mRNA_14357 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352746
Unique NamemRNA_14357
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352746 vs. uniprot
Match: A0A836CLY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLY7_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.660e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1
Query:    1 MTARTTAAAAALAAQMLPLAGPGPTWSAEEDDILQNVGAEKWSVVAASAPRQRPGLPRSWVKKCLDSTLERKWTS 225
            MTARTTAAAAALAAQMLPLAGPGPTWSAEEDDILQNVGAEKWSVVAASAPRQRPGLPRSWVKKCLDSTLERKWTS
Sbjct:    1 MTARTTAAAAALAAQMLPLAGPGPTWSAEEDDILQNVGAEKWSVVAASAPRQRPGLPRSWVKKCLDSTLERKWTS 75          
BLAST of jgi.p|Trimin1|352746 vs. uniprot
Match: A0A835ZCD3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD3_9STRA)

HSP 1 Score: 1558 bits (4035), Expect = 0.000e+0
Identity = 920/920 (100.00%), Postives = 920/920 (100.00%), Query Frame = 1
Query:    1 MWEGRSRNVRLVFAYSFLAGMCRSLWSATVMSTYIYLLTGSEARVGYVTGIQGTAQALAAPLGALVSDKRGRVHALRVGGAAGLLSVAATAAXXXXXXXXXXXXXXXXXXXXXXGPFAVLCCAMAAWGVTWAVADPGVEALFADCVPCGQRSGVYTAKYVLTLLSSAAGPLVSIILFVLLGDVWTTRDCAAVILVGVCLAAVPNVVLFAFRAPPPPPLLSITSGVDRAADDDLSKPLLPAHAAEDVAHDAARDCEGGSNAGGAXXXXXAPPARRSTPGSKSAAFAGGANKGAAPLRCGXXXXXXIAVPAAVALSDVMSGLASGMSIRFFPIFFMSDVGLPPVAVSAIYAVSPLLTSAAATAAQRLLAPRLGRAATTVVGISLLVLICGMRRGSGGSSAQSSAQVAALILVYLVRTALMNCSKPLTRSIIMDTPPYRDSLRAVTRRPYVVLTCACPTAAAAAAQVPPAQRARWSALESVSTAGWSGSAIVGGLLVERCGMLANFAATAALQATALAPLLYVACHEPREVGAGGXXXXXXXXXXXXXXXXXXXXXXXGGEGAALAAGCEVEIGSAAPCAIRPAGAWLLIHGANAWGAAAAPPGSTKALKPLLRPRQQVVPIRGEERDILMSRIEKELVKPYMKDVATKREARPRLLLGMNEVIRALERSAAPAGAPXXXXXXAEQCRVRVVLLSVRDVKAPHLVEHVARMARTKCVPLLVLPNASKPLSELFATKTLAAMAFRPAPEPTPNSGGRDEGSSAXXXXXXXXSDADMASALMLTRLGGALAAAGALAGGLLLRRASTLATATPPSSAFSVAYITSPTAAHARELAGKLVRERLAACVNIVPAVSSVYVWKGELQEDEEVLMMCKTRTALVKELSEFVVKNHPYEVCEVITTPILDGNPPYLKWLGESTRQPPPQS 2760
            MWEGRSRNVRLVFAYSFLAGMCRSLWSATVMSTYIYLLTGSEARVGYVTGIQGTAQALAAPLGALVSDKRGRVHALRVGGAAGLLSVAATAAXXXXXXXXXXXXXXXXXXXXXXGPFAVLCCAMAAWGVTWAVADPGVEALFADCVPCGQRSGVYTAKYVLTLLSSAAGPLVSIILFVLLGDVWTTRDCAAVILVGVCLAAVPNVVLFAFRAPPPPPLLSITSGVDRAADDDLSKPLLPAHAAEDVAHDAARDCEGGSNAGGAXXXXXAPPARRSTPGSKSAAFAGGANKGAAPLRCGXXXXXXIAVPAAVALSDVMSGLASGMSIRFFPIFFMSDVGLPPVAVSAIYAVSPLLTSAAATAAQRLLAPRLGRAATTVVGISLLVLICGMRRGSGGSSAQSSAQVAALILVYLVRTALMNCSKPLTRSIIMDTPPYRDSLRAVTRRPYVVLTCACPTAAAAAAQVPPAQRARWSALESVSTAGWSGSAIVGGLLVERCGMLANFAATAALQATALAPLLYVACHEPREVGAGGXXXXXXXXXXXXXXXXXXXXXXXGGEGAALAAGCEVEIGSAAPCAIRPAGAWLLIHGANAWGAAAAPPGSTKALKPLLRPRQQVVPIRGEERDILMSRIEKELVKPYMKDVATKREARPRLLLGMNEVIRALERSAAPAGAPXXXXXXAEQCRVRVVLLSVRDVKAPHLVEHVARMARTKCVPLLVLPNASKPLSELFATKTLAAMAFRPAPEPTPNSGGRDEGSSAXXXXXXXXSDADMASALMLTRLGGALAAAGALAGGLLLRRASTLATATPPSSAFSVAYITSPTAAHARELAGKLVRERLAACVNIVPAVSSVYVWKGELQEDEEVLMMCKTRTALVKELSEFVVKNHPYEVCEVITTPILDGNPPYLKWLGESTRQPPPQS
