mRNA_14169 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|175457
Unique NamemRNA_14169
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|175457 vs. uniprot
Match: A0A835ZAD2_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD2_9STRA)

HSP 1 Score: 753 bits (1945), Expect = 9.490e-275
Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 1
Query:    1 MSGIRQRGREPTPADAVAQQSVRHSHHVANTSRSPRHRGAGQGSLVLTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQDAYQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVKPEGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAFSTLHSTDKHVVTHYNHNAEEVMVDHVWVLGLADSQHQRRGESPEGESQQEGEGGAGAPGLSIGKALLLPKGVDDSRWNRSFALSDHRPLQVRIDWPQAQARSARDAQA 1146
            MSGIRQRGREPTPADAVAQQSVRHSHHVANTSRSPRHRGAGQGSLVLTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQDAYQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVKPEGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAFSTLHSTDKHVVTHYNHNAEEVMVDHVWVLGLADSQHQRRGESPEGESQQEGEGGAGAPGLSIGKALLLPKGVDDSRWNRSFALSDHRPLQVRIDWPQAQARSARDAQA
Sbjct:    1 MSGIRQRGREPTPADAVAQQSVRHSHHVANTSRSPRHRGAGQGSLVLTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQDAYQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVKPEGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAFSTLHSTDKHVVTHYNHNAEEVMVDHVWVLGLADSQHQRRGESPEGESQQEGEGGAGAPGLSIGKALLLPKGVDDSRWNRSFALSDHRPLQVRIDWPQAQARSARDAQA 382          
BLAST of jgi.p|Trimin1|175457 vs. uniprot
Match: A0A6H5KYQ9_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYQ9_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 9.220e-77
Identity = 151/342 (44.15%), Postives = 204/342 (59.65%), Query Frame = 1
Query:  139 LTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESL--KETWQGRPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQDAYQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVKPEG------GRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAFSTLHSTDKHVVTHYNHNAEEVMVDHVWVL--GLADSQHQRRGESPEGESQQEGEGGAGAPGL--------SIGKALLLPKGVDDSRWNRSFALSDHRPLQVRIDWP 1110
            LTTFNLLAP YKR+  +             P GG+   L        R +RESE D +WR RA  TV+F+   M+ SDIIC QE+W   AY  +F+  LE++Y F+T +RTG K+DG+A+LLR+G     +  G+SL  IG+RVAL++H++  G      G D +L N HL FPHN  DR  Q  QI+ VT  ++    + GL   TPRV+VGD NVEE+DPVC HL   G++SAF++LH  ++ V+TH NH  E+VM DHV+V   G A    +RRG+S    +  E       PGL        S+ +AL+LP  VD + W  +F+LSDHRPL VR+ +P
Sbjct:   66 LTTFNLLAPCYKRMHSEV----------STPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWLDPAYHAIFQSALEEDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQLGLSLSCIGDRVALIMHLRESGAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVEGMMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHR-ERRVITHRNHRGEDVMCDHVFVKAPGFAG---RRRGDSVAPATAPE------IPGLVPRLCENVSVEEALVLPGEVDAAEWCPNFSLSDHRPLTVRLKFP 387          
BLAST of jgi.p|Trimin1|175457 vs. uniprot
Match: A0A7S3A7G3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A7G3_9RHOD)

HSP 1 Score: 157 bits (398), Expect = 1.690e-41
Identity = 111/327 (33.94%), Postives = 167/327 (51.07%), Query Frame = 1
Query:  130 SLVLTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQDAYQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVK-PEGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAFSTLHSTDKHVVTHYNHNAEEVMVDHVWVLG-LADSQHQRRGESPEGESQQEGEGGAGAPGLSIGKALLLPKGVDDSRWNRSFALSDHRPLQVRID 1104
            ++ + TFN+LAP Y+R+DE +++ + +    + P G          + RP RES+   +W AR      FVK  +   D++C QE+WF + Y   F +   ++Y  F+ QRTG KADG+  +LR+G       Q +     GNRVALLL  +  + G   ++ N HLTFPH+  DR L+Q QI  +   +D F ++ GL  + P +I GD N + +DPVCAHLR   + ++F  +   +  V TH NH  E V VDH+W    +  S    R E+    S  E         L     ++ P+  D   W   F LSDHR + +  +
Sbjct:    5 TMSVATFNVLAPCYRRLDELSVKVQVVEKSGIGP-GNFGR------RPRP-RESQFRDLWSARCSEMCAFVKADVF--DVVCLQEFWFDEGYVSKFSDCFMKDYELFSAQRTGGKADGLLTMLRRGKFHVEHMQKLEFKDAGNRVALLLCARLADVGSLLIIVNTHLTFPHHEHDRVLRQGQISKLVEFIDGFVDRHGLE-NVPVIIGGDMNGDHADPVCAHLRANCFVNSFVQVSGLED-VETHLNHRNERVFVDHIWYRKHIYGSPISGRLETDSSGSDDE----LRDTHLVPRDFIVKPQSEDLKPWVDDFQLSDHRLVSITFE 315          
BLAST of jgi.p|Trimin1|175457 vs. uniprot
Match: A0A482S2T6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2T6_9ARCH)

