Trimin1|347591|estExt_Genemark1.C_Ctg_130137 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347591
Unique NameTrimin1|347591|estExt_Genemark1.C_Ctg_130137
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length200
Homology
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BLAST of jgi.p|Trimin1|347591 vs. uniprot
Match: A0A835ZDP0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP0_9STRA)

HSP 1 Score: 353 bits (907), Expect = 1.150e-122
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 
Query:    1 MPVDEGALTSRQEEALELYGSAHKARLALLGEKHPDTVAVRNNIAELLERMGRADESLAMRERILQSLGVSQKDLAEMENVDEKAFNEQKMKTDEKWDEIQAEMIAEQRKQRQKVIKPDPTKLFSTKPKQTSRNAPALDTRIAQTPLNASGSPVVDADEFVAISFSAEESSCXXXXXXXXXXWEAYADEICRKPPPPTG 199
            MPVDEGALTSRQEEALELYGSAHKARLALLGEKHPDTVAVRNNIAELLERMGRADESLAMRERILQSLGVSQKDLAEMENVDEKAFNEQKMKTDEKWDEIQAEMIAEQRKQRQKVIKPDPTKLFSTKPKQTSRNAPALDTRIAQTPLNASGSPVVDADEFVAISFSAEESSCXXXXXXXXXXWEAYADEICRKPPPPTG
Sbjct:    1 MPVDEGALTSRQEEALELYGSAHKARLALLGEKHPDTVAVRNNIAELLERMGRADESLAMRERILQSLGVSQKDLAEMENVDEKAFNEQKMKTDEKWDEIQAEMIAEQRKQRQKVIKPDPTKLFSTKPKQTSRNAPALDTRIAQTPLNASGSPVVDADEFVAISFSAEESSCXXXXXXXXXXWEAYADEICRKPPPPTG 199
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347591 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZDP0_9STRA1.150e-122100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 7..161
e-value: 5.7E-13
score: 50.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 11..66
NoneNo IPR availablePFAMPF13424TPR_12coord: 13..65
e-value: 7.0E-8
score: 32.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_13contigContig_13:1387783..1392615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347591mRNA_5867Tribonema minus UTEX_B_3156 mRNAContig_13 1387783..1392662 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347591|estExt_Genemark1.C_Ctg_130137 ID=Trimin1|347591|estExt_Genemark1.C_Ctg_130137|Name=jgi.p|Trimin1|347591|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=200bp
MPVDEGALTSRQEEALELYGSAHKARLALLGEKHPDTVAVRNNIAELLER
MGRADESLAMRERILQSLGVSQKDLAEMENVDEKAFNEQKMKTDEKWDEI
QAEMIAEQRKQRQKVIKPDPTKLFSTKPKQTSRNAPALDTRIAQTPLNAS
GSPVVDADEFVAISFSAEESSCSGGQEDDDDDWEAYADEICRKPPPPTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf