Trimin1|352831|estExt_Genemark1.C_Ctg_1330039 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352831
Unique NameTrimin1|352831|estExt_Genemark1.C_Ctg_1330039
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length213
Homology
BLAST of jgi.p|Trimin1|352831 vs. uniprot
Match: A0A836CLT8_9STRA (40S ribosomal protein S8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT8_9STRA)

HSP 1 Score: 410 bits (1054), Expect = 1.210e-144
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
Query:    1 MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGKH 212
            MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGKH
Sbjct:    1 MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGKH 212          
BLAST of jgi.p|Trimin1|352831 vs. uniprot
Match: D7FHG3_ECTSI (40S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG3_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 4.260e-107
Identity = 160/211 (75.83%), Postives = 180/211 (85.31%), Query Frame = 0
Query:    1 MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGK 211
            MGISRDSRHKRRETGG+R + RKKRKFE+GRPAANTK+G  R+  VRCRGGN+K+RALRL++GN+SWGTEVCTRKTRILDVVYNASNNELVRTKTLVK A+V +DA PF+ WYE HYG+ IG+KKGK     KAA   +E   KSDHV+RKLA RQ  R L TLLDEQ ASGR LACISSRPGQSGRCDGYILEGKELEFYQK+L++KK K
Sbjct:    1 MGISRDSRHKRRETGGRRSKYRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVVIGLKKGK-----KAAPVEEEAVAKSDHVKRKLAKRQTDRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKKKSK 206          
BLAST of jgi.p|Trimin1|352831 vs. uniprot
Match: A0A812SFI7_SYMMI (40S ribosomal protein S8 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SFI7_SYMMI)

HSP 1 Score: 308 bits (789), Expect = 2.510e-104
Identity = 152/210 (72.38%), Postives = 180/210 (85.71%), Query Frame = 0
Query:    1 MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKG 210
            MGISRDSRHKRR TGG++  ++KKR++ELGRP ANTK+GA+RI TVRCRGGNLKFRA+RL+TGN+SWG+EVCTRKTR+LDVVYNASNNELVRTKTLVK +++ +DATPFR WYE HYG+ +GVKK K     K AA  ++  KKS  +QRKLA RQKTR LD  LD+ F+SGR+LACISSRPGQSGRCDGYILEGKEL+FY K+L +KKG
Sbjct:    1 MGISRDSRHKRRATGGRKANLKKKRQYELGRPPANTKLGASRIHTVRCRGGNLKFRAMRLDTGNFSWGSEVCTRKTRVLDVVYNASNNELVRTKTLVKNSIIQVDATPFRAWYEQHYGVKVGVKKAK-----KTAAEGEDTEKKSHSLQRKLAERQKTRTLDPALDDGFSSGRLLACISSRPGQSGRCDGYILEGKELDFYSKMLKKKKG 205          
BLAST of jgi.p|Trimin1|352831 vs. uniprot
Match: A0A2D4BEG8_PYTIN (40S ribosomal protein S8 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEG8_PYTIN)

HSP 1 Score: 305 bits (781), Expect = 3.740e-103
Identity = 161/211 (76.30%), Postives = 175/211 (82.94%), Query Frame = 0
Query:    1 MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGK 211
            MGISRDSRHKRRETGGKR Q RKKRKFELGR  ANTK+G  R+ TVR RGGN KFRALRL+TGN+SWGTEV +RKTRILDVVYNASNNELVRTKT+VKG +VSIDATPFRQWYEAHYG  IG KK        A  T D+EAKKS HVQRK+A RQ+ R LD  LDEQFASGR+LA I+SRPGQSGR DGYILEGKELEFYQ+ L+ KK K
Sbjct:    1 MGISRDSRHKRRETGGKRKQYRKKRKFELGRQPANTKLGHKRVHTVRVRGGNTKFRALRLDTGNFSWGTEVLSRKTRILDVVYNASNNELVRTKTIVKGCIVSIDATPFRQWYEAHYGAKIGQKKN-------AVETADDEAKKSSHVQRKIANRQRDRVLDVKLDEQFASGRLLAAIASRPGQSGRADGYILEGKELEFYQRKLATKKSK 204          
BLAST of jgi.p|Trimin1|352831 vs. uniprot
Match: H3G699_PHYRM (40S ribosomal protein S8 n=2 Tax=Phytophthora TaxID=4783 RepID=H3G699_PHYRM)

