mRNA_15288 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352674 vs. uniprot
Match: A0A835ZB59_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB59_9STRA) HSP 1 Score: 1400 bits (3623), Expect = 0.000e+0 Identity = 705/705 (100.00%), Postives = 705/705 (100.00%), Query Frame = 1
Query: 1 MDVDGRRCWVRGSITSFEAVDSHRLIMLTLQRDRVRTNNTIQDDVGVDGPLKLSINSYREETRGVTVFGTRAPGVDSWFLIQRKRASKKGSKGRQYVRAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPHLHSNGKRTHGITVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGADRPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQAHSQTHEHKVKQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMANFDGLIELLAHRRPADGFNMAQTEGDCAHLEVDWVTTLAHHMLGAEQFTTYDVANLEVLVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRTMRAIHFGTPVPDRLVGLSGGANYQVSQHTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKAMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFKASLTSRVQNRGKRSQFTEDAPPAKTPS 2115
MDVDGRRCWVRGSITSFEAVDSHRLIMLTLQRDRVRTNNTIQDDVGVDGPLKLSINSYREETRGVTVFGTRAPGVDSWFLIQRKRASKKGSKGRQYVRAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPHLHSNGKRTHGITVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGADRPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQAHSQTHEHKVKQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMANFDGLIELLAHRRPADGFNMAQTEGDCAHLEVDWVTTLAHHMLGAEQFTTYDVANLEVLVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRTMRAIHFGTPVPDRLVGLSGGANYQVSQHTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKAMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFKASLTSRVQNRGKRSQFTEDAPPAKTPS
Sbjct: 1 MDVDGRRCWVRGSITSFEAVDSHRLIMLTLQRDRVRTNNTIQDDVGVDGPLKLSINSYREETRGVTVFGTRAPGVDSWFLIQRKRASKKGSKGRQYVRAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPHLHSNGKRTHGITVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGADRPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQAHSQTHEHKVKQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMANFDGLIELLAHRRPADGFNMAQTEGDCAHLEVDWVTTLAHHMLGAEQFTTYDVANLEVLVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRTMRAIHFGTPVPDRLVGLSGGANYQVSQHTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKAMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFKASLTSRVQNRGKRSQFTEDAPPAKTPS 705
BLAST of jgi.p|Trimin1|352674 vs. uniprot
Match: A0A836CI03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI03_9STRA) HSP 1 Score: 1229 bits (3181), Expect = 0.000e+0 Identity = 644/749 (85.98%), Postives = 655/749 (87.45%), Query Frame = 1
Query: 52 EAVDSHRLIMLTLQRDRVRTNNTIQDDVGVDGPLKLSINSYREETRGVTVFGTRAPGVDSWFLIQ------------------------RKRASKKGSKG-RQYVRAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPHLHSNGKRTHGI-----------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGADRPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQAHSQTHEHKVKQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMANFDGLIELLAHRRPADGFNMAQTEGDCAHLEVDWVTTLAHHMLGAEQFTTYDVANLEVLVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRTMRAIHFGTPVPDRLVGLSGGANYQVSQHTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKAMKM----PYGEQQDFIASSMKELHSSVSAGKSAYRQFKASLTSRVQNRGKRSQFTE 2088