Sbjct:    1 MWEGRSRNVRLVFAYSFLAGMCRSLWSATVMSTYIYLLTGSEARVGYVTGIQGTAQALAAPLGALVSDKRGRVHALRVGGAAGLLSVAATAAXXXXXXXXXXXXXXXXXXXXXXGPFAVLCCAMAAWGVTWAVADPGVEALFADCVPCGQRSGVYTAKYVLTLLSSAAGPLVSIILFVLLGDVWTTRDCAAVILVGVCLAAVPNVVLFAFRAPPPPPLLSITSGVDRAADDDLSKPLLPAHAAEDVAHDAARDCEGGSNAGGAXXXXXAPPARRSTPGSKSAAFAGGANKGAAPLRCGXXXXXXIAVPAAVALSDVMSGLASGMSIRFFPIFFMSDVGLPPVAVSAIYAVSPLLTSAAATAAQRLLAPRLGRAATTVVGISLLVLICGMRRGSGGSSAQSSAQVAALILVYLVRTALMNCSKPLTRSIIMDTPPYRDSLRAVTRRPYVVLTCACPTAAAAAAQVPPAQRARWSALESVSTAGWSGSAIVGGLLVERCGMLANFAATAALQATALAPLLYVACHEPREVGAGGXXXXXXXXXXXXXXXXXXXXXXXGGEGAALAAGCEVEIGSAAPCAIRPAGAWLLIHGANAWGAAAAPPGSTKALKPLLRPRQQVVPIRGEERDILMSRIEKELVKPYMKDVATKREARPRLLLGMNEVIRALERSAAPAGAPXXXXXXAEQCRVRVVLLSVRDVKAPHLVEHVARMARTKCVPLLVLPNASKPLSELFATKTLAAMAFRPAPEPTPNSGGRDEGSSAXXXXXXXXSDADMASALMLTRLGGALAAAGALAGGLLLRRASTLATATPPSSAFSVAYITSPTAAHARELAGKLVRERLAACVNIVPAVSSVYVWKGELQEDEEVLMMCKTRTALVKELSEFVVKNHPYEVCEVITTPILDGNPPYLKWLGESTRQPPPQS 920          
BLAST of jgi.p|Trimin1|352746 vs. uniprot
Match: A0A7S3XQ92_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ92_HETAK)

HSP 1 Score: 233 bits (594), Expect = 1.930e-63
Identity = 186/541 (34.38%), Postives = 270/541 (49.91%), Query Frame = 1
Query:    7 EGRSRNVRLVFAYSFLAGMCRSLWSATVMSTYIYLLT-GSEARVGYVTGIQGTAQALAAPLGALVSDKRGRVHALRVGGAAGLLSVAATAAXXXXXXXXXXXXXXXXXXXXXXGPFAVLCCAMAAWGVTWAVADPGVEALFADCVPCGQRSGVYTAKYVLTLLSSAAGPLVSIILFVLLGDVWTTRDCAAVILVGVCLAAVPNVVLFAFRAPPPPPLLSITSGVDR--AADDDLSKPLLPAHAAEDVAHDAARDCEGGSN----------------AGGAXXXXXAPPARRSTPGS---KSAAFAGGANKGAAPLRCGXXXXXXIAVPAAVALSDVMSGLASGMSIRFFPIFFMSDVGLPPVAVSAIYAVSPLLTSAAATAAQRLLAPRLGRAATTVV----GISLLVLICGMRRGSGGSSAQSSAQVAALILVYLVRTALMNCSKPLTRSIIMDTPPYRDSLRAVTRRPYVVLTCACPTAAAAAAQVPPAQRARWSALESVSTAGWSGSAIVGGLLVERCGMLANFAATAALQATALAPL 1551
            E ++ NV+L   Y+F   + R +++  ++S YIY+LT GS  ++G VTG++G  Q L  PL    +DK  R   LR+ G  GL++                              + +LC A  +WG+   V++  VEALFAD VP G RS V++ K  LT +++AAGP +S+ILF++LGD WT+  C A + VG+ L+AVP+ +LF           + T   +   +   DL +PLL   +  D   D A D    +                 +G +     +P +    P S    + +F    N+  A  +          +PA V   D+++G+ASGMSI+FFPIFF  ++ L PV V  IY  S LLTS  +  AQR  + R GR  T ++    GIS LV+IC +       S     +   L +V++ RTALMN +K L+RSIIMD                               QVP   RA+WS+LE+ +TA WSGSA +GG+LV+R G+L NF  T+ALQA AL P+
Sbjct:   20 EFQNLNVKLTMWYTFFLYLSRGMYNQNILSAYIYILTDGSNTKIGLVTGLRGLVQVLIGPLCGYFADKYKRAIILRIAGVLGLIAAVIMIVALWIQS------------------YTLLCIAGMSWGLFGGVSNSSVEALFADSVPNGSRSKVFSYKSALTKVANAAGPALSLILFLILGDKWTSGTCLAALTVGLALSAVPSALLFFLHDRHALTAAAATGRSESKGSTQADLKQPLLEDESQADTEEDEADDSSCAAEEDVLPASKQVEAISGQSGRSMLEERSPSSMGKLPTSIQDSNLSFKPKENQYTALGKVKYSNY----IPAMVVTGDILAGIASGMSIKFFPIFFKQNLSLSPVEVQTIYIFSNLLTSLTSIVAQRF-SKRAGRGVTILLSKGLGISFLVMICLL-------SYYGFERAGILGMVFVFRTALMNGTKALSRSIIMD-------------------------------QVPKRHRAKWSSLEAFNTASWSGSAFLGGVLVDRAGILNNFYVTSALQACALVPV 499          
BLAST of jgi.p|Trimin1|352746 vs. uniprot
Match: A0A8J5X9F2_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X9F2_DIALT)

HSP 1 Score: 204 bits (520), Expect = 6.020e-52
Identity = 193/573 (33.68%), Postives = 262/573 (45.72%), Query Frame = 1
Query:   13 RSRNVRLVFAYSFLAGMCRSLWSATVMSTYIYLLTGSEARVGYVTGIQGTAQALAAPLGALVSDKRGRVHALRVGGAAGLLSVAATAAXXXXXXXXXXXXXXXXXXXXXXGPFAVLCCAMAAWGVTWAVADPGVEALFADCVPCGQRSGVYTAKYVLTLLSSAAGPLVSIILFVLLGDVWTTRDCAAVILVGVCLAAVPNVVLFAFRAPPPPPLLSITSGVDRAADDDLSKPLLPAHAAEDVAHDAARDCEGGSNAGGAXXXXXAPPARRSTPGSKSAAFAGGANKGAAPLRCGXXXXXX-------------------IAVPAAVALSDVMSGLASGMSIRFFPIFFMSDVGLPPVAVSAIYAVSPLLTSAAATAAQRLLAPRLGR----AATTVVGISLLVLICGM--------RRGSGGSSAQSSAQVAA---------------------------LILV-YLVRTALMNCSKPLTRSIIMDTPPYRDSLRAVTRRPYVVLTCACPTAAAAAAQVPPAQRARWSALESVSTAGWSGSAIVGGLLVERCGMLANFAATAALQATALAPLL 1554
