mRNA_14017 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352815 vs. uniprot
Match: A0A836CKL9_9STRA (Histidine phosphatase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL9_9STRA) HSP 1 Score: 595 bits (1534), Expect = 5.830e-213 Identity = 321/322 (99.69%), Postives = 321/322 (99.69%), Query Frame = 1
Query: 1 MTLSSHPEVAEALALEQPTVEAKYRVIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGDVDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVRAAQAMGPLSARYLANPGQIAARMKLESNEAQLGLHVPDAEAAGXXXXXXXXXXXXXXXXXXXXTAAAA 966
MTLSSHPEVAEALALEQPTVEAKYRVIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGDVDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVRAAQAMGPLSARYLANPGQIAARMKLESNEAQLGLHVPDAEAAGXXXXXXXXXXXXXXXXXXX TAAAA
Sbjct: 1 MTLSSHPEVAEALALEQPTVEAKYRVIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGDVDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVRAAQAMGPLSARYLANPGQIAARMKLESNEAQLGLHVPDAEAAGXXXXXXXXXXXXXXXXXXXGTAAAA 322
BLAST of jgi.p|Trimin1|352815 vs. uniprot
Match: A0A835YKM6_9STRA (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKM6_9STRA) HSP 1 Score: 434 bits (1115), Expect = 1.190e-149 Identity = 212/264 (80.30%), Postives = 237/264 (89.77%), Query Frame = 1
Query: 76 VIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGD-VDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVRAAQAMGPLSARYLANPGQIAARMKLESNEAQLGL 864
V+ +RHGESTYNAEGRFIGWADPPL+ GEEEAR A LRE+G D +D+IFVSYL+RSIK+GWI+A+ELG SH+PV+SDWRLNEQMYG L+G LKRDVA EHG++LTQKWRRSYDIAPPAV GARGYFPAGD KYA+LTDDDAPESWCGSA+TESLKDTQARAWRLWKERIAPRARAGRT LVV HGNVIRA+LKRLDG+G ERLR+VCIPRAVPLVYELDA+MRPVR+A A G LS +LANP QIAA +K+ES EAQLGL
Sbjct: 12 VLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQIAAALKIESTEAQLGL 275
BLAST of jgi.p|Trimin1|352815 vs. uniprot
Match: A0A6T5MY23_HETAK (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A6T5MY23_HETAK) HSP 1 Score: 276 bits (706), Expect = 1.170e-86 Identity = 140/285 (49.12%), Postives = 187/285 (65.61%), Query Frame = 1
Query: 67 KYRVIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGDVDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVRAAQAMGPLSARYLANPGQIAARMKLESNEA----------QLGLHVPDAEAAG 891
++ ++F+RHGES +N + F GW D ++ G +EAR AG+L++ GL + D ++ S LKR+IK+ V + +G I + DW+LNEQMYG LEGL K D +EHGLE QKWRRSY PPA PGARGYFP DPKYA LT+ DAP+SWCG+ TESLKDTQARAWRLW+E IAP +AG+ LV AHGN +RA L+RLD + + L + IPRA PLVY LD + P+++ +M PLS R++ + ++ A++ E + PDAE AG
Sbjct: 79 RHTIVFIRHGESVWNQDNIFTGWQDIDVTEAGVQEARAAGELMQRQGL-EFDVVYTSMLKRAIKSAHHVTDAMGLGWIDMHKDWKLNEQMYGRLEGLNKVDCVQEHGLEQVQKWRRSYTDPPPARPGARGYFPEDDPKYAGLTNFDAPDSWCGTPGTESLKDTQARAWRLWREEIAPAVKAGKRVLVCAHGNTLRAFLRRLDDIPNDLLMQLDIPRATPLVYTLDEHLNPIQSTSSMYPLSGRFIGSMEELEAKVSKERTQCIPPPEKKPQRVKTAAFPDAETAG 362
BLAST of jgi.p|Trimin1|352815 vs. uniprot
Match: A0A7S2V0B9_9STRA (Phosphoglycerate mutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0B9_9STRA) HSP 1 Score: 259 bits (662), Expect = 5.800e-80 Identity = 128/259 (49.42%), Postives = 174/259 (67.18%), Query Frame = 1
Query: 43 LEQPTVEAKYRVIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGDVDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVRAAQAMGPLSARYLANPGQI 819
L+QP + V+ +RHGEST+N + F GW D L+ G +EAR G+++ ++GL + D ++ S LKR+IKT + + + +S + V DWRLNEQMYGALEG K+ +EHG E QKWRR Y APP GYFP DP+YA TD DAP+SWCGS TESLKDTQAR W LW++ I P ++G+ LV HGNV+RAL+KRLD + E ++ + IPRA+P+VY LD DM P+ A++ P+S R+LA+ Q+
