mRNA_13622 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|143231
Unique NamemRNA_13622
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|143231 vs. uniprot
Match: A0A835ZF75_9STRA (BHD_3 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF75_9STRA)

HSP 1 Score: 290 bits (743), Expect = 2.050e-99
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
Query:    1 DVPLYGHWQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLNPQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAVMAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQYGH 438
            DVPLYGHWQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLNPQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAVMAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQYGH
Sbjct:    1 DVPLYGHWQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLNPQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAVMAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQYGH 146          
BLAST of jgi.p|Trimin1|143231 vs. uniprot
Match: A0A7S3ST52_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3ST52_EMIHU)

HSP 1 Score: 109 bits (273), Expect = 9.020e-28
Identity = 66/142 (46.48%), Postives = 84/142 (59.15%), Query Frame = 1
Query:   10 LYGHWQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLNPQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAVMAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQYG 435
            LY  WQT  Y PP A+ GV+PR+ E G V++W+     LP GT +L     A HVAAAA+ LGVDCAPA VGF F+ GR VP+  G +VC+E A  ++ AA  +AE    K   +  +  L +W  LL  L  R RL  QYG
Sbjct:   20 LYAEWQTYAYEPPAAIGGVVPRS-ERGHVEMWS--EKHLPLGTKWLR----APHVAAAAKKLGVDCAPAMVGFDFRDGRSVPRFDGVIVCEEAAPLLVEAAAGIAEAEEDKLSRKLRRRALGQWATLLNALRLRARLEAQYG 154          
BLAST of jgi.p|Trimin1|143231 vs. uniprot
Match: A0A1B6IBJ9_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6IBJ9_9HEMI)

HSP 1 Score: 107 bits (267), Expect = 3.220e-26
Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 1
Query:    4 VPLYGHWQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLNPQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAVMAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQYG 435
            +PL+GHWQ E Y PPPAV+G +PRN EYG V+L+     +LPAGTV+L   +    +A  AR LG+DCAPA VG+ F  G   P + GF+VC+E    ++ A +   +++  +++ + E  V   WKRL++ LL R RL+ +Y 
Sbjct:   61 LPLFGHWQVEDYIPPPAVDGKVPRN-EYGNVELYKPC--MLPAGTVHLQVPQ----LARVARKLGIDCAPAVVGWEFSGGGSHPVLDGFIVCEEFKETLLDAWDKEMDESAKRSKEKLEAKVYGNWKRLIKGLLIRERLKTRYN 197          
BLAST of jgi.p|Trimin1|143231 vs. uniprot
Match: UPI001EE9F1B6 (DNA repair protein complementing XP-C cells homolog n=1 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EE9F1B6)

HSP 1 Score: 107 bits (267), Expect = 9.030e-25
Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 1
Query:    4 VPLYGHWQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLNPQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAVMAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQYG 435
            +PL+GHWQ E Y PPPAV+G +PRN EYG V+L+     +LPAGTV+L   +    +A  AR LG+DCAPA VG+ F  G   P + GF+VC+E    ++ A +   +++  +++ + E  V   WKRL++ LL R RL+ +Y 
Sbjct:  254 LPLFGHWQVEDYIPPPAVDGKVPRN-EYGNVELYKPC--MLPAGTVHLQVPQ----LARVARKLGIDCAPAVVGWEFSGGGSHPVLDGFIVCEEFKETLLNAWDKEMDESAKRSKEKLEAKVYGNWKRLIKGLLIRERLKTKYN 390          
BLAST of jgi.p|Trimin1|143231 vs. uniprot
Match: UPI000995B6A2 (DNA repair protein complementing XP-C cells homolog n=1 Tax=Pseudomyrmex gracilis TaxID=219809 RepID=UPI000995B6A2)

HSP 1 Score: 106 bits (265), Expect = 5.650e-24
Identity = 66/141 (46.81%), Postives = 89/141 (63.12%), Query Frame = 1
Query:   10 LYGHWQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLNPQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAVMAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQY 432
            L+G WQT  Y PP A NG++PRN EYG+VDL+     +LP GTV++N   G + +A   R L +DCAPA VGF FKS   VP ++GFVVC E+   +  A EA   +A  +   +REK +   WKRL++ LL R +L Q+Y
Sbjct:  756 LFGEWQTTEYVPPEAKNGIVPRN-EYGSVDLFK--ECMLPKGTVHIN-LPGLNRIA---RKLNIDCAPAVVGFNFKSVGAVPAVEGFVVCAEYEDTLREAWEAEQVEASRRTAEKREKRIYGNWKRLIKGLLIREKLSQKY 889          
BLAST of jgi.p|Trimin1|143231 vs. uniprot
Match: R1D5Y6_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D5Y6_EMIHU)