            R+RN R V  YS LA   RS+W+  V+S Y++LLT S   VG +TG +G AQ   AP+    +D+  R   LR+G   GL + A                            FA LC AM  WG  WAV +P V+A+FAD V  G RS  +T K  L  L +A GP  S+ LF  LGD W+ R C A +L G+ L  +PN +L+  R     P  +  +   RAA   L++PLL A AA       A    GGS          AP  R+   GS +   +         L   XXXXXX                   + +PA V   D++  LASGMSIRFFPIF + ++ LPPVA S +              AQRL   R+GR    AA  + G +   L+  +        R  S G SA +SAQV                             LIL  Y+VR+ALMNC+  +T+S++ D                                VPP+ RAR++++++++   W+GSA +GG L++R GM+A F ATAA+QA A+ PLL
Sbjct:   21 RARNARGVLLYSLLASAGRSIWAGDVLSAYVFLLTRSTTAVGALTGARGVAQIALAPVSGYAADRAPRHVLLRLGSCVGLAAAAVAVGALSARA------------------FAPLCGAMVLWGCYWAVVNPAVDAIFADSVADGARSLWFTRKSQLMQLGNALGPATSLALFAALGDEWSARTCEANLLGGLALTLLPNALLWTMRDARDAPTRACAT---RAAAAALAEPLLAAEAA------GAARARGGSAT--RTSGDGAPSVRQQRSGSGTPQPSXXXXXXXXXLTVAXXXXXXXXXXXXXXXXXXXXXXXRVLLMPALVLSYDIVGALASGMSIRFFPIFLLRELRLPPVAASTVXXXXXXXXXXXXGGAQRL-GRRIGRVPAVAALRLCGCAAFWLMVALYASAPACARAPSDGGSAAASAQVXXXXXXXXXXTAHDAHGAATCAVRGVRLWLILTSYVVRSALMNCTGGVTKSVLHDL-------------------------------VPPSHRARYASMDTLNQGSWAGSAALGGFLIDRYGMVATFHATAAVQACAVLPLL 532          
BLAST of jgi.p|Trimin1|352746 vs. uniprot
Match: A0A8J6CDJ7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDJ7_DIALT)

HSP 1 Score: 198 bits (503), Expect = 1.480e-51
Identity = 174/531 (32.77%), Postives = 245/531 (46.14%), Query Frame = 1
Query:   19 RNVRLVFAYSFLAGMCRSLWSATVMSTYIYLLTGSEARVGYVTGIQGTAQALAAPLGALVSDKRGRVHALRVGGAAGLLSVAATAAXXXXXXXXXXXXXXXXXXXXXXGPFAVLCCAMAAWGVTWAVADPGVEALFADCVPCGQRSGVYTAKYVLTLLSSAAGPLVSIILF-VLLGDVWTTRDCAAVILVGVCLAAVPNVVLFAFRAPPPPPLLSITSGVD-RAADDDLSKPLLPAHAAEDVAHDAARDCEGGSNAGGAXXXXXAPPARRSTPGSKSAAFAGGANKGAAPLRCGXXXXXXIAVPAAVALSDVMSGLASGMSIRFFPIFFMSDVGLPPVAVSAIYAVSPLLTSAAATAAQRLLAPRLGRAATT----VVGISLLVLICGMRRGSGGSSAQSSAQVAALILVYLVRTALMNCSKPLTRSIIMDTPPYRDSLRAVTRRPYVVLTCACPTAAAAAAQVPPAQRARWSALESVSTAGWSGSAIVGGLLVERCGMLANFAATAALQATALAPLLYVACHEPREVGAG 1593
            RN  +  A SF   + RS+WS  V S ++YL++GS   VG V G++G +Q L AP    V+D R R  ALR G   G++    T+                            +C +   WG  WA A+P  +A+FAD +  G RS  +TAKY L  L+   GP +SI++F V   D+W  R C  V+ +G  LA +PN ++ A        L+ +  G D R     L+  LL      D ++ AA            XXX    PA R                      CG      +A PA V L DV+S LA+G+ IRFFPIFFM D+ L PVAVS I ++  L T+AA  +A   LA   GR        + G+   V +  +        A +SA  A +I  YLVR  L+N +  +T+SII D                                VPP+ RAR+++++S++ A W+GSA +GGL+++R GM+ANF  TA+ Q  AL P+       P E   G
Sbjct:    9 RNRLVGMAASFSGALSRSVWSGDVFSAFLYLVSGSSTHVGVVMGLRGMSQLLLAPCFGYVADTRSREAALRAGALLGVIGAILTSLAAHMRSAVG------------------MCLSQLVWGAHWAAANPSADAVFADSIFAGSRSSWFTAKYQLIQLAGVCGPAISIVVFSVHANDMWRLRTCVLVLDIGCALALIPNALILA--------LVDVRGGCDARETRGPLTAALL------DESNRAAXXXXXXXXXXXXXXXRA--PATRC---------------------CGGRL---VAAPALVLLYDVISALAAGLVIRFFPIFFMRDLALSPVAVSTI-SIGALATTAAFGSAAHALAAVAGRVPVAFSFRLAGVCSFVAMAAL--------AGASAPRAPVIAAYLVRMGLINSTFGITKSIIHDL-------------------------------VPPSHRARYASIDSINQAAWAGSAALGGLVIDRYGMVANFYVTASAQLVALVPIALARALVPDERAPG 441          