HSP 1 Score: 302 bits (773), Expect = 5.770e-102
Identity = 161/210 (76.67%), Postives = 173/210 (82.38%), Query Frame = 0
Query:    2 GISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGK 211
            GISRDSRHKRRETGGKR Q RKKRKFELGR  A TK+G  R+ TVR RGG+LKFRAL LETGN+SWGTEVC RKTRILDVVYNASNNELVRTKTLVKGAVV IDATPFRQWYEAHYG+ IGVKK        A    +EE KKSDHV RKLAARQ+TR LD  +DEQ  SGR+LA ISSRPGQSGR DGY+LEGKELEFYQ+ L+ KK K
Sbjct:    1 GISRDSRHKRRETGGKRKQFRKKRKFELGRQPAATKLGGKRVHTVRVRGGHLKFRALHLETGNFSWGTEVCARKTRILDVVYNASNNELVRTKTLVKGAVVLIDATPFRQWYEAHYGVKIGVKKN-------AEKQEEEEVKKSDHVLRKLAARQRTRVLDPKIDEQVTSGRLLAVISSRPGQSGRADGYLLEGKELEFYQRKLATKKSK 203          
BLAST of jgi.p|Trimin1|352831 vs. uniprot
Match: A0A8K1C734_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C734_PYTOL)

HSP 1 Score: 302 bits (773), Expect = 6.180e-102
Identity = 161/211 (76.30%), Postives = 174/211 (82.46%), Query Frame = 0
Query:    1 MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGK 211
            MGISRDSRHKRRETGGKR Q RKKRKFE GR  ANTK+G  R+ TVR RGG+ KFRALRL+TGN+SWGTEV  RKTRILDVVYNASNNELVRTKTLVKGA+V +DATPFRQWYEAHYG  IG KK        AAA T +E KKSDHV RK+AARQ+TR LD  LDEQFASGR+ A ISSRPGQSGR DGYILEGKELEFYQ+ L+ KK K
Sbjct:    1 MGISRDSRHKRRETGGKRKQYRKKRKFESGRQPANTKLGHKRVHTVRVRGGHTKFRALRLDTGNFSWGTEVTARKTRILDVVYNASNNELVRTKTLVKGAIVLVDATPFRQWYEAHYGTKIGQKKN-------AAAETADETKKSDHVVRKIAARQRTRVLDQKLDEQFASGRLFAAISSRPGQSGRADGYILEGKELEFYQRKLATKKSK 204          
BLAST of jgi.p|Trimin1|352831 vs. uniprot
Match: A0A6V2QD30_HETAK (40S ribosomal protein S8 n=2 Tax=Sar TaxID=2698737 RepID=A0A6V2QD30_HETAK)

HSP 1 Score: 301 bits (770), Expect = 1.770e-101
Identity = 156/209 (74.64%), Postives = 173/209 (82.78%), Query Frame = 0
Query:    1 MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKK 209
            MGISRDSRHKRR TGGKR Q RKKRKFELGR +ANTK+GA R+  VRC GGN KFRA+RLETG +SWGTE  +RKT+ILDVVYNASNNELVRTKTLVKGA++SIDA P RQWYE HYG+ IG KKGK+AAA       +E   KS HV RK A R KTR LD LLDEQFA+GR+LA ISSRPGQSGRCDGY+LEGKELEFYQK L++KK
Sbjct:    1 MGISRDSRHKRRHTGGKRAQFRKKRKFELGRQSANTKLGAKRVHEVRCMGGNKKFRAIRLETGTFSWGTEAISRKTKILDVVYNASNNELVRTKTLVKGAIISIDAAPLRQWYEQHYGVQIGKKKGKKAAA------EEEAVAKSSHVARKQAQRCKTRTLDPLLDEQFANGRLLASISSRPGQSGRCDGYVLEGKELEFYQKQLAKKK 203          
BLAST of jgi.p|Trimin1|352831 vs. uniprot
Match: A0A7S2USH6_9STRA (40S ribosomal protein S8 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USH6_9STRA)

HSP 1 Score: 300 bits (768), Expect = 8.720e-101
Identity = 156/212 (73.58%), Postives = 172/212 (81.13%), Query Frame = 0
Query:    1 MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGKH 212
            MGISRDSRHKRR TGGKR + RKKRKFE+GRPAANTK+G  R+  VRC GGN+K+RA+RLE G YSWGTE  +RK RILDVVYNASNNELVRTKTLVK AVV IDA PF+ WYEAHYG+ IG KKGKR    K     DE+AKKS HVQRK+A RQK R L   LD+QF  GR+LACISSRPGQSGR DGYILEGKELEFYQK+L+RKK  H
Sbjct:   21 MGISRDSRHKRRHTGGKRAKFRKKRKFEMGRPAANTKLGTKRVHPVRCMGGNMKYRAMRLEAGTYSWGTEAISRKARILDVVYNASNNELVRTKTLVKNAVVLIDAHPFKAWYEAHYGVVIGKKKGKRMP--KKDEADDEDAKKSSHVQRKIAKRQKDRTLMQNLDDQFVGGRLLACISSRPGQSGRADGYILEGKELEFYQKMLARKKKGH 230          
BLAST of jgi.p|Trimin1|352831 vs. uniprot
Match: A0A662X634_9STRA (40S ribosomal protein S8 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X634_9STRA)