HSP 1 Score: 105 bits (261), Expect = 1.630e-23
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 1
Query:   22 WQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLNPQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAVMAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQYG 435
            WQT  Y PP A+ GV+PR+ E G V++W+     LP GT +L     A HVAAAA+ LGVDCAPA VGF F+ GR VP+  G +VC+E A  ++ AA  +AE    K   +  +  L +W  LL  L  R RL  QYG
Sbjct:  435 WQTYAYEPPAAIGGVVPRS-ERGHVEMWS--EKHLPLGTKWLR----APHVAAAAKKLGVDCAPAMVGFDFRDGRSVPRFDGVIVCEEAAPLLVEAAAGIAEAEEDKLSRKLRRRALGQWATLLNALRLRARLEAQYG 565          
BLAST of jgi.p|Trimin1|143231 vs. uniprot
Match: A0A7K6AXR4_UPUEP (XPC protein (Fragment) n=2 Tax=Upupiformes TaxID=57389 RepID=A0A7K6AXR4_UPUEP)

HSP 1 Score: 102 bits (254), Expect = 1.980e-23
Identity = 63/145 (43.45%), Postives = 88/145 (60.69%), Query Frame = 1
Query:    1 DVPLYGHWQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLNPQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAVMAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQYG 435
            D+PL+GHWQTE Y+PP AV+G +PRN EYG V L+   +++LP G V+L       ++   AR LG+DCA A  GF F  G   P   G++VC+E+   ++AA E    +   K + +REK  L  WK L + LL R RL+Q+Y 
Sbjct:  107 DLPLFGHWQTEEYQPPVAVDGKVPRN-EYGNVYLFV--QSMLPIGCVHLR----LPNLNRVARKLGIDCAQAITGFDFHGGYSHPVTDGYIVCEEYKEVLIAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYS 244          
BLAST of jgi.p|Trimin1|143231 vs. uniprot
Match: W5N634_LEPOC (Xeroderma pigmentosum, complementation group C n=3 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5N634_LEPOC)

HSP 1 Score: 103 bits (258), Expect = 4.950e-23
Identity = 63/145 (43.45%), Postives = 89/145 (61.38%), Query Frame = 1
Query:    1 DVPLYGHWQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLNPQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAVMAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQYG 435
            D+PL+GHWQTE Y+PP AV+G +PRN EYG V L+     +LP G V+L       ++   AR L +DCAPA  GF F  G   P ++G+V C+E+   ++AA E    +   K + +REK VL  W  L++ LL R RL+++YG
Sbjct:  718 DLPLFGHWQTEEYQPPVAVDGKVPRN-EYGNVYLFRPC--MLPIGCVHLQ----VPNLHRVARKLNIDCAPAVTGFDFHCGFSHPVIEGYVACEEYKEVLLAAWENEQAELEKKEREKREKRVLSNWTLLVKGLLIRERLKRRYG 855          
BLAST of jgi.p|Trimin1|143231 vs. uniprot
Match: UPI001884E179 (DNA repair protein complementing XP-C cells homolog n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884E179)

HSP 1 Score: 103 bits (257), Expect = 6.870e-23
Identity = 64/144 (44.44%), Postives = 88/144 (61.11%), Query Frame = 1
Query:    4 VPLYGHWQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLNPQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAVMAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQYG 435
            +P++G WQTE Y PP A  GV+PRN  YG V+L+    ++LP GTV+L   +G S VA   + LG+DCAPA VG+ +  G   P  +G+VVC+E    +M A E    +AR + + R EK VL  W+RL + LL R RL  +Y 
Sbjct:  735 LPVFGRWQTEQYVPPTAEGGVVPRN-AYGNVELFKP--SMLPGGTVHL-AVDGLSRVA---KKLGIDCAPAMVGWDYHCGGSHPVFEGYVVCEEFQDTLMEAWEQEQREARRRQRERHEKRVLDNWRRLTRGLLIRQRLANKYS 871          
BLAST of jgi.p|Trimin1|143231 vs. uniprot
Match: A0A6A4VZL4_AMPAM (DNA repair protein complementing XP-C cells n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VZL4_AMPAM)