BLAST of jgi.p|Trimin1|352746 vs. uniprot
Match: B7GAV3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAV3_PHATC)

HSP 1 Score: 194 bits (493), Expect = 1.870e-49
Identity = 176/543 (32.41%), Postives = 245/543 (45.12%), Query Frame = 1
Query:    7 EGRSRNVRLVFAYSFLAGMCRSLWSATVMSTYIYLLTGSEARVGYVTGIQGTAQALAAPLGALVSDKRGRVHALRVGGAAGLLSVAATAAXXXXXXXXXXXXXXXXXXXXXXGPFAVLCCAMAAWGVTWAVADPGVEALFADCVPCGQRSGVYTAKYVLTLLSSAAGPLVSIILFVLLGDVWTTRDCAAVILVG--VCLAAVPNVVLFAFR----------APPPP-----------PLLSITSGVDRAADDDLSKPLLPAHAAEDVAHDAARDCEGGSNAGGAXXXXXAPPARRSTPGSKSAAFAGGANKGAAPLRCGXXXXXXIAVPAAVALSDVMSGLASGMSIRFFPIFFMSDVGLPPVAVSAIYAVSPLLTSAAATAAQRLLAPRLGRAATTV----VGISLLVLICGMRRGSGGSSAQSSAQVAALILVYLVRTALMNCSKPLTRSIIMDTPPYRDSLRAVTRRPYVVLTCACPTAAAAAAQVPPAQRARWSALESVSTAGWSGSAIVGGLLVERCGMLANFAATAALQATALAPLL 1554
            E  SRNV L  AY+  A   RS+W  +V++T+++LL G    VGYVT I G +Q + +     ++D   R   LR   A GLL++A T                          F  L  A+A WG  W +A+  + ALFAD +  G+RS  +T + VL  L +  GP+V+++LF LLGD WT +DCAAV+ VG  VC    P +VL  F           A  PP           P  +  + VD   +  L++PLL    A D  H       G             PP R                                AVP  VAL+D++SGL SGMSIR+FPIFF+ ++GL PV V  +Y  +PLL +     AQ L A + GR   +V    VG++ + L+         +S         +  +Y++RT+ MN +  LTRS++MD                                VPP +R +WSALESV+   WSGSA VGG+++   G+L  F  TA  Q  A  PL+
Sbjct:   56 EPPSRNVTLTLAYTAWAFAGRSIWQQSVLATWVFLLQGKLQDVGYVTAIMGISQLVVSIPAGFLADTYRRDTLLRTASAVGLLAIATTLLACHQRT------------------FHCLVIALAVWGCCWGIANTALSALFADSIRDGERSYYFTQRSVLITLGNTTGPIVALVLFKLLGDHWTIQDCAAVMAVGQIVCF---PAIVLLCFLSDDYIPTASDAVDPPDETEPARDAFLPAGTPANPVD--TNQALTQPLL----AVDTVHTPVPYVYG-----------FLPPTR--------------------------------AVPILVALADILSGLGSGMSIRYFPIFFVQNLGLGPVHVQLLYITAPLLQANLMRLAQTL-ATQFGRCRVSVAFKCVGVAFMFLMI--------ASYHWHLPTFLVCTLYILRTSCMNATSALTRSMLMDN-------------------------------VPPHERGKWSALESVNMFSWSGSAFVGGMVIGWGGILPLFIVTACGQLLATLPLV 488          
BLAST of jgi.p|Trimin1|352746 vs. uniprot
Match: A0A0L0FXR6_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FXR6_9EUKA)

HSP 1 Score: 176 bits (446), Expect = 7.420e-44
Identity = 155/519 (29.87%), Postives = 238/519 (45.86%), Query Frame = 1
Query:   16 SRNVRLVFAYSFLAGMCRSLWSATVMSTYIYLLTGSEARVGYVTGIQGTAQALAAPLGALVSDKRGRVHALRVGGAAGLLSVAATAAXXXXXXXXXXXXXXXXXXXXXXGPFAVLCCAMAAWGVTWAVADPGVEALFADCVPCGQRSGVYTAKYVLTLLSSAAGPLVSIILFVLLGDVWTTRDCAAVILVGVCLAAVPNVVLFAFRAPPPPPLLSITSGVDRAADDDLSKPLLPAHAAEDVAHDAARDCEGGSNAGGAXXXXXAPPARRSTPGSKSAAFAGGANKGAAPLRC-GXXXXXXIA-VPAAVALSDVMSGLASGMSIRFFPIFFMSDVGLPPVAVSAIYAVSPLLTSAAATAAQRLLAPRLGRAATTV----VGISLLVLICGMRRGSGGSSAQSSAQVAALILVYLVRTALMNCSKPLTRSIIMDTPPYRDSLRAVTRRPYVVLTCACPTAAAAAAQVPPAQRARWSALESVSTAGWSGSAIVGGLLVERCGMLANFAATAALQATALAPLL 1554
            S+N+ L   ++F  G+   +W+  ++  Y++ L G     GY  GIQGTAQALA+   ++++D+  R   LR  G  G L +A T                          F +LC  MA +GV   +  P + A++AD +P GQRSG  T +YVL++ S A+GP+ +++LF++LG+ W  +    + ++G+ L  +    LF F            S  D   D+  S  LL     +D   +AA                              A         A  +R  G      +  +P  VA+SDV  GLASGM+I+FFPI+F   + L P+ V+ ++ + P++    +   Q++ + + GR    V    VGI+LL ++           +        LI +Y++R+AL+NC  PL RSI+MD                                 PP QRA+W ALES+S  GWSGSA++GG+LV+  G    F ATA +Q  A +PLL