HSP 1 Score: 145 bits (367), Expect = 1.860e-37
Identity = 93/231 (40.26%), Postives = 131/231 (56.71%), Query Frame = 1
Query:  139 LTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECDAMWRARARSTVEFVKESMTGS-DIICFQEYWFQDAYQELFREQLEQE-YSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVKP-EGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAF 822
            + +FNLLAPVYKR+            QSVD   G  +           RES+ + +W ARA  T +F +  + GS DII  QE+W   AY+ +F ++  Q  Y     +R G K DG+A++++        ++ V L ++G+RVALLL +K  E G+D L+AN HL+FPH+  DR  Q  Q+Q +T  +D FA +  +   T RVI+GDFNVE   PVC HLR +GY S F
Sbjct:   55 IVSFNLLAPVYKRL------------QSVDITTGFRK-----------RESQKEELWGARALRTADFFRREVLGSTDIIGLQEFWLDSAYRHIFEDEFAQAGYDVHVLKRPGKKLDGVALVIKSQDFEVLGSEHVFLSTLGDRVALLLWLKHRESGKDLLVANTHLSFPHSTADRLDQMTQMQNLTGVIDTFAHRYHIDYAT-RVIMGDFNVESKSPVCNHLRSVGYASCF 261          
BLAST of jgi.p|Trimin1|175457 vs. uniprot
Match: A0A024G3R7_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G3R7_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.520e-28
Identity = 94/277 (33.94%), Postives = 140/277 (50.54%), Query Frame = 1
Query:   91 TSRSPRHRGAGQGSLVLTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQDAYQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHV--KPEGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAFSTLHSTDKHVVTHYNHNAEEVMVDHVWVLGL 915
            T  SPRH       + L TFN+LAP Y R                   GGL+ES             E + ++ ARA+  V+F+++     D+IC QEYWF  +YQ +F    +  ++  T +R G K DG+AIL+ K          V+    G+RVA+++H+  KP   + FLL N HLTFPH    +Q +  QIQ V  ++  + +Q  L  + P ++ GDFN + +DPV   + + GY+S F  +H  +  + TH NH   EV VD ++  GL
Sbjct:   10 TQSSPRH-------ISLMTFNILAPCYFR------------------HGGLVES-------------EYEHLYVARAQELVQFIQKQCC--DVICLQEYWFNQSYQNIFHSAFQHSHTIHTIKRPGIKQDGLAILVNKQKLKI---NFVNPIQAGDRVAMMMHLTMKPLH-QSFLLINSHLTFPHGHEYKQTRLSQIQLVLNSIQGYKDQHNLQ-EMPVLLCGDFN-DYNDPVHEKVLENGYQSVFQQIHGREARI-THCNHKNREVGVDFIFASGL 239          
BLAST of jgi.p|Trimin1|175457 vs. uniprot
Match: F0WDT8_9STRA (Uncharacterized protein AlNc14C69G4806 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDT8_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.850e-28
Identity = 88/261 (33.72%), Postives = 134/261 (51.34%), Query Frame = 1
Query:  139 LTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQDAYQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVK-PEGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAFSTLHSTDKHVVTHYNHNAEEVMVDHVWVLGLA 918
            L TFN+LAP Y R                   GGLLES             + + ++  RA+  V+F+ +     D+IC QEYWF  +Y+ +F    +  ++  T +R G K DG+AIL+ K        Q V+    G+RVA+++H+   +  + FLL N HLTFPH    ++++  QIQ V  ++  + EQ  L V  P ++ GDFN + +DPV   + D GY+S F  +H  +  + TH NH   EV VD ++  GL+
Sbjct:   24 LMTFNILAPCYFR------------------HGGLLES-------------DFEQVYVTRAQEIVQFIHKQCC--DVICLQEYWFNQSYERIFHSAFQHSHTIHTIKRPGIKQDGLAILVNKQKLDI---QFVNPIQAGDRVAMMMHLTLKQPYQSFLLINSHLTFPHGQEYKEIRLSQIQLVLNSVQGYMEQHNLQV--PVLLCGDFN-DHNDPVHQKVLDNGYRSVFEVVHGREARI-THCNHKNREVGVDFIFASGLS 244          
BLAST of jgi.p|Trimin1|175457 vs. uniprot
Match: A0A814LJW7_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814LJW7_9BILA)