HSP 1 Score: 103 bits (256), Expect = 9.030e-23
Identity = 66/146 (45.21%), Postives = 92/146 (63.01%), Query Frame = 1
Query:    1 DVPL--YGHWQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLNPQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAVMAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQY 432
            D PL  +G WQT  Y PP A  G +PRN +YG V+L+    ++LP GTV+LN  EG S VA   + LG+DCAPA VG+ +  G   P  +G+VVC+E    +M A EA   +AR + + +REK +L  W+RL++ LL R RL ++Y
Sbjct:  583 DKPLEVFGRWQTAEYVPPRAEGGKVPRN-DYGNVELFKP--SMLPGGTVHLNV-EGLSRVA---KRLGIDCAPAMVGWDYHCGGSHPVFEGYVVCEEFEDTLMDAWEADQREARRRQREKREKRILDNWRRLVRGLLIRQRLARKY 721          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|143231 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZF75_9STRA2.050e-99100.00BHD_3 domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S3ST52_EMIHU9.020e-2846.48Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A1B6IBJ9_9HEMI3.220e-2643.06Uncharacterized protein (Fragment) n=1 Tax=Homalod... [more]
UPI001EE9F1B69.030e-2543.06DNA repair protein complementing XP-C cells homolo... [more]
UPI000995B6A25.650e-2446.81DNA repair protein complementing XP-C cells homolo... [more]
R1D5Y6_EMIHU1.630e-2346.38Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A7K6AXR4_UPUEP1.980e-2343.45XPC protein (Fragment) n=2 Tax=Upupiformes TaxID=5... [more]
W5N634_LEPOC4.950e-2343.45Xeroderma pigmentosum, complementation group C n=3... [more]
UPI001884E1796.870e-2344.44DNA repair protein complementing XP-C cells homolo... [more]
A0A6A4VZL4_AMPAM9.030e-2345.21DNA repair protein complementing XP-C cells n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_131contigContig_131:187422..189865 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|143231|gw1.131.34.1
BRITEko00000,ko00001,ko03400
KEGG Pathwayko03420,map03420
KEGG koko:K10838
GOsGO:0000109,GO:0000111,GO:0000217,GO:0000404,GO:0000405,GO:0000715,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006294,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007346,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009987,GO:0010564,GO:0016020,GO:0016043,GO:0022607,GO:0030983,GO:0031974,GO:0031981,GO:0032135,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034644,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051276,GO:0051716,GO:0051726,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070911,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071824,GO:0071840,GO:0071942,GO:0071944,GO:0090304,GO:0097159,GO:0104004,GO:1901360,GO:1901363,GO:1901987,GO:1901990,GO:1990391
Preferred nameRAD4
Descriptionmismatch repair
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5535@1|root,KOG2179@2759|Eukaryota
Evalue2.67e-24
Seed ortholog2903.EOD04119
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRad4 beta-hairpin domain 2
Ec32 orthologEc-06_007410.1
TranscriptId143553
TrackFilteredModels1
ProteinId143231
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|143231gene_13622Tribonema minus UTEX_B_3156 geneContig_131 187422..189865 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|143231Trimin1|143231|gw1.131.34.1Tribonema minus UTEX_B_3156 polypeptideContig_131 187422..189865 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13622_3exon_13622_3Tribonema minus UTEX_B_3156 exonContig_131 187422..187577 -
exon_13622_2exon_13622_2Tribonema minus UTEX_B_3156 exonContig_131 188361..188423 -
exon_13622_1exon_13622_1Tribonema minus UTEX_B_3156 exonContig_131 189647..189865 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13622CDS_13622Tribonema minus UTEX_B_3156 CDSContig_131 189647..189865 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13622 ID=mRNA_13622|Name=jgi.p|Trimin1|143231|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=438bp|location=Sequence derived from alignment at Contig_131:187422..189865- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GACGTACCCCTCTACGGCCACTGGCAAACGGAGCCGTACCGCCCGCCGCC
GGCAGTCAATGGCGTCATCCCGCGCAATCCCGAGTACGGCACCGTGGACC
TGTGGAACGGCGACCGGAACCTTCTTCCGGCCGGAACGGTCTACCTGAAC
CCCCAGGAGGGGGCGTCGCACGTCGCGGCGGCGGCGCGCGCGCTCGGCGT
GGACTGCGCCCCCGCCAAGGTGGGGTTCGCGTTCAAGAGCGGCCGCGGCG
TGCCGCAGATGCAGGGCTTTGTGGTGTGCCAGGAGCACGCCGTCGCCGTG
ATGGCGGCGGCCGAGGCGCTGGCGGAGGACGCGCGCGGCAAGGCGCAGGC
GCGGCGCGAGAAGGCAGTGCTCAAGCGCTGGAAGCGGCTCCTGCAGCACC
TGCTCAAGCGCATGCGCCTGCGCCAGCAGTACGGGCAC
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protein sequence of jgi.p|Trimin1|143231

