Trimin1|352812|estExt_Genemark1.C_Ctg_1330002 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352812
Unique NameTrimin1|352812|estExt_Genemark1.C_Ctg_1330002
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length290
Homology
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A835ZDC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDC0_9STRA)

HSP 1 Score: 531 bits (1368), Expect = 6.120e-190
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query:    1 MAELMPTRDPTALTGMVIVQTSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAIDAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKARF 289
            MAELMPTRDPTALTGMVIVQTSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAIDAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKARF
Sbjct:    1 MAELMPTRDPTALTGMVIVQTSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAIDAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKARF 289          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A7S2EGA5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EGA5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.550e-18
Identity = 83/270 (30.74%), Postives = 126/270 (46.67%), Query Frame = 0
Query:   21 TSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLA-GTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLL-RRQLRLARPALGTAMIEFNEADFENLLVHPAVRC-APLGGGGGRAFHFARGDCAIDAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKA 287
            TS LI  +AV  +K  +  +   V C+V  ++ D+L  G V    + GR W+SPLGLTCR+I+A+V T  +D   ++ RR+L L  PA G AMI  ++ADF   + HP ++  AP          F   D  IDAA   +T  G   G   R QL+R +G G  A+ ++             P   V                Q+   + A  E  L + +  +F  +  +LDG  L + DM   + ++   V L L++V+ + P  G A
Sbjct:   58 TSTLISQLAVVALKRRLAQQT-AVNCNVSGSSSDLLMRGEVGPVTVAGRRWRSPLGLTCRAIEAKVQTCQLDMGAVISRRKLILTVPAKGDAMIAMDDADFMGFITHPLMKPPAPPSTINAELITFVSEDVEIDAATGAITFYGLYMGERWRCQLKRGSGNGKGASIIVTHA----------PSRGV--------------QSQKDNNKFALMEPELTSTMTDFFNEMVFELDGTFLSFRDMMVTQRSEVPIVMLSLDIVVKKFPSPGLA 302          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A7S2HM10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HM10_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 8.950e-15
Identity = 58/157 (36.94%), Postives = 85/157 (54.14%), Query Frame = 0
Query:   21 TSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLA-GTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLL-RRQLRLARPALGTAMIEFNEADFENLLVHPAVRC-APLGGGGGRAFHFARGDCAIDAAARTVTMAGTLDGAHARVQLRR 174
            TS LI  +A+  +K+ + ++   V C+V  ++ D+L  G+V    + GR WQSPLGLTCR+I+A V    +D   ++ RR+L L  PA G AMI  N+ADF + + HP ++  +P       A  F      +DA   TVT  G       R +LRR
Sbjct:   46 TSTLISQLAIVALKLRLADQA-AVKCNVNGSSTDLLMRGSVGPVTVSGRKWQSPLGLTCRAIEATVQNCQLDMGAIVSRRKLVLNVPAEGDAMIAMNDADFGSFITHPLMKPPSPPSNANAEAIKFLNEGVKVDAETGTVTFYGLYMNERWRCELRR 201          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A7S1HGK6_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HGK6_HEMAN)

HSP 1 Score: 80.1 bits (196), Expect = 3.420e-14
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0
Query:   43 TVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRR-QLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGG 136
            TV  SV S + ++L G V G  + G NW+SP GLTCR + A+VG   +D + LL++ ++ L+RPALG+  + F+  DF N L HP +  A +  G
Sbjct:   12 TVGVSVDSPSEELLQGQVRGVEVLGTNWESPRGLTCRDLMAKVGETGIDTEALLKKGRIDLSRPALGSCEVVFDSQDFANFLAHPRISKASIPAG 106          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A7S2UAU9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAU9_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.010e-13
Identity = 50/147 (34.01%), Postives = 79/147 (53.74%), Query Frame = 0
Query:   21 TSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLA-GTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLL-RRQLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAIDAAARTVTMAGTLDG 165
            TS LI  +A+  +++ ++ ++  V C+VQ  + D+L  G V    + G+ W SPLGLTCR+I+A VG   +D   ++ +R+LRL  PA G AMI     DF N + HP ++   + G   +   F +    +D    +V   GT  G
Sbjct:  126 TSSLISQLAIVALQLRLK-QNSGVECNVQGKSADLLLKGKVGPVTVRGKGWGSPLGLTCRAIEATVGQCDLDLGSIVSKRKLRLTVPAKGEAMIALTAEDFGNFITHPLMKAPAVPGSAEKGVQFCKEGVVVDPETGSVIFMGTTHG 271          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A7S2EIJ9_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EIJ9_TRICV)