HSP 1 Score: 123 bits (308), Expect = 2.150e-28
Identity = 101/339 (29.79%), Postives = 155/339 (45.72%), Query Frame = 1
Query:  133 LVLTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQDAYQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVS-----LCSIGNRVALLLHVK-----PEGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIVGDFN-VEESDPVCAHL-RDLGYKSAFSTLHSTDKHVVTHYNHNAEEVMVDHVWVLGLADSQHQRRGESPEGESQQEGEGGAGAPGLSIGKALLLPKGVDDSRWNRSF--------ALSDHRPL 1089
            L++ TFN+LAPVYKR++ ++                              RESE D +W+ R    +E +K   T + I+C QE+WF   + +L+   L +EY FF +QRT +  DG+ IL+ K        + +      L  +GNRV LLL ++          DFLL N HLTFPHN FDR L+ +QI+ +   L ++     L  D   V+ GDFN   E D V  +L  D  Y S++  L++ + +V TH  H    + VD ++    +    +     P                     + L+P G ++ +W+R +        ALSDHR +
Sbjct:   42 LIVATFNILAPVYKRLESES-----------------------------HRESENDKLWKPRHSHIIELLKS--TSAHILCLQEFWFNQDFIQLYESDLSKEYKFFYRQRTHYADDGLVILISKQEQNGFKLEIIDRHDCLLYDVGNRVGLLLRLRLTIIDTNQTSDFLLLNLHLTFPHNSFDRNLRFEQIKALFKHLKDYQHTHQLE-DCSVVLCGDFNSAAEGDSVYDYLTNDQHYISSYKELNNKEPNV-THLTHLGTALGVDFIFYRNFSTVDQKFVKFKPI-------------------TSYLIPHGSNEQKWDRKWDLNGLTTKALSDHRMI 328          
BLAST of jgi.p|Trimin1|175457 vs. uniprot
Match: W7U4G6_9STRA (Calcium-binding endonuclease exonuclease phosphatase family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4G6_9STRA)

HSP 1 Score: 119 bits (299), Expect = 6.090e-26
Identity = 93/307 (30.29%), Postives = 148/307 (48.21%), Query Frame = 1
Query:  124 QGSLVLTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQD-AYQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVKP-------EGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAE---QEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAFSTLHSTD-KHVVTHYNHNAEEVMVDHVWVLGLADSQHQRRGESPEGESQQEGEGGAGAPGLSI 1008
            Q  + ++TFN+LAP YKR+ +                GG              RE++      +RA  T  F++  +  +DIIC QE++ QD  Y  LF   L   Y F+   R   K DG+ +LLRKG      A+G +L   G+RV LL+ ++        + G+  +L + HL+FPHN FD   Q +Q+  +T  L+ + +     G   D  +++ GDFNV+ ++PV A +  LG++         D    VTH  H  ++V VDH++      ++H+RRG +  G + +E     G  G +I
Sbjct:  148 QQDISISTFNILAPCYKRMKD----------------GG--------------READFPERMESRALETAAFIRRELD-TDIICLQEFFVQDEGYTTLFSSSLADAYDFYLHPRPSKK-DGLGVLLRKGKFRLHGARGATLSRWGSRVGLLMDLETLAGATSEQEGQRIILLSTHLSFPHNRFDENQQHRQVSSLTRMLEAYVKGCPALGGQRDVLQILCGDFNVDLTNPVLAPIHALGFQHVREEGERGDGADFVTHRTHRGDDVAVDHIFYRSFNAARHRRRGAT--GNTSEEDPRSRGPEGATI 420          
BLAST of jgi.p|Trimin1|175457 vs. uniprot
Match: A0A4D9D791_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D791_9STRA)

HSP 1 Score: 117 bits (293), Expect = 3.300e-25
Identity = 91/306 (29.74%), Postives = 148/306 (48.37%), Query Frame = 1
Query:  124 QGSLVLTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQD-AYQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVKP-------EGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAE---QEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAFSTLHSTDK-HVVTHYNHNAEEVMVDHVWVLGLADSQHQRRG---ESPEGESQQEGEGGAGAP 996
            Q  + ++TFN+LAP YKR+ +                GG              RE++      +RA  T  F++  +  +DIIC QE++ QD  Y  LF   L   Y F+   R   K DG+ +LL+KG      A+G +L   G+RV LL+ ++        + G+  +L + HL+FPHN FD   Q +Q+  +T  L+ + +     G   D  +++ GDFNV+ ++PV   +  LG++         D+ + VTH  H  ++V VDH++      ++H+ RG    SPE + +  G  G+  P
Sbjct:  120 QQDISISTFNILAPCYKRMKD----------------GG--------------READFPERMESRAEETAAFIRRELD-TDIICLQEFFMQDEGYTTLFSSSLADAYDFYLHPRPSKK-DGLGVLLKKGKFRVHGARGATLSRWGSRVGLLMDLETLAGATSEQEGQRIILLSTHLSFPHNRFDENQQHRQVSSLTRMLEAYVKGCPALGGQRDVLQILCGDFNVDLTNPVLGPIHALGFQHVREEGGRRDEANFVTHRTHRGDDVAVDHIFYRSFNAARHRWRGATVNSPEEDPRNRGAEGSIMP 393          
BLAST of jgi.p|Trimin1|175457 vs. uniprot
Match: A0A814UTH2_9BILA (Hypothetical protein n=6 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A814UTH2_9BILA)