Sbjct:    3 SKNIYLTNFFTFFDGLAMGMWNYAILGPYLFKLCGDNKHAGYAEGIQGTAQALASIPASILADRYRRDIVLRWSGGIGALGIALTIVALLQPYGHNWYEN-----------FLMLCVGMAVFGVYMGMWSPPLYAIYADSIPSGQRSGYETWRYVLSIGSLASGPVSNMVLFLILGNEWGIKQMTIIFMIGMALHFISIASLFFF------------SDDDTLGDE--SDALL-----DDSTQEAAE-----------------------------AEIIKARLLSAETIRAKGCFSWLHVTHIPYIVAISDVTFGLASGMTIKFFPIYFADVLQLSPILVNFVFVLDPVVEVLLSLTGQKI-SLQYGRVEVLVCFKIVGIALLWVMATF-------DSLWIEHPYWLISIYIIRSALINCVVPLARSILMD-------------------------------YCPPNQRAKWGALESLSAFGWSGSAVLGGILVDSYGFDIAFHATATVQLIAWSPLL 423          
BLAST of jgi.p|Trimin1|352746 vs. uniprot
Match: A0A7S2XXB9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXB9_9STRA)

HSP 1 Score: 166 bits (420), Expect = 6.780e-43
Identity = 99/252 (39.29%), Postives = 149/252 (59.13%), Query Frame = 1
Query:    4 WEGR--SRNVRLVFAYSFLAGMCRSLWSATVMSTYIYLLTG-SEARVGYVTGIQGTAQALAAPLGALVSDKRGRVHALRVGGAAGLLSVAATAAXXXXXXXXXXXXXXXXXXXXXXGPFAVLCCAMAAWGVTWAVADPGVEALFADCVPCGQRSGVYTAKYVLTLLSSAAGPLVSIILFVLLGDVWTTRDCAAVILVGVCLAAVPNVVLFAFRAPPPPPLLSITSGVD-----RAADDD----LSKPLLPAH 723
            ++GR  ++NVR+V +Y+FL  + RS+W A V+S Y+Y++TG S ++VGY+TG+ GTAQ LAAP  A ++D+  R   L+V GA G+    +TAA                      G +  LC  M  WG  +A ++P +EALFAD VP G+RS ++T KY+L   +++ GPL+++++F LLGD W  R+C  V+LVG+CL+ VP ++LF          L+  + +D     RA  D     L KPL+P H
Sbjct:    3 FQGRYTNKNVRIVLSYTFLNSVSRSIWGANVLSAYVYVITGGSNSQVGYLTGVLGTAQVLAAPFCAYLADRYRRDRMLKVAGAWGVCCSLSTAASLVL------------------GNYWALCLCMLGWGAFYAASNPALEALFADSVPLGKRSDIFTTKYMLLQAANSTGPLLAVVMFSLLGDYWDKRECTVVVLVGLCLSVVPALLLFT---------LNDRNALDQDQAGRAEQDPEGLLLRKPLIPRH 227          
BLAST of jgi.p|Trimin1|352746 vs. uniprot
Match: A0A8J9S9Q8_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S9Q8_9CHLO)

HSP 1 Score: 173 bits (439), Expect = 6.910e-43
Identity = 159/521 (30.52%), Postives = 226/521 (43.38%), Query Frame = 1
Query:   22 NVRLVFAYSFLAGMCRSLWSATVMSTYIYLLTGSEARVGYVTGIQGTAQALAAPLGALVSDKRGRVHALRVGGAAGLLSVAATAAXXXXXXXXXXXXXXXXXXXXXXGPFAVLCCAMAAWGVTWAVADPGVEALFADCVPCGQRSGVYTAKYVLTLLSSAAGPLVSIILFVLLGDVWTTRDCAAVILVGVCLAAVPNVVLFAFRAPPPPPLLSITSGVDRAADD--DLSKPLLPAHAAEDVAHDAARDCEGGSNAGGAXXXXXAPPARRSTPGSKSAAFAGGANKGAAPLRCGXXXXXXIAVPAAVALSDVMSGLASGMSIRFFPIFFMSDVGLPPVAVSAIYAVSPLLTSAAATAAQRLLAPRLGRAATTVV----GISLLVLICGMRRGSGGSSAQSSAQVAALILVYLVRTALMNCSKPLTRSIIMDTPPYRDSLRAVTRRPYVVLTCACPTAAAAAAQVPPAQRARWSALESVSTAGWSGSAIVGGLLVERCGMLANFAATAALQATALAPLLYVAC 1566
            NV+L   ++       SL S  + S +IYL T S + VGY+ GI G  Q L APL   ++DK  R   LRV    GL++    AA                      G       AMA  G      +P VE++FAD V  G +S +YT K+V+T LSSA GP+VS++LF +LG+ W   +C  V+L G+     P  ++  F               DR   D  + + PLL +    + A     + E   +                     S+AF                      VPA +  SD ++ LASGM+I+FF +FFM   GL PV VS + AVSP+  SA + AAQ   +   G    T+V     I LLV++  +   +G   A        L+  +L+R A  NC++PL RSI+M+  P R                                R + +AL+SV T  WSGS+  GG+L+ER G    F  TA ++  +  PLL + C