HSP 1 Score: 79.0 bits (193), Expect = 3.960e-13
Identity = 83/270 (30.74%), Postives = 117/270 (43.33%), Query Frame = 0
Query:   21 TSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDM-LAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLL-RRQLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAIDAA-ARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKA 287
            TS LI  +AV  +K+ +  +   V C V   A D+ L G V    + GR W+SPLGLTCR+I+A V    +D   ++ RR+L L  PALG AMI  N ADF N + HP +R   L         F +    IDA     VT      G   +  L RD                 A + A+  V+ V             P++ ++          L   ++ YF  LT++LDG  L Y DM         +V L L++ + + P  G A
Sbjct:  101 TSSLISQLAVVALKLRLAAQSG-VKCDVTGAASDLILKGEVGPVTVRGRGWESPLGLTCRAIEATVRKCHLDMGSVVSRRKLVLTTPALGDAMIAMNGADFANFITHPLMRPPSLLA---EPLQFIKEGVVIDAGDGGAVTFFARHKGKQYKCFLMRDTSR-------------TATTTAK--VDVV-------------PVESEEAGDIEQISIELGEVLSDYFNQLTVELDGTFLSYRDMMVTAKGGSPSVMLALSIRVKKFPSPGLA 338          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A448Z6R5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6R5_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 5.720e-13
Identity = 73/269 (27.14%), Postives = 125/269 (46.47%), Query Frame = 0
Query:   21 TSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQ-LRLARPALGTAMIEFNEADFENLLVHPAVR--CAPLGGGGGRA-FHFARGDCAIDAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVG 285
            TS LI ++A   +K  + ++ H V C + + + ++L G V    + GR WQSPLGLTCR+I+A V   T+D   ++  Q L L  PA G AM+  +  DF N + HP ++    P+      +   F + + +I+ +   +   GT  G+  + +L+R+   GA  A++    L  +     R V+  A                         E++LA   +++F  +  +LDG  L + DM      +E +V L L + + + P  G
Sbjct:   67 TSTLISTLACMALKKRLVDQTH-VSCDLTAESNNLLFGRVGPVTVRGRGWQSPLGLTCRAIEATVNECTLDMGRVVTNQKLVLTTPAEGQAMVALSATDFGNFITHPLMKPPSPPVNSDRSNSRLVFQKENVSINPSTGLIIFYGTYAGSEWKFELQRNT-RGAEKAKI-DATLVESRGTDERDVDVDAM------------------------EKSLALTTSKFFNDMVFELDGTFLSFEDMMLTDKGRESSVMLSLRIKVKKFPSPG 308          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A835W822_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W822_CHLIN)

HSP 1 Score: 78.6 bits (192), Expect = 6.970e-13
Identity = 49/110 (44.55%), Postives = 61/110 (55.45%), Query Frame = 0
Query:   38 RNRDH-TVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQ-LRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFAR 145
            R R H  V   VQ+N  DMLAG V+GAA+ GR W+SPLGLT R +D  VG + +D    L++Q + L    LG A + F+  DF   L HP VR A      G  F F R
Sbjct:   17 RLRSHGRVAVRVQANGWDMLAGRVDGAAVEGRMWESPLGLTARILDVEVGRVELDLAAALQQQRIALRNVPLGAARVVFSGPDFGAFLQHPLVRAAAARAVQGLPFTFDR 126          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A835WZN9_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WZN9_9CHLO)

HSP 1 Score: 75.9 bits (185), Expect = 5.320e-12
Identity = 53/137 (38.69%), Postives = 73/137 (53.28%), Query Frame = 0
Query:   25 IESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQ-LRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAIDAAARTVTMA 160
            +E+VA   ++  +R+    V   + +N  DMLAG VEGAA+ GR W+SPLGLT R +D  VG + +D    L++Q + L    LG A + F+  DF   L HP VR A      G  F F R    +  +A T T A
Sbjct:    6 VEAVAAAALRARLRSHGR-VSVRLAANGWDMLAGRVEGAAVEGRLWESPLGLTARILDVEVGRVELDLGAALQQQRIVLRNTPLGAARVVFSGPDFGAFLQHPLVRAAAARAVQGLPFSFDREVLVLPPSAGTGTGA 141          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A7S0GM09_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GM09_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.460e-11
Identity = 75/269 (27.88%), Postives = 118/269 (43.87%), Query Frame = 0
Query:   22 SRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDM-LAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVD-PQGLLRRQLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLG-GGGGRAFHFARGDCAIDAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKA 287
            S +I  +AV  +K  + +  H V C V ++   + L G V    + G+ W+SPLGLTCR+I+A V   ++D  + L +R+LRL  PA G AM+    ADF + + HP ++   L   G    F F +    ID  A  V   G   G   R  L+R+  +G    +V              P+  ++               +       A  +AL   +  +F  LT +LDG  L + DM      +E  V + L +++ + P  G A
Sbjct:   72 SNIIPQLAVFALKRRLADEAH-VACDVTADPTRIALQGKVGPVTVKGKGWKSPLGLTCRAIEATVNECSLDFVEVLQKRKLRLTVPAEGNAMVALTGADFGSFVTHPLLKPPRLTMNGRSHPFQFLKDGVLIDPNAGEVRFFGMFQGERWRCILKRNR-DGKAEIKVF-------------PINNISS-----------VDDEDNVANKLAISKALTKIITIFFNNLTFELDGTFLSFQDMMVTDRGRESCVMISLKILVKKFPSTGIA 314          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A835ZDC0_9STRA6.120e-190100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2EGA5_9STRA1.550e-1830.74Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2HM10_9STRA8.950e-1536.94Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S1HGK6_HEMAN3.420e-1442.11Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S2UAU9_9STRA1.010e-1334.01Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2EIJ9_TRICV3.960e-1330.74Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A448Z6R5_9STRA5.720e-1327.14Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A835W822_CHLIN6.970e-1344.55Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A835WZN9_9CHLO5.320e-1238.69Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A7S0GM09_9STRA2.460e-1127.88Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_133contigContig_133:19696..21472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352812mRNA_14013Tribonema minus UTEX_B_3156 mRNAContig_133 19696..21853 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352812|estExt_Genemark1.C_Ctg_1330002 ID=Trimin1|352812|estExt_Genemark1.C_Ctg_1330002|Name=jgi.p|Trimin1|352812|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=290bp
MAELMPTRDPTALTGMVIVQTSRLIESVAVTIVKMLMRNRDHTVYCSVQS
NAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQL
RLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAI
DAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRP
VEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLD
GVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKARF*
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