EAVDSHRLIMLTLQRDRVR NNTIQDDVGVDGPLKLSINSYREET GVTVFGTRAPGVDSWFLIQ RKRASKKGSKG RQYVR PTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKR SGSR+DANEWVR GKYLRPNQPHLHSNGKRTHGI T+DTLELE PRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRG +RPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCL TIRSTLQN IDLSRCTESLRRNQAPFQCYIRLQLKKWQA+SQTHEHKV+QGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMA+FDGLIELLAHRRPADGFNMAQTEGDCAHLEV WVTTLAHH+L AEQFTTYDVANLE+LVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCR MRAIHFGTPVPDRLVGLSGGANYQV Q TFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKA KM +GE QDFI SSMKELHSSV+A KSAYRQF+A SRVQNRGKRSQF E
Sbjct: 395 EAVDSHRLIMLTLQRDRVRINNTIQDDVGVDGPLKLSINSYREETPGVTVFGTRAPGVDSWFLIQSEPIPATAPTADSERNGDGMAANVRKRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRKSGSRVDANEWVRKGKYLRPNQPHLHSNGKRTHGIVRAIADAVTCDRLLPPKQHRYTHLDTSSSYMAICWPGLTRQTMDTLELEKFPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLHTIRSTLQNLIDLSRCTESLRRNQAPFQCYIRLQLKKWQAYSQTHEHKVEQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMADFDGLIELLAHRRPADGFNMAQTEGDCAHLEVGWVTTLAHHVLEAEQFTTYDVANLEILVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRAMRAIHFGTPVPDRLVGLSGGANYQVRQGTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKARKMCAEGRWGEAQDFILSSMKELHSSVAAAKSAYRQFEALRASRVQNRGKRSQFVE 1143
BLAST of jgi.p|Trimin1|352674 vs. uniprot
Match: A0A836CJR7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJR7_9STRA) HSP 1 Score: 1155 bits (2987), Expect = 0.000e+0 Identity = 611/772 (79.15%), Postives = 629/772 (81.48%), Query Frame = 1
Query: 4 DVDGRRCWVRGSITSFEAVDSHRLIMLTLQRDRVRTNNTIQDDVGVDGPLKLSINSYREETR---GVTVFGTRAPGVDSWFLIQRK--------------------RASKKGSKGRQYV------------RAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPHLHSNGKRTHGI-----------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGADRPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQAHSQTHEHKVKQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMANFDGLIELLAHRRPADGFNMAQTEGDCAHLEVDWVTTLAHHMLGAEQFTTYDVANLEVLVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRTMRAIHFGTPVPDRLVGLSGGANYQVSQHTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKAMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFKASLTSRVQNRGKRSQFTED 2091