Sbjct:    4 NVKLALWWTLFENASASLRSGDIFSAFIYLYTDSNSTVGYIQGINGILQLLTAPLAGYLADKFRRDAVLRVAATIGLVAGLTLAASMYFQ-----------------GSVWHFFLAMALMGTYKGFNNPAVESIFADSVQTG-KSKLYTWKHVITSLSSAVGPIVSVVLFFILGNQWKVDECRFVLLFGLTFMVFPLSIMCFFND-------------DRTLGDISEAASPLLNSEQLPNKAESGNGELESQQSC-------------------CSSAFL---------------------VPALITFSDFIASLASGMTIKFFGLFFMQKCGLSPVTVSILSAVSPIFVSAGSIAAQSA-SSWCGEVPVTLVTRACDIGLLVIMAFLPTDAGPLKA-------VLLAAHLLRKACANCTRPLMRSILMEHVPKRH-------------------------------RGKVNALDSVRTFSWSGSSAAGGILIERFGFQTTFLVTACIKTVSFVPLLMLLC 414          
BLAST of jgi.p|Trimin1|352746 vs. uniprot
Match: A0A1E7F3F9_9STRA (MFS general substrate transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3F9_9STRA)

HSP 1 Score: 171 bits (434), Expect = 5.080e-42
Identity = 148/518 (28.57%), Postives = 234/518 (45.17%), Query Frame = 1
Query:   19 RNVRLVFAYSFLAGMCRSLWSATVMSTYIYLLT-GSEARVGYVTGIQGTAQALAAPLGALVSDKRGRVHALRVGGAAGLLSVAATAAXXXXXXXXXXXXXXXXXXXXXXGPFAVLCCAMAAWGVTWAVADPGVEALFADCVPCGQRSGVYTAKYVLTLLSSAAGPLVSIILFVLLGDVWTTRDCAAVILVGVCLAAVPNVVLFAFRAPPPPPLLSITSGVDRAADDDLSKPLLPAHAAEDVAHDAARDCEGGSNAGGAXXXXXAPPARRSTPGSKSAAFAGGANKGAAPLRCGXXXXXXIAVPAAVALSDVMSGLASGMSIRFFPIFFMSDVGLPPVAVSAIYAVSPLLTSAAATAAQRLLAPRLGRAATTV----VGISLLV-LICGMRRGSGGSSAQSSAQVAALILVYLVRTALMNCSKPLTRSIIMDTPPYRDSLRAVTRRPYVVLTCACPTAAAAAAQVPPAQRARWSALESVSTAGWSGSAIVGGLLVERCGMLANFAATAALQATALAPLL 1554
            RN+  V  Y++ A   R +W+   ++T ++LL  G    +G++T   G +Q   +    +++DK  R   L++G   G  +  AT                          + +L  A+  WG+ W + +  + ALF+D +P G+RS  +T + ++    +  GP +++I+F +LGD WT +DC+ V+L G  L+ +P ++L  F       L      ++    +D S  +  A   +D  ++  R  +                A    PG +                          VP  VA SD++SGLASGMSIR+F IF   ++GL PVAV  IY ++ +L       AQRL A   GR   TV    +GI L++ ++   + G   S          + +V ++RT+ MN  + LT+SI+MD                                VP  +R +W++LESV+   WSGSA +GG+LVER G+L NF  TA LQ  A  PLL
Sbjct:   50 RNITFVLLYTWFAFSGRGVWNQNCLATLVFLLRDGDPKSIGFITAAMGISQLCVSIPTGILADKYRRDILLKIGAFFGAAACGATIYAALHPG------------------YLLLVGALILWGIHWGIVNTAITALFSDSIPDGERSFYFTRRAIIINFGNMCGPAIALIMFAVLGDKWTVKDCSMVLLAGNVLS-LPGIILLCF-------LSDDLGEIENDGLEDNSNAIRTAVTHQDETYNEERLAK----------------ALCCLPGKRI-------------------------VPILVATSDIISGLASGMSIRYFAIFLYDNLGLSPVAVQIIYMMNSILQVGFRRQAQRL-AGTYGRCRVTVCMKWIGILLMISMVVSYKLGLPRS---------VVCIVLILRTSFMNSPQSLTKSILMDN-------------------------------VPKEERGKWASLESVNMFSWSGSAALGGILVERKGILFNFCFTAVLQLIATGPLL 459          
BLAST of jgi.p|Trimin1|352746 vs. uniprot
Match: A0A7S3F7Y8_9VIRI (Hypothetical protein n=2 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F7Y8_9VIRI)

HSP 1 Score: 170 bits (430), Expect = 3.030e-41
Identity = 178/522 (34.10%), Postives = 234/522 (44.83%), Query Frame = 1
Query:   46 SFLAGMCRSLWSATVMSTYIYLLTGSEARVGYVTGIQGTAQALAA-PLG-ALVSDKRGRVHALRVGGAAGLLSVAATA-AXXXXXXXXXXXXXXXXXXXXXXGPFAVLCCAMAAWGVTWAVADPGVEALFADCVPCGQRSGVYTAKYVLTLLSSAAGPLVSIILFVLLGDVWTTRDCAAVILVGVCLAAVPNVVLFAFRAPPPPPLLSITSGVDRAADDDLSKPLLPAHAAEDVAHDAARDCEGGSNAGGAXXXXXAPPARRSTPGSKSAAFAGGANKGAAPLRCGXXXXXXIAVPAAVALSDVMSGLASGMSIRFFPIFFMSDVGLPPVAVSAIYAVSPLLTSAAATAAQRLLAPRLGRAATT----VVGISLLVLICGMRRGSGGSSAQSSAQVAALILVYLVRTALMNCSKPLTRSIIMDTPPYRDSLRAVTRRPYVVLTCACPTAAAAAAQVPPAQRARWSALESVSTAGWSGSAIVGGLLVERCGMLANFAATAALQ---ATALAPLLYVACHEPRE 1581