>Trimin1|143231|gw1.131.34.1 ID=Trimin1|143231|gw1.131.34.1|Name=jgi.p|Trimin1|143231|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=146bp
DVPLYGHWQTEPYRPPPAVNGVIPRNPEYGTVDLWNGDRNLLPAGTVYLN
PQEGASHVAAAARALGVDCAPAKVGFAFKSGRGVPQMQGFVVCQEHAVAV
MAAAEALAEDARGKAQARREKAVLKRWKRLLQHLLKRMRLRQQYGH
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mRNA from alignment at Contig_131:187422..189865-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13622 ID=mRNA_13622|Name=jgi.p|Trimin1|143231|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2444bp|location=Sequence derived from alignment at Contig_131:187422..189865- (Tribonema minus UTEX_B_3156 )
GACGTACCCCTCTACGGCCACTGGCAAACGGAGCCGTACCGCCCGCCGCC GGCAGTCAATGGCGTCATCCCGCGCAATCCCGAGTACGGCACCGTGGACC TGTGGAACGGCGACCGGAACCTTCTTCCGGCCGGAACGGTCTACCTGAAC CCCCAGGAGGGGGCGTCGCACGTCGCGGCGGCGGCGCGCGCGCTCGGCGT GGACTGCGCCCCCGCCAAGGTCCGCAGCAGCGCTCACCATGTTTACTGAT TGTTGGCAGCAGTCACCACGGTCGTGAACTGTCAGCATCGCTGTTCGCAT GCATTGAGTGTCAGCGGCGGTCAGCACGATCGCCGGTGGTAGCTATATCT GCGGCGCTCAACGCGTTCATCGATTGTCAGCAGCGCTCATCATGTTCATT GATGGTCGGCAGCGCTCACCATGCTCACTCTTAGCGCCCACCACATTTAC TCATCACGTTCACTCATCGTGAGCAACACACACCATACTTGAATTATTCA TAAGGGTTTTTGTATGTGTGTCAACAATATCGGCGGCAATATCGGCACGT TCATCAGTTGCCAGCAGTGCTCACTATGTTCACTGAACAACACCTGGACA TTAGCTCTGCTCAACGTCAGCCACGTTCAACAGAAGTCACAAGTGTGTCA GCAGTGTTGACCGTGTCCTCTGGAGCAGGCAACTCAGGATTTGGGGGAGG AGAGGGCGAGCAGCGCTCGCACATAGAACCACAACAATTTTAATATTTTT TGTAGTTCCTGACAAAAAATTGATTTTTTAGTACTTCCTGACAACAGGTT GTAGAGGAAAAAAAAATCCCCAAAAAGTAAGCGCATGTTTTTCAATTTGA GGGAAAAATGGTACAAAACCGCGCGTTTCGTAATTAATTCAAAAAATGTC ATGATGATTACTTTCAAGTATGTTTTTGAAAAAATAATTGCCAAAAAATG AAAAAGCATGAGTGGGCGTGCGGATCGCGCACAATGCACAACCGCCGCCC GCAAGGCGTACTTCGTGTGACATCGTGACTTACCTGTGCCGTGTGCCCGT TTTCGCGGAGATACTCGCAGTCGCCGTTGTGCGCGACAGCGATGGCACTG TCGTTGTCAACATTGGGGCGCGCGACGTGCCTGCGCGCCACAGTCAGGGC TGCCAGCACCCTGACTGTGATTGGACTGTCGCGCCTGCAGCGTGAAATGT GAACTTCAACTTCATCCGCAAAGCGGCTCTCCGGGCGCATCCAGAGCAGC GCGTGGGCGCGTGCGCGATGGCATCATGCGCTTCACGGTCACCGCTTCAT AGATGTTGCCTCTTGTGATCGGCTTCAAGACAGGTGGCGCACTTAGCATT GGCTGCGTGCTGTACTCGACAGTATGTATGTTTTGTGTGACGCAGTGCTC AGCGGAACTCCACTCTCTCCCGCCCGTGGTGCGCGCGTGCAGGTGGGGTT CGCGTTCAAGAGCGGCCGCGGCGTGCCGCAGATGCAGGGCTTTGTGGTGT GCCAGGTGCGTCACACTTGAATGTGCACATGAACCGCCGCCGCAGACAAT TCCCAGCGCACTGCACTGTTCAGCTTCGTGGCATACTGGCAGCGCATGAA GCGCCAGCGTGCAGAGCGCTGGGGAAGGAGTCCAAGTCTCGTTCTGAAGC AGAGACCGGCCGTGCAGAGACGTATGCATCATGCCATTTTGCTGGTGTCG ATTTTGCTGACATGAGCCTGCGCCTTGGCCGGAAGGGCTTACGTATGCCA TGTATTCCACTGTACACTTTTTTGTGCAAACATACTCGGTCGACCTCTAT GGTGTAGTGTACGGTGTGTTCGCCAGGGACGATGAGAAGTGGCGTAGAGC AAAGCGCAGGGACGATGAAGGGTTTTTCTGCAGCTGCATGACGCTTGGAT GAACCCATTGTGTTGTCGACAAATCGAGGAGGACAGACAGGCGCGTTTTG GTGAGCCGCACTTGGACTGGGATGGTCTGCGAGCAGCAAACTGAGCGCTG TGATTGTCACTGGGGCAGCGCTGCTCAGCAGAGACTCCGCGCACTTCAGG CGGCAGACGCGGGCGGCCGCTGCTGCGCAGCGGCTGCTTCAACGTGACGC AGCGCGCCGTCGATAGTTTGCAACCAGGTGCTGTCAAGAACATGGTATGC ATCTCGACACCAAGTGCGGCACAGTTACAGAGCAAAACGTCCCTTGCTGA AGCTTTACATCAACTCCGAGGTTTATGCTCCCTTCCTCCCCCCCCCCCCC CCCCCCCCCCCGCATTCACACACACTCATCATTAACAGGAGCACGCCGTC GCCGTGATGGCGGCGGCCGAGGCGCTGGCGGAGGACGCGCGCGGCAAGGC GCAGGCGCGGCGCGAGAAGGCAGTGCTCAAGCGCTGGAAGCGGCTCCTGC AGCACCTGCTCAAGCGCATGCGCCTGCGCCAGCAGTACGGGCAC
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Coding sequence (CDS) from alignment at Contig_131:187422..189865-