DVDGRRCWVRGSITSFEAVDSHRLI LTLQRDRVR NNT QD VGVDGPL+LSINSYREET GVTVFG +APGVDSWFL Q + K G RQ + RAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSR DANEWVR+GKYLRPNQPHLHSNGKRTHGI TVDTLELE LP+KT AN TPVNSVIKILSTAAVLGRLPTCASGAVML QEELELAETRIHATTVADDRKPFGVLETL+PPSHPSLPRALEALVCSKRGA+RPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCL TIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQA+SQTHEHKV+QGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMA+FDGLIE LA+RRPADGFNMAQTEGDCAHLEV WVTTLAHHML AEQFT YDVANLE+LVHLYAYYLLPVRPEALMSNLASQ+WAKMTTGPDGRVSFILFQDIANA+LGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCR MRAIHFGTPVPDRLVGLSGGANYQVSQ+TFREKV NEIGRSNLGIPYYASYSNRSTAVTEIFAKA KM + + RGKRSQFTED
Sbjct: 425 DVDGRRCWVRGSITSFEAVDSHRLIKLTLQRDRVRINNTNQDGVGVDGPLRLSINSYREETSKIPGVTVFGNKAPGVDSWFLAQSEPIPATAPTADSERNGDGMAANVRKYGCLSRQILTSLLKMLRCYPRRAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGIVCAIADAATCDRLVPPKQHRYTHLDTSSSYMAICWPGLTQQTVDTLELEKLPKKTVANRTPVNSVIKILSTAAVLGRLPTCASGAVMLNQEELELAETRIHATTVADDRKPFGVLETLIPPSHPSLPRALEALVCSKRGAERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLHTIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQAYSQTHEHKVEQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMADFDGLIERLANRRPADGFNMAQTEGDCAHLEVGWVTTLAHHMLEAEQFTMYDVANLEILVHLYAYYLLPVRPEALMSNLASQIWAKMTTGPDGRVSFILFQDIANAKLGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQNTFREKVPNEIGRSNLGIPYYASYSNRSTAVTEIFAKARKM----------------------------------CAEGRTRGKRSQFTED 1162
BLAST of jgi.p|Trimin1|352674 vs. uniprot
Match: A0A836CI45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI45_9STRA) HSP 1 Score: 1129 bits (2921), Expect = 0.000e+0 Identity = 574/647 (88.72%), Postives = 587/647 (90.73%), Query Frame = 1
Query: 4 DVDGRRCWVRGSITSFEAVDSHRLIMLTLQRDRVRTNNTIQDDVGVDGPLKLSINSYREETRGVTVFGTRAPGVDSWFLIQRKRASKKGSKGRQ-YVRAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPHLHSNGKRTHGITVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGADRPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQAHSQTHEHKVKQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMANFDGLIELLAHRRPADGFNMAQTEGDCAHLEVDWVTTLAHHMLGAEQFTTYDVANLEVLVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRTMRAIHFGTPVPDRLVGLSGGANYQVSQHTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKAMKM 1941
DVDGRRCWVRG+ITSFEAVDSHRLI LTLQRDRVR NNT QDDVGVDGPL+LSINSYREE G++VFG RAPGVDSWFL Q KRASKKGSKG+Q Y R PTRTELLSLSDVLK AEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQP LHSNGKRTHGITVDTLELE LPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTV DDRKPF VLETLVPPSHPSLPRALEALVCS+RG +RPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCL TIRSTLQNSIDLS CTESLRRNQAPFQCY RLQL+KWQAHSQTHEHKV+QGR+LPEHLMYLIHDMLEGFIKSTWKPFE AIQRGLEAQGRQMA+FDGLIELLAH RPADGFNMAQTEGDCAHLEVDWV TLAHHML AEQFTTYDVANLE+LVHLYAYYLLP D+ANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCR MRAIHFGTPVPDRLVGLSGGANYQV Q TFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKA KM