HSP 1 Score: 300 bits (769), Expect = 1.890e-100
Identity = 158/211 (74.88%), Postives = 173/211 (81.99%), Query Frame = 0
Query:    1 MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGK 211
            MGISRDSRHKRRETGGKR Q RKKRKFELGR   NTK+G  R+  VR RGG++KFRAL LETGN+SWGTEV  RKTRILDVVYNASNNELVRTKTLVKGAVV +DATPFRQWYEAHYG+ IGVKK        A    +EE KKSDHV RKLA+RQ+TR LD  +DEQF SGR+LA ISSRPGQSGR DGY+LEGKELEFYQ+ L+ KK K
Sbjct:    1 MGISRDSRHKRRETGGKRKQFRKKRKFELGRQPGNTKLGGKRVHAVRVRGGHMKFRALHLETGNFSWGTEVSARKTRILDVVYNASNNELVRTKTLVKGAVVLVDATPFRQWYEAHYGVKIGVKKN-------AEKVEEEEVKKSDHVLRKLASRQRTRELDVKIDEQFMSGRLLAVISSRPGQSGRADGYLLEGKELEFYQRKLATKKSK 204          
BLAST of jgi.p|Trimin1|352831 vs. uniprot
Match: A0A662XWQ4_9STRA (40S ribosomal protein S8 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XWQ4_9STRA)

HSP 1 Score: 301 bits (770), Expect = 3.290e-100
Identity = 158/211 (74.88%), Postives = 173/211 (81.99%), Query Frame = 0
Query:    1 MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGK 211
            MGISRDSRHKRRETGGKR Q RKKRKFE+GR   NTK+G  R+  VR RGG++KFRAL LETGN+SWGTEV  RKTRILDVVYNASNNELVRTKTLVKGAVV +DATPFRQWYEAHYG+ IGVKK        A    +EE KKSDHV RKLAARQ+TR LD  +DEQF SGR+LA ISSRPGQSGR DGY+LEGKELEFYQ+ L+ KK K
Sbjct:    1 MGISRDSRHKRRETGGKRKQFRKKRKFEIGRQPGNTKLGGKRVHAVRVRGGHMKFRALHLETGNFSWGTEVSARKTRILDVVYNASNNELVRTKTLVKGAVVLVDATPFRQWYEAHYGVKIGVKKN-------AEKVEEEEVKKSDHVLRKLAARQRTRELDVKIDEQFMSGRLLAVISSRPGQSGRADGYLLEGKELEFYQRKLATKKSK 204          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352831 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLT8_9STRA1.210e-144100.0040S ribosomal protein S8 n=1 Tax=Tribonema minus T... [more]
D7FHG3_ECTSI4.260e-10775.8340S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=... [more]
A0A812SFI7_SYMMI2.510e-10472.3840S ribosomal protein S8 n=1 Tax=Symbiodinium micr... [more]
A0A2D4BEG8_PYTIN3.740e-10376.3040S ribosomal protein S8 n=1 Tax=Pythium insidiosu... [more]
H3G699_PHYRM5.770e-10276.6740S ribosomal protein S8 n=2 Tax=Phytophthora TaxI... [more]
A0A8K1C734_PYTOL6.180e-10276.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6V2QD30_HETAK1.770e-10174.6440S ribosomal protein S8 n=2 Tax=Sar TaxID=2698737... [more]
A0A7S2USH6_9STRA8.720e-10173.5840S ribosomal protein S8 n=1 Tax=Fibrocapsa japoni... [more]
A0A662X634_9STRA1.890e-10074.8840S ribosomal protein S8 n=1 Tax=Nothophytophthora... [more]
A0A662XWQ4_9STRA3.290e-10074.8840S ribosomal protein S8 n=1 Tax=Nothophytophthora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.290.70coord: 23..209
e-value: 1.3E-53
score: 182.3
NoneNo IPR availableCDDcd11380Ribosomal_S8e_likecoord: 5..193
e-value: 4.06796E-62
score: 188.112
IPR042563Ribosomal protein S8e subdomain, eukaryotesGENE3D1.10.168.20Ribosomal protein S8e, subdomaincoord: 108..172
e-value: 1.6E-24
score: 88.3
IPR001047Ribosomal protein S8eTIGRFAMTIGR00307TIGR00307coord: 1..195
e-value: 1.2E-48
score: 162.5
IPR001047Ribosomal protein S8ePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 1..211
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 5..193
e-value: 5.4E-56
score: 188.5
IPR018283Ribosomal protein S8e, conserved sitePROSITEPS01193RIBOSOMAL_S8Ecoord: 11..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_133contigContig_133:270220..273431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352831mRNA_14047Tribonema minus UTEX_B_3156 mRNAContig_133 270220..273441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352831|estExt_Genemark1.C_Ctg_1330039 ID=Trimin1|352831|estExt_Genemark1.C_Ctg_1330039|Name=jgi.p|Trimin1|352831|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=213bp
MGISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRG
GNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGA
VVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQR
KLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEF
YQKILSRKKGKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042563Ribosomal_protein_S8e_euk
IPR001047Ribosomal_S8e
IPR022309Ribosomal_S8e/biogenesis_NSA2
IPR018283Ribosomal_S8e_CS