            SF     RSL   + +S +I L TGS   VG  +G+ G    L A P+G AL      R   L+V GA G +S AA A                        G F  LC A+A WG+   V    VE  FAD V  G+RS +YT K  L    ++ GPLVS+ +F  LG  W TRD   V+LVG  L+ VP  +LFAFR        + T G +  A   ++ P   +  +            G S  GG      AP                 A K A  LR          VP  VA +DV S L SGM++++FPIFF  D+GL P+AV+AIY + PLL S A   AQRL + RLG A T     + GI+LLV I  +R+ +             LI +Y +RT LMN +  LT+ I+ D                                VP  +R  ++ALES++   WSGSA++GG+LV   G    F  TAA+Q   A  L PL  +   E R+
Sbjct:   12 SFAFSTVRSLMGNSQLSIFILLRTGSTVLVGLGSGVLGLVTFLCAIPVGIALDRGAVRRSRLLKVAGALGAVSSAAFALVLLCGHGLSRSADAQPAKPGDGIGIFLALCGALALWGIYTGVQSVAVETTFADSVRTGKRSLLYTYKSSLRTAGNSVGPLVSLPIFAALGGQWRTRDLTIVMLVGQALSLVPCAMLFAFRE-------AETLGEESEA---IAGPRKGSGVSSSN--------RGSSVRGGKAADAEAPXXXXX--------XTAAAAKRAHALRV---------VPWLVASADVCSMLGSGMTVKYFPIFFKDDLGLGPIAVNAIYVICPLLISMAGLIAQRL-SLRLGSAQTAFAFRLTGIALLVAISFIRQRN------------VLIPIYALRTGLMNSTSGLTKGILND-------------------------------HVPKHRRGFFNALESLNLFSWSGSAVLGGVLVSSIGYRHTFLCTAAVQTMSAMFLVPLFTLVERERRD 454          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352746 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CLY7_9STRA3.660e-46100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|352746 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCD3_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XQ92_HETAK1.930e-6334.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J5X9F2_DIALT6.020e-5233.68Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A8J6CDJ7_DIALT1.480e-5132.77Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
B7GAV3_PHATC1.870e-4932.41Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A0L0FXR6_9EUKA7.420e-4429.87Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A7S2XXB9_9STRA6.780e-4339.29Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A8J9S9Q8_9CHLO6.910e-4330.52Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A1E7F3F9_9STRA5.080e-4228.57MFS general substrate transporter n=1 Tax=Fragilar... [more]
A0A7S3F7Y8_9VIRI3.030e-4134.10Hypothetical protein n=2 Tax=Prasinoderma singular... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_130contigContig_130:443..1823 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352746|estExt_Genemark1.C_Ctg_1300001
Hectar predicted targeting categorysignal peptide
TranscriptId353068
TrackFilteredModels1
ProteinId352746
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352746gene_14357Tribonema minus UTEX_B_3156 geneContig_130 443..1823 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14357_2exon_14357_2Tribonema minus UTEX_B_3156 exonContig_130 443..650 -
exon_14357_1exon_14357_1Tribonema minus UTEX_B_3156 exonContig_130 1759..1823 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_14357UTR3_14357Tribonema minus UTEX_B_3156 three_prime_UTRContig_130 443..487 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14357CDS_14357Tribonema minus UTEX_B_3156 CDSContig_130 1759..1823 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352746Trimin1|352746|estExt_Genemark1.C_Ctg_1300001Tribonema minus UTEX_B_3156 polypeptideContig_130 488..1823 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14357 ID=mRNA_14357|Name=jgi.p|Trimin1|352746|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=273bp|location=Sequence derived from alignment at Contig_130:443..1823- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACGGCGAGGACGACGGCCGCGGCGGCAGCCCTTGCGGCGCAGATGCT