Sbjct: 380 DVDGRRCWVRGAITSFEAVDSHRLIKLTLQRDRVRINNTNQDDVGVDGPLELSINSYREEPSGISVFGNRAPGVDSWFLAQSKRASKKGSKGKQQYARTPTRTELLSLSDVLKCAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPRLHSNGKRTHGITVDTLELEALPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVPDDRKPFDVLETLVPPSHPSLPRALEALVCSQRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLHTIRSTLQNSIDLSECTESLRRNQAPFQCYFRLQLRKWQAHSQTHEHKVEQGRILPEHLMYLIHDMLEGFIKSTWKPFESAIQRGLEAQGRQMADFDGLIELLAHHRPADGFNMAQTEGDCAHLEVDWVATLAHHMLEAEQFTTYDVANLEILVHLYAYYLLP--------------------------------DVANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRAMRAIHFGTPVPDRLVGLSGGANYQVRQGTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKARKM 994
BLAST of jgi.p|Trimin1|352674 vs. uniprot
Match: A0A835YUX3_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUX3_9STRA) HSP 1 Score: 1125 bits (2910), Expect = 0.000e+0 Identity = 598/778 (76.86%), Postives = 617/778 (79.31%), Query Frame = 1
Query: 4 DVDGRRCWVRGSITSFEAVDSHRLIMLTLQRDRVRTNNTIQDDVGVDGPLKLSINSYREETRGVTVFGTRAPGVDSWFLIQR-----------------------KRASKKGSKG-RQYVRAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPHLHSNGKRTHGI-----------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGADRPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQAHSQTHEHKVKQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMANFDGLIELLAHRRPADGFNMAQTEGDCAHLEVDWVTTLAHHMLGAEQFTTYDVANLEVLVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRTMRAIHFGTPVPDRLVGLSGGANYQVSQHTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKAMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFKASLTSRVQNRGKRSQFTEDAPPAKTPS*HGCTKCLR 2142
D DGRRCWVRG+ITSFEAVDSHRL+ LTLQRDRVR NNT QDDVGVDGP++LSINSYREE G++VFG RAP VDSWFL Q KRASKKGSKG RQYVR PTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSR DANEWVR+GKYLRPNQPHLHSNGKRTHGI TVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGR PTCAS ALVCSKRG +RPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLM DAQFCL T+RSTLQNSIDLS C ESLRRNQAPFQCYIRLQ +KWQA SQ HEHKVKQGR+LPEHLMYLIHDMLEGFI+STWKPFERAIQRGLE QGRQM +FDGLIELLAHRRPADGFNMAQ EGDC HLEVDWVTTLAHHML AEQFTTYDVANLE+LVHLYAYYLLPVRPEAL+SNLASQVWAK T GPDG VSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVP ELNRPMLT+LFLCR MRAIHFGTPVPDRLVGLSGGANYQVSQ TFREKVLNEIGR+NLGIPYYASYSNRSTAVTEIFAK MKMPYGEQQDFIASSMKELHSSVSAGKSAYRQF+ASL+SRVQNRGKRSQF A HG LR
Sbjct: 1 DADGRRCWVRGAITSFEAVDSHRLVKLTLQRDRVRINNTNQDDVGVDGPIELSINSYREEPSGISVFGNRAPVVDSWFLAQSPEPTTAPTGNSERIGDGMAVNASKRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGIVRAIADTVTCDRLLPPKQHRYTHLDTSSSYMAICWPGLTQQTVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRRPTCAS------------------------------------------------ALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQNSIDLSGCIESLRRNQAPFQCYIRLQHRKWQALSQAHEHKVKQGRILPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLAHRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILVHLYAYYLLPVRPEALVSNLASQVWAKRTMGPDGCVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIPYYASYSNRSTAVTEIFAKTMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFEASLSSRVQNRGKRSQFV-----AADGEGHGLVDVLR 725