Sbjct: 101 LQQPFAQ----VVLLRHGESTWNEQNIFTGWKDVGLTDRGIQEARDVGKVMNKHGL-EFDMVYTSLLKRAIKTSALTLDTMDQSFVEVRKDWRLNEQMYGALEGRNKKACVKEHGYEQVQKWRRGYHTAPPPNKKQNGYFPD-DPQYAQFTDLDAPDSWCGSPGTESLKDTQARVWSLWRKEIMPNIKSGKRVLVCCHGNVLRALMKRLDNISIETIQSIDIPRAMPIVYTLDKDMNPIMTAKSSFPISGRFLADKSQL 353
BLAST of jgi.p|Trimin1|352815 vs. uniprot
Match: B7GEI2_PHATC (Phosphoglycerate mutase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GEI2_PHATC) HSP 1 Score: 229 bits (583), Expect = 4.850e-69 Identity = 115/255 (45.10%), Postives = 162/255 (63.53%), Query Frame = 1
Query: 67 KYRVIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGDVDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVRAAQAMGPLSARYLANPGQIAARM 831
KY ++ +RHGEST+N E RF GW D PLS GEEEA GQLLRE G D+ + S LKR+IKT WIV EE+ ++P++++WRLNE+ YGAL+GL K++ +HG + +WRRSYDI PP + YFP DP Y D+ +D P++ ESLK T+ R W++ + P ++G L+ AHGN +RAL+K LD + E + + IP VPLVYELD +++P+ A+ PLS YL + ++ R+
Sbjct: 52 KYTLVLVRHGESTWNKENRFTGWVDCPLSEAGEEEAHKGGQLLREGGY-HFDKAYTSTLKRAIKTLWIVLEEMDLMYLPITNNWRLNERHYGALQGLNKQETVDKHGKDQVLEWRRSYDIPPPDIDEDSEYFPGNDPMYKDVPKEDLPKA-------ESLKLTEERFMSWWEDTLVPEIKSGTKILIAAHGNTLRALVKHLDNISPEDITGLNIPTGVPLVYELDEELKPIPHKDAIAPLSGHYLGDQEEVRNRI 298
BLAST of jgi.p|Trimin1|352815 vs. uniprot
Match: A0A6U1NFE0_9STRA (Phosphoglycerate mutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NFE0_9STRA) HSP 1 Score: 222 bits (565), Expect = 5.650e-67 Identity = 118/264 (44.70%), Postives = 164/264 (62.12%), Query Frame = 1
Query: 64 AKYRVIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGDVDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVRAAQAMGPLSARYLANPGQIAARMKLESNEAQ 855
A Y+++ +RHGES +N RF GW D L+ G+ EA AG+LL+E G + D + S LKR+I T W E + + IPV+ +W LNE+ YGAL+GL K++ +HG+E WRRSYDI PP + Y+P D +YA LT+D P TESLK T+ R W + IAP +AG+T L+ AHGN +RAL+KRLD + A+ + + IP AVPLVYELDAD+ P+ A+GPL RYL + + AR++ N+ +
Sbjct: 2 ATYKMVLIRHGESEWNMTNRFTGWTDVSLTEKGKAEAVEAGRLLKEEGW-EFDCAYTSMLKRAIDTCWTCLEGVDQMWIPVTRNWMLNERHYGALQGLNKQETVDKHGIEQVTVWRRSYDIPPPPCDKSSEYYPGNDRRYAGLTEDQIP-------LTESLKLTEDRVAIYWDQEIAPAIKAGKTILIAAHGNSLRALVKRLDNISADDITGLNIPTAVPLVYELDADLNPIAHPDAIGPLKGRYLGDQEAVRARIEGVKNQTK 257
BLAST of jgi.p|Trimin1|352815 vs. uniprot
Match: W7TKJ0_9STRA (Phosphoglycerate mutase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKJ0_9STRA) HSP 1 Score: 224 bits (571), Expect = 7.600e-67 Identity = 122/276 (44.20%), Postives = 169/276 (61.23%), Query Frame = 1
Query: 61 EAKYRVIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGDVDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVRAAQAMGPLSARYLANPGQIAARMKLESNEAQ-----LGLHVP 873
+ KY+++ +RHGEST+N E RF GW D PLS G +EA AG+ L+E L D + S L+R+I T W+ EEL IPV +WRLNE+ YGAL+GL K++ +HG+E WRRSYDI PP V + ++P DPKYAD+ P TESLK T+AR LW+ I P +AG+ ++ AHGN IRAL++ LD + + + + +P VPL+YELD +M+P++ A A+ PL YL + +I R K+E AQ LG H+P
Sbjct: 61 DKKYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLR-FDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPV-------TESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKI--RAKIEGVAAQTGGKKLGNHLP 326
BLAST of jgi.p|Trimin1|352815 vs. uniprot
Match: A0A534PS58_9DELT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534PS58_9DELT) HSP 1 Score: 221 bits (563), Expect = 7.970e-67 Identity = 113/231 (48.92%), Postives = 150/231 (64.94%), Query Frame = 1
Query: 70 YRVIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGDVDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVR 762