>mRNA_13622 ID=mRNA_13622|Name=jgi.p|Trimin1|143231|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=438bp|location=Sequence derived from alignment at Contig_131:187422..189865- (Tribonema minus UTEX_B_3156 )
GACGTACCCCTCTACGGCCACTGGCAAACGGAGCCGTACCGCCCGCCGCC
GGCAGTCAATGGCGTCATCCCGCGCAATCCCGAGTACGGCACCGTGGACC
TGTGGAACGGCGACCGGAACCTTCTTCCGGCCGGAACGGTCTACCTGAAC
CCCCAGGAGGGGGCGTCGCACGTCGCGGCGGCGGCGCGCGCGCTCGGCGT
GGACTGCGCCCCCGCCAAGGTGGGGTTCGCGTTCAAGAGCGGCCGCGGCG
TGCCGCAGATGCAGGGCTTTGTGGTGTGCCAGGAGCACGCCGTCGCCGTG
ATGGCGGCGGCCGAGGCGCTGGCGGAGGACGCGCGCGGCAAGGCGCAGGC
GCGGCGCGAGAAGGCAGTGCTCAAGCGCTGGAAGCGGCTCCTGCAGCACC
TGCTCAAGCGCATGCGCCTGCGCCAGCAGTACGGGCAC
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