BLAST of jgi.p|Trimin1|352674 vs. uniprot
Match: A0A836CHY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY4_9STRA) HSP 1 Score: 1092 bits (2823), Expect = 0.000e+0 Identity = 576/727 (79.23%), Postives = 596/727 (81.98%), Query Frame = 1
Query: 4 DVDGRRCWVRGSITSFEAVDSHRLIMLTLQRDRVRTNNTIQDDVGVDGPLKLSINSYREETRG---VTVFGTRAPGVDSWFLIQRKRASKKGSKGRQ-YVRAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPHLHSNGKRTHGI-----------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGADRPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQAHSQTHEHK------------------------VKQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMANFDGLIELLAHRRPADGFNMAQTEGDCAHLEVDWVTTLAHHMLGAEQFTTYDVANLEVLVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRTMRAIHFGTPVPDRLVGLSGGANYQVSQHTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKAMKMPYGEQQDFIASS 1977
DVDGRRCWVRG+ITSFEAVDSHRLI LTLQRDR+R NNT QD VGVDGPL+LSINSYREET G VTVFG RAPGVDSWFL QRKRASKKGSKG+Q YVR PTRTELLSLSDVLKRAEPAQGI PLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKR SGSR+DANEWVR GKYLRPNQPHLHSNGKRTHGI TVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRG +R PVCVVNSTPMARMEMWFLSADTNSGE ARSQSAYCNLMSDAQFCL TIRSTLQNS+DLS CTESLR+NQAPFQ Y RLQLKKWQA SQ HEH VKQGRMLPE+LMY IHDMLEGFI+STWKPF+RAIQRGLE QGR+MA+FDGLI+LLAHRRPADGFNMAQTEGDCAHLEVDWVT LAHHML AEQFTTYDVANLE+LVHLYAYYLLP DIANAELGK+AMSGG DD+EPMKT VPVPSELNRPMLTVLFLCR MRAIHFGTPVPDRLVGLSGGANYQVSQ TFREKVLNEIGR NLGIPYYASYSNRSTAVTEIFAKAM+MP+GE+QDFIASS
Sbjct: 545 DVDGRRCWVRGAITSFEAVDSHRLIKLTLQRDRLRINNTNQDAVGVDGPLELSINSYREETSGISGVTVFGNRAPGVDSWFLAQRKRASKKGSKGKQQYVRTPTRTELLSLSDVLKRAEPAQGITPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRKSGSRVDANEWVRKGKYLRPNQPHLHSNGKRTHGIVRAIANAVTCDRLLPRKQHRYTHLDTSSSYMAFCWPGLSQQTVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGGERAPVCVVNSTPMARMEMWFLSADTNSGEGARSQSAYCNLMSDAQFCLHTIRSTLQNSLDLSGCTESLRQNQAPFQRYTRLQLKKWQARSQAHEHXXXXXXXXXXXXXXXXXXXXXXXXXVKQGRMLPENLMYRIHDMLEGFIRSTWKPFDRAIQRGLETQGRRMADFDGLIQLLAHRRPADGFNMAQTEGDCAHLEVDWVTALAHHMLEAEQFTTYDVANLEILVHLYAYYLLP--------------------------------DIANAELGKVAMSGGDDDSEPMKTYVPVPSELNRPMLTVLFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRCNLGIPYYASYSNRSTAVTEIFAKAMQMPFGEKQDFIASS 1239
BLAST of jgi.p|Trimin1|352674 vs. uniprot
Match: A0A835ZAC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC7_9STRA) HSP 1 Score: 1068 bits (2761), Expect = 0.000e+0 Identity = 569/830 (68.55%), Postives = 626/830 (75.42%), Query Frame = 1
