (192), Expect = 4.540e-13 Identity = 44/147 (29.93%), Postives = 76/147 (51.70%), Query Frame = 1
Query: 100 AGDVACQVMEADDKLHWKWNMARTARIAGTGIFVLTPLSIGWNHAAERLFPGRHVKAMLGKLAV-QLLCMPPMISIQFASMTLMEGKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKAN 537
A D++ Q + + + ++ RTAR+AG G+FVL P W + RLFP + + K+A+ Q + P M I F+ ++G+ + ++++D+L G YWP + RF PV +P+V + W IY+++ AN
Sbjct: 102 AADLSSQTISKNSSESY--DLVRTARMAGYGLFVLGPTLHYWFNFMSRLFPKQDLITTFKKMAMGQAIYGPSMTVIFFSLNAFLQGESGSDILARLKRDVLPAMFNGVMYWPICDFMTFRFFPVHLQPLVSNSFSYLWTIYMTYMAN 246
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Match: O82324_ARATH (22 kDa peroxisomal membrane protein n=4 Tax=Arabidopsis TaxID=3701 RepID=O82324_ARATH) HSP 1 Score: 76.6 bits (187), Expect = 2.060e-12 Identity = 39/129 (30.23%), Postives = 69/129 (53.49%), Query Frame = 1
Query: 154 WNMARTARIAGTGIFVLTPLSIGWNHAAERLFPGRHVKAMLGKLAVQLLCMPPMISIQFASMTL-MEGKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKAN 537
+++ RTAR+ G G+FVL P W + RLFP + + K+A+ P++++ F S+ ++G+ + ++++DLL G YWP + RF PV +P+V + W IY+++ AN
Sbjct: 115 YDLVRTARMGGYGLFVLGPTLHYWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVILARLKRDLLPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMAN 243
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Match: R0I7M1_9BRAS (Uncharacterized protein n=2 Tax=Camelineae TaxID=980083 RepID=R0I7M1_9BRAS) HSP 1 Score: 75.9 bits (185), Expect = 4.060e-12 Identity = 40/129 (31.01%), Postives = 68/129 (52.71%), Query Frame = 1
Query: 154 WNMARTARIAGTGIFVLTPLSIGWNHAAERLFPGRHVKAMLGKLAV-QLLCMPPMISIQFASMTLMEGKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKAN 537
+++ RTAR+ G G+FVL P W + RLFP + + K+A+ Q + P M I F+ ++G+ + ++++DL+ G YWP + RF PV +P+V + W IY+++ AN
Sbjct: 119 YDLVRTARMGGYGLFVLGPTLHYWFNFMSRLFPKKDLITTFKKMAMGQTIYGPTMTVIFFSLNASLQGESGSDILARLKRDLVPALFNGVMYWPVCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMAN 247
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Match: A0A6L5DL55_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5DL55_9INSE) HSP 1 Score: 74.3 bits (181), Expect = 4.150e-12 Identity = 49/148 (33.11%), Postives = 69/148 (46.62%), Query Frame = 1
Query: 100 AGDVACQVMEADDKLHWKWNMARTARIAGTGIFVLTPLSIGWNHAAERLF-PGRHVKAMLGKLAV-QLLCMPPMISIQFASMTLMEGKGWDAVDRKIRQDLLETTAAGACYWPFVGLLNSRFVPVTNRPVVGSFAGLFWNIYLSHKAN 537
AGDV QV + K +++ RT G GIF L P W ERLF RH K K+A QL+ P ++ + L G W K+ D A WP+V + N +VP+ ++ +V LFWN+Y+S +AN
Sbjct: 27 AGDVIAQV-GVEKKTAETFDVRRTLCFTGIGIFYLGPSLRLWYGTLERLFGSARHPKVAFKKVATDQLVFAPTFLASILTLVPLTNGHSWQKAKAKLGADYWTVLKANYQLWPWVQIANFYWVPLRHQVLVVQLVALFWNVYVSWRAN 173 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
BLAST of jgi.p|Trimin1|352928 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13795 ID=mRNA_13795|Name=jgi.p|Trimin1|352928|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5717bp|location=Sequence derived from alignment at Contig_137:111902..119665+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCCGTGAAAAGAAGGGCCAAGCGAGGCAAAGCACCCGCCGCTGAAGCback to top protein sequence of jgi.p|Trimin1|352928 >Trimin1|352928|estExt_Genemark1.C_Ctg_1370015 ID=Trimin1|352928|estExt_Genemark1.C_Ctg_1370015|Name=jgi.p|Trimin1|352928|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1791bp MAVKRRAKRGKAPAAEADAQQNVAEASSRAAQAAQSDPQLADLESGLLAKback to top mRNA from alignment at Contig_137:111902..119665+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13795 ID=mRNA_13795|Name=jgi.p|Trimin1|352928|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7764bp|location=Sequence derived from alignment at Contig_137:111902..119665+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_137:111902..119665+ >mRNA_13795 ID=mRNA_13795|Name=jgi.p|Trimin1|352928|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=5373bp|location=Sequence derived from alignment at Contig_137:111902..119665+ (Tribonema minus UTEX_B_3156 )back to top |