GCCGCTGGCAGGCCCGGGACCCACATGGTCTGCGGAGGAGGACGACATCC
TGCAGAACGTCGGCGCAGAGAAGTGGTCCGTCGTAGCGGCGTCCGCACCA
AGGCAACGACCAGGCCTGCCGCGCAGCTGGGTCAAAAAATGCCTGGACTC
CACGCTGGAGCGGAAGTGGACTTCCTGAGGAAAGAGTGTGAGCTCCGCTC
AGCAGCGGCTCAGCAACAAGTGG
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protein sequence of jgi.p|Trimin1|352746

>Trimin1|352746|estExt_Genemark1.C_Ctg_1300001 ID=Trimin1|352746|estExt_Genemark1.C_Ctg_1300001|Name=jgi.p|Trimin1|352746|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=76bp
MTARTTAAAAALAAQMLPLAGPGPTWSAEEDDILQNVGAEKWSVVAASAP
RQRPGLPRSWVKKCLDSTLERKWTS*
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mRNA from alignment at Contig_130:443..1823-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14357 ID=mRNA_14357|Name=jgi.p|Trimin1|352746|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1381bp|location=Sequence derived from alignment at Contig_130:443..1823- (Tribonema minus UTEX_B_3156 )
ATGACGGCGAGGACGACGGCCGCGGCGGCAGCCCTTGCGGCGCAGATGCT GCCGCTGGCAGGCCCGTGATGCCGCAGCGGTTCGGCCTCGTTTTGGAGCC CAATAGTTTGAGCCATGGCACTGTGGATGCCGGCGGCGGTTTCTTCTGAC CGATAACTGTGACGTACGCTAGCGTGGGCGCATTGCGCCGGTGCGCGGCA GTGCTTCGTTTGTTGAAGTTGGGCTGCAGTCAATGCCCCCCAAACGGCAT GCAGACAGGCAGGACAGCCCTATTTATGATTGAGTGCCTTCTGACACAGC CACATCATGGTGCGCTGACGAGGATGCACTGTGGCAGGTTCATGTTGCGT GCCGATGGGTTGATGTTGTGATGCGGACCATATTCATACGCGCTGCGCAA AGGCATTGGAGATGCGTTTCGCTTTGATTGCTGCAGTTTTAGAGACAGCG CAGCAGCTACCTGTCTGTGCAGAAAGAACAGAGCTTCAAATAGATCATCC AGCGCACTGGTCTTGTAGACGTGGCCACCGTCGATGCAACCAACTAGCAA ATTTCCAGCAAACCCACATCGCATATATTTAAAGATACCCCCACCTCATT ACTCTGTACACGCTGCTTGATTTTTGTTTTTCTTTCTGCGATCGCAGCGT GCTCACAGTTGCATGCGCTCCATGCCATGCCACTCAGGGCAGGGCAGGCT GAGCTGTTGCAAAGCGTCACAGCACACACGGGGGATGGCGTGTGCATGCT GCATTGCAGTCCAGATCTGGTTCTGCAACGTCTGCTCGTCCCTGGACGGT TGGGCGTGCCTCGTTTCTGATGCTTCAACTGACATGTACGGGCAAAGCTC GGACGCTGCCTGAATGTGCACGCTGTAGCGCTGTCAACTCAGGCAAACGC ACACACACACACACGCTGCATGCCTGGCGCGTTTGTGGGACGGTGGTGTT CTTGTTGAAGTTCAGTTCCCTGCTTCAACTTCAACAAGCAAAAAAAATGT GGCACGTCCAACCAAGCTGGTACCACTCAACTTTGCGTTCTTCGTTGCGT TCTCGAAAACAGAGAGGATTTAGACATGCCATCTGCCGCGACGTGATGGG GAGTTTGGGGGCTGCGAGGTGCAAGCGCGCATGAATTGTTGCTGATCTCT CTGCCGGTGGTGCATTTTGGCAGGGGACCCACATGGTCTGCGGAGGAGGA CGACATCCTGCAGAACGTCGGCGCAGAGAAGTGGTCCGTCGTAGCGGCGT CCGCACCAAGGCAACGACCAGGCCTGCCGCGCAGCTGGGTCAAAAAATGC CTGGACTCCACGCTGGAGCGGAAGTGGACTTCCTGAGGAAAGAGTGTGAG CTCCGCTCAGCAGCGGCTCAGCAACAAGTGG
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Coding sequence (CDS) from alignment at Contig_130:443..1823-

>mRNA_14357 ID=mRNA_14357|Name=jgi.p|Trimin1|352746|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=228bp|location=Sequence derived from alignment at Contig_130:443..1823- (Tribonema minus UTEX_B_3156 )
ATGACGGCGAGGACGACGGCCGCGGCGGCAGCCCTTGCGGCGCAGATGCT
GCCGCTGGCAGGCCCGGGACCCACATGGTCTGCGGAGGAGGACGACATCC
TGCAGAACGTCGGCGCAGAGAAGTGGTCCGTCGTAGCGGCGTCCGCACCA
AGGCAACGACCAGGCCTGCCGCGCAGCTGGGTCAAAAAATGCCTGGACTC
CACGCTGGAGCGGAAGTGGACTTCCTGA
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