Query: 4 DVDGRRCWVRGSITSFEAVDSHRLIMLTLQRDRVRTNNTIQDDVGVDGPLKLSINSYREETR---GVTVFGTRAPGVDSWFLIQ------------------------------------------------------------RKRASKKGSKGRQ-YVRAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPHLHSNGKRTHGI-----------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQ--EELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGADRPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQNSIDLSRCTESLRRNQ--APFQCYIRLQLKKWQAHSQTHEHKVKQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMANFDGLIELLAHRRPADGFNMAQTEGDCAHLEVDWVTTLAHHMLGAEQFTTYDVANLEVLVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRTMRAIHFGTPVPDRLVGLSGGANYQVSQHTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKAMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFKASLTSRVQNRGKRSQFTEDAPPAKTPS*HGCTKCLRLRMLCNSN 2166
+V +CWVRG ITS EAV SHRLI +TLQRDR+R NNTI+D VGVDGP++L INSYREET GVTVFG RAP + +WFL Q RK K+G KG+ +VR PTRTELLSLSDVLKRAEP QG+MPLCEAWGT+LLQRACLVFEGMLV+HVYLTD+KVK+ SGSR+DANEWVR GKYLRPNQPHLHS+GKRTHGI T+ TLELE P KTA+N+ PVNSVIKILSTAAVLGRLPTCASGAVMLTQ +ELELA +RIHATTVADDR+PFG+LETLV PSHP LP ALEALVCS+ G +R P CVVNSTPMARMEMWFLSADTNSGEAARS +AY NLMS+AQFC TIRS L+NSIDLS CTE LR++Q APFQCYIRLQLKKWQA SQTHEHKV QGRMLPEHLMYLIHDMLEGFI+ TWKPFERAIQRGL QGRQMA+FDGL+ +LA RR ADGFNMAQT+G CAHLEVDWV TLAHHML EQFTTYDVANLE+LVHLYAYYLLPVRPE+LM NLASQVWA+MTTGPDGRV F +FQ+IANAELG +A +GG DD+EPMKTCVPVP ELNRPMLTVLFLCR MR IHFG+PVPDRLVGLSGG+N+QV +TFR+KVLNEIGR NLGIPYYASYSNRSTAVTEI+A A KMP+GE QDFIASSMKELHSSV+AG+SAYRQF LTS+VQNRGKR F E A H LR R L S+
Sbjct: 412 EVGANKCWVRGRITSCEAVGSHRLISVTLQRDRLRINNTIEDAVGVDGPIELDINSYREETSKVAGVTVFGNRAPAIGAWFLAQSVDPIMPAKDMTSTVTAPSTDSERNDNGMASNVSSTAAQESQPNETSDDLRSTSVDAAPNRKSTGKRGGKGKAPHVRTPTRTELLSLSDVLKRAEPEQGVMPLCEAWGTFLLQRACLVFEGMLVLHVYLTDSKVKKKSGSRLDANEWVRKGKYLRPNQPHLHSDGKRTHGIVRAIADSVTCDRLLPPTQHRYSHLNTSSSYLSLCWPGLTQQTISTLELEGNPGKTASNIPPVNSVIKILSTAAVLGRLPTCASGAVMLTQPEDELELAASRIHATTVADDRQPFGILETLVSPSHPLLPPALEALVCSEAGRERAPACVVNSTPMARMEMWFLSADTNSGEAARSPAAYNNLMSEAQFCRHTIRSILKNSIDLSACTERLRQDQMIAPFQCYIRLQLKKWQATSQTHEHKVDQGRMLPEHLMYLIHDMLEGFIERTWKPFERAIQRGLVLQGRQMADFDGLVNILAQRRRADGFNMAQTDGGCAHLEVDWVKTLAHHMLEQEQFTTYDVANLEILVHLYAYYLLPVRPESLMCNLASQVWARMTTGPDGRVFFSIFQEIANAELGTVANTGGCDDSEPMKTCVPVPEELNRPMLTVLFLCRAMRTIHFGSPVPDRLVGLSGGSNHQVGDNTFRDKVLNEIGRCNLGIPYYASYSNRSTAVTEIYAAASKMPFGEAQDFIASSMKELHSSVAAGQSAYRQFLLLLTSKVQNRGKRHNFVEATGEANADVPHP-PPALRPRFLAGSD 1240
BLAST of jgi.p|Trimin1|352674 vs. uniprot
Match: A0A835Z3D5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3D5_9STRA) HSP 1 Score: 989 bits (2556), Expect = 0.000e+0 Identity = 529/800 (66.12%), Postives = 595/800 (74.38%), Query Frame = 1
Query: 1 MDVDGRRCWVRGSITSFEAVDSHRLIMLTLQRDRVR-TNNTIQDDVGVDGPLKLSINSYREETR---GVTVFGTRAPGVDSWFLIQR---------------------------------------------------KRASKKGSKG---RQYVRAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPHLHSNGKRTHGI-------------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGADRPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQN---SIDLSRCTESLRRNQAPFQCYIRLQLKKWQAHSQTHEHKVKQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMANFDGLIELLAHRRPADGFNMAQTEGDCAHLEVDWVTTLAHHMLGAEQFTTYDVANLEVLVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRTMRAIHFGTPVPDRLVGLSGGANYQVSQHTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKAMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFKASLTSRVQNRGKRSQFTE 2088