++++ +RHG+S +N E RF GW D PLSA GE EA AGQLL+E L + + S LKR+IKT WI +EL + IPV + WRLNE+MYGAL+GL K + AR HG WRRS+DIAPP +P +P DP+YADL ++ P TESLK T AR W++ IAP R G+ L+ AHGN +RAL+K LD +G + ++ IP +PLVYELD ++RP+R
Sbjct: 2 HKLVLLRHGQSAWNKENRFTGWVDVPLSAAGEAEAHEAGQLLKEASLS-FEVAYTSLLKRAIKTLWIALDELDQMWIPVKNSWRLNERMYGALQGLDKAETARRHGEAQVHIWRRSFDIAPPPLPKEDPMWPGRDPRYADLRPEEVPV-------TESLKSTVARFLPYWEQEIAPAVRKGKRVLISAHGNSLRALVKHLDKIGDAEIAELNIPTGIPLVYELDEELRPMR 224
BLAST of jgi.p|Trimin1|352815 vs. uniprot
Match: A0A7R9W4J4_9STRA (Phosphoglycerate mutase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4J4_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.180e-66 Identity = 116/259 (44.79%), Postives = 163/259 (62.93%), Query Frame = 1
Query: 55 TVEAKYRVIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGDVDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVRAAQAMGPLSARYLANPGQIAARM 831
++E K+ V+ +RHGEST+N E F GW D PLS G EEA+ G+LL++ G D + S LKR+IKT WI+ EE+ +IP+ + WRLNE+ YGAL+GL K++ +HG + WRRSYD+ PP V + P DP+YA + DD TESLK T+ R W++ I P+ +AG+ L+ AHGN +RAL+K LDG+ E + ++ IP VPLVYELD D++P+ A+ PL RYL + +I AR+
Sbjct: 60 SLEMKHTVVLVRHGESTWNKENLFTGWVDVPLSDKGREEAQAGGELLKDGGF-TFDLCYTSTLKRAIKTLWIILEEMDLMYIPIVNTWRLNERHYGALQGLNKQETVAKHGKDQVLIWRRSYDVPPPTVDRDSEHHPCNDPRYAGVEFDDE--------FTESLKLTEERFMPDWEDVIGPQIKAGKKVLIAAHGNTLRALVKHLDGISEEEICELNIPTGVPLVYELDDDLKPIPQEDAIAPLQGRYLGDQEEIRARI 309
BLAST of jgi.p|Trimin1|352815 vs. uniprot
Match: A0A2W4LL71_9PROT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4LL71_9PROT) HSP 1 Score: 220 bits (560), Expect = 2.390e-66 Identity = 114/231 (49.35%), Postives = 149/231 (64.50%), Query Frame = 1
Query: 70 YRVIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGDVDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVR 762
++++ +RHG+S +N E RF GW D PLS LG EEAR A +L+R+ GLG D + S LKR+IKT WIV EEL IPV WR NE+MYGAL+GL K + A HG E + WRRSYD+ PP + + Y+P DP+YA + ++ P RTE LKDT R LW+ IAP R G L+ AHGN +RAL+K LDG+ E + ++ IP +PLVYELD +RP+R
Sbjct: 2 HKLVLLRHGQSQWNQENRFTGWVDVPLSPLGVEEAREAARLIRDAGLG-FDVAYTSVLKRAIKTLWIVLEELDLMWIPVVRSWRANERMYGALQGLNKAETAARHGEEQVKIWRRSYDVPPPPLDESHEYWPGKDPRYARVPREELP-------RTECLKDTVRRFLPLWESDIAPAIRRGERVLIAAHGNSLRALVKHLDGISDEDIVELNIPTGIPLVYELDDALRPIR 224 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352815 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14017 ID=mRNA_14017|Name=jgi.p|Trimin1|352815|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1174bp|location=Sequence derived from alignment at Contig_133:41321..43598- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACGCTGAGCTCTCATCCTGAGGTAGCGGAGGCGCTGGCGCTGGAGCAback to top protein sequence of jgi.p|Trimin1|352815 >Trimin1|352815|estExt_Genemark1.C_Ctg_1330006 ID=Trimin1|352815|estExt_Genemark1.C_Ctg_1330006|Name=jgi.p|Trimin1|352815|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=323bp MTLSSHPEVAEALALEQPTVEAKYRVIFMRHGESTYNAEGRFIGWADPPLback to top mRNA from alignment at Contig_133:41321..43598- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14017 ID=mRNA_14017|Name=jgi.p|Trimin1|352815|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2278bp|location=Sequence derived from alignment at Contig_133:41321..43598- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_133:41321..43598- >mRNA_14017 ID=mRNA_14017|Name=jgi.p|Trimin1|352815|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=969bp|location=Sequence derived from alignment at Contig_133:41321..43598- (Tribonema minus UTEX_B_3156 )back to top |