M+VD + WVRG ITS E VDSHR++ + LQRDR+R NNTI+D VGVDGP+KL I SYREET G +VFG RAP + +WFLIQ K SK+ +G R VR PTRTELLSLSDVLKRAEP QG+ PLC+AWGT+LLQRACLVFEGMLV+HVYLTD+KVKR S SR+D NEW R GKYLR NQ HLHS+GKRTHGI T+ TLELE P KT A PVNS+IKILSTAAVLGRLPTCASGAVMLTQ+EL+LA +RIHATTVADDR+PFGVLETLVPPSHPSLP ALEALVCS+ G R P CVVNSTPMARM+MWFLSADTNSGEAARS SAY NLMS+AQFC TIRS ++N SIDL++CT+ LR +Q CYIR+QLKKWQA SQTHEH V QGRMLPEHLMYLIHDML G I+ TWKPFERAIQ GLE GRQMA+ DGL+ +LA RR DGFNMAQT+GDCAHLEVDWVTTLAHHML EQFTTYDVANLE+LVHL+AYYLLPVRPE+LM NL SQVWA+ TTG DGRV+ F+ + ELGKIAM+GGG+D+EPMKTCVPVP ELNRPMLTVLFLCR MR IHFG+P PDRLVGLSGG+N+QV+++TFR+KVLNEIGR NLGIPYYASYSNR TAVTEIFA A +P+GEQQDFIASSMKELHSS++AG++AYRQF SL S+VQNRGKR +F E
Sbjct: 555 MEVDHIKRWVRGWITSCEVVDSHRIVSVKLQRDRLRINNNTIEDVVGVDGPIKLDITSYREETSQVPGASVFGPRAPAIGTWFLIQSTTGPTVAAPNSGSERNDDGMAANVSSTAAQSQPNETPDDLRSTIVDAAPGTKSTSKRAGQGKGKRPAVRTPTRTELLSLSDVLKRAEPEQGVTPLCKAWGTFLLQRACLVFEGMLVLHVYLTDSKVKRKSTSRLDPNEWTRKGKYLRDNQRHLHSDGKRTHGIVRAIADSITCDHLLPPTQHRYTHLNTSGKGSYLSMCWPGVTQQTISTLELEIHPEKTVATG-PVNSIIKILSTAAVLGRLPTCASGAVMLTQDELKLALSRIHATTVADDRQPFGVLETLVPPSHPSLPPALEALVCSEAGGVRAPACVVNSTPMARMDMWFLSADTNSGEAARSPSAYNNLMSEAQFCRHTIRSIMKNAIDSIDLTKCTDRLREDQ----CYIRVQLKKWQATSQTHEHNVDQGRMLPEHLMYLIHDMLAGLIERTWKPFERAIQLGLELHGRQMADLDGLVNILARRRRVDGFNMAQTDGDCAHLEVDWVTTLAHHMLEEEQFTTYDVANLEILVHLHAYYLLPVRPESLMGNLVSQVWARRTTGADGRVASTCFRRLPTRELGKIAMTGGGEDSEPMKTCVPVPEELNRPMLTVLFLCRAMRTIHFGSPPPDRLVGLSGGSNHQVAENTFRDKVLNEIGRCNLGIPYYASYSNRCTAVTEIFAVASTLPWGEQQDFIASSMKELHSSIAAGQTAYRQFLLSLDSKVQNRGKRHRFVE 1349
BLAST of jgi.p|Trimin1|352674 vs. uniprot
Match: A0A835Z1J2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1J2_9STRA) HSP 1 Score: 514 bits (1323), Expect = 2.710e-175 Identity = 262/360 (72.78%), Postives = 289/360 (80.28%), Query Frame = 1
Query: 910 MARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQAHSQTHEHKVKQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMANFDGLIELLAHRRPADGFNMAQTEGDCAHLEVDWVTTLAHHMLGAEQFTTYDVANLEVLVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRTMRAIHFGTPVPDRLVGLSGGANYQVSQHTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKAMKM----PYGEQQDFIASS 1977
MAR+EMW +SAD NSGEA+R+ S+Y NL Q CL TIRSTL+NSIDLS CTESLR+NQAPFQC+IRLQL+KWQAHSQT EHKV QGRMLPEHLMYLIHDMLEGFI+ TWKPFERAIQRGLE QGRQMA+FD L++ L HRR ADGF+MAQ +GDCAHL+VDWVT LAHHML EQFTTYDVANLE+LV WAKM G DGRVS+ FQDIANAELGKIAMSGGGDD EPMKTCVPVP+ELNRPMLTVLFLCR MR I FG+ PDRLVGLSGG N+QV ++TFR KVLNEIGR NLGIP+YA+YSNRSTAVTEI+ A KM +GE QDFI SS
Sbjct: 1 MARVEMWLISADINSGEASRAPSSYNNL---TQICLHTIRSTLKNSIDLSACTESLRQNQAPFQCFIRLQLRKWQAHSQTPEHKVNQGRMLPEHLMYLIHDMLEGFIQITWKPFERAIQRGLELQGRQMADFDALVKSLTHRRAADGFDMAQRDGDCAHLQVDWVTKLAHHMLEVEQFTTYDVANLEILV-----------------------WAKMMVGQDGRVSYSRFQDIANAELGKIAMSGGGDDGEPMKTCVPVPAELNRPMLTVLFLCRAMRTIRFGSAAPDRLVGLSGGCNHQVKENTFRNKVLNEIGRCNLGIPFYAAYSNRSTAVTEIYEAARKMCAEGRWGEAQDFIISS 334
BLAST of jgi.p|Trimin1|352674 vs. uniprot
Match: A0A835YVB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB5_9STRA) HSP 1 Score: 431 bits (1107), Expect = 4.640e-136 Identity = 238/380 (62.63%), Postives = 267/380 (70.26%), Query Frame = 1
Query: 100 RVRTNNTIQDDVGVDGPLKLSINSYREET---RGVTVFGTRAPGVDSWFLIQR-----------------KRASKKGSKGR-QYVRAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPHLHSNGKRTHGI-----------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGADRPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQNSID 1053
R+R NNT ++ VGVDGP+ L INSYREET +GVTVFG RAP +WFLI S++ G VR PTRTELLSLSDVLKRAEP QG+MPL EAWG +LLQRACLVFE MLV+H YLTD+KVK+ SGSR+DANEWVR GKYLR NQP LHS+GKRTHGI T+ TLELE P KTA+NVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQ+ELELA +RIHATTVAD R+PFGVLETL PPSHPSLP ALEALVC++ G P C+ NSTP+ARMEMWFLSADTNSGEA RS +AY NLMS+AQFC T+RS L+NSI+
Sbjct: 413 RLRINNTYENAVGVDGPINLDINSYREETSTVKGVTVFGNRAPTTGAWFLITSVDPIMPAKGLARTVTAPSTGSERNDNGMASNVRTPTRTELLSLSDVLKRAEPEQGVMPLWEAWGIFLLQRACLVFEVMLVLHTYLTDSKVKKKSGSRLDANEWVRKGKYLRRNQPQLHSDGKRTHGIVRAIADSVTCDRLLPPTQHRYSHLDTSRSYLSLCWPGLTQQTISTLELERHPGKTASNVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQDELELATSRIHATTVADHRQPFGVLETLAPPSHPSLPPALEALVCTEAGGKCAPACIFNSTPIARMEMWFLSADTNSGEAVRSPAAYNNLMSEAQFCRHTVRSMLKNSIE 792 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352674 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15288 ID=mRNA_15288|Name=jgi.p|Trimin1|352674|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2201bp|location=Sequence derived from alignment at Contig_128:63506..70932- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGACGTGGACGGGCGGAGGTGCTGGGTGCGAGGTTCGATCACGTCATTback to top protein sequence of jgi.p|Trimin1|352674 >Trimin1|352674|estExt_Genemark1.C_Ctg_1280008 ID=Trimin1|352674|estExt_Genemark1.C_Ctg_1280008|Name=jgi.p|Trimin1|352674|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=706bp MDVDGRRCWVRGSITSFEAVDSHRLIMLTLQRDRVRTNNTIQDDVGVDGPback to top mRNA from alignment at Contig_128:63506..70932- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15288 ID=mRNA_15288|Name=jgi.p|Trimin1|352674|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7427bp|location=Sequence derived from alignment at Contig_128:63506..70932- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_128:63506..70932- >mRNA_15288 ID=mRNA_15288|Name=jgi.p|Trimin1|352674|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2118bp|location=Sequence derived from alignment at Contig_128:63506..70932- (Tribonema minus UTEX_B_3156 )back to top |