HSP 1 Score: 112 bits (280), Expect = 1.140e-24
Identity = 86/329 (26.14%), Postives = 148/329 (44.98%), Query Frame = 1
Query:  130 SLVLTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQDA-YQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVKPEGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAFSTLHSTDKHVVTHYNHNAEEVMVDHVWVLGLADSQHQRRGESPEGESQQEGEGGAGAPGLSIGKALLLPKGVDDSRWN--RSFALSDHRPLQVRIDW 1107
            +L + TFN+LAP YKR+  +                               RES  +++W  R  S +  ++      D+IC QE+WF++  + +L++  L  +YSF+T QRTG   DG+AIL+            + L  IGNR+ +LL+++   G++ L+ N HLTFPHN F+R+++ +Q+      + ++ +   L      ++ GDFN    +     L +  ++S+F  +H  + HV TH  H  E++ VD ++                                L    + L+P G +   WN    + LSDHR +  +  +
Sbjct:   35 TLSVCTFNVLAPCYKRLSSEK-----------------------------DRESLHESLWHRRHSSIINLLQSLEI--DLICLQEFWFKNPLFIQLYKANLSPKYSFYTLQRTGFLDDGLAILIDSNRVKFIDRYDMKLHDIGNRIGILLNLE-FNGKNILVINLHLTFPHNRFERRVRLKQMIKFLELIHKYQQANNLLNQCSIILSGDFNTTYYNDNVYQLIEKDFQSSFKFIHGYEPHV-THLTHRREQLAVDFIFYKSNI---------------------------LQPMSSELIPLGCNHLFWNDHTHWTLSDHRAIVTKFKY 303          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175457 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZAD2_9STRA9.490e-275100.00Endonuclease/exonuclease/phosphatase n=1 Tax=Tribo... [more]
A0A6H5KYQ9_9PHAE9.220e-7744.15Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A7S3A7G3_9RHOD1.690e-4133.94Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A482S2T6_9ARCH1.860e-3740.26Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A024G3R7_9STRA1.520e-2833.94Endo/exonuclease/phosphatase domain-containing pro... [more]
F0WDT8_9STRA1.850e-2833.72Uncharacterized protein AlNc14C69G4806 n=1 Tax=Alb... [more]
A0A814LJW7_9BILA2.150e-2829.79Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
W7U4G6_9STRA6.090e-2630.29Calcium-binding endonuclease exonuclease phosphata... [more]
A0A4D9D791_9STRA3.300e-2529.74Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A814UTH2_9BILA1.140e-2426.14Hypothetical protein n=6 Tax=unclassified Rotaria ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_125contigContig_125:339228..342118 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|175457|e_gw1.125.63.1
BRITEko00000,ko00001,ko00002,ko01000,ko03019,ko03029
KEGG rclassRC00032
KEGG ReactionR05636
KEGG ModuleM00096
KEGG Pathwayko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130
KEGG koko:K01662,ko:K18729,ko:K19612
EC2.2.1.7,3.1.13.4
DescriptionAngel homolog
COG categoryA
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5239@1|root,KOG2338@2759|Eukaryota
Evalue3.05e-80
Seed ortholog2880.D7FL44
Hectar predicted targeting categoryother localisation
TranscriptId175779
TrackFilteredModels1
ProteinId175457
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175457gene_14169Tribonema minus UTEX_B_3156 geneContig_125 339228..342118 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175457Trimin1|175457|e_gw1.125.63.1Tribonema minus UTEX_B_3156 polypeptideContig_125 339228..342118 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14169_3exon_14169_3Tribonema minus UTEX_B_3156 exonContig_125 339228..339488 -
exon_14169_2exon_14169_2Tribonema minus UTEX_B_3156 exonContig_125 340439..340697 -
exon_14169_1exon_14169_1Tribonema minus UTEX_B_3156 exonContig_125 341490..342118 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14169CDS_14169Tribonema minus UTEX_B_3156 CDSContig_125 341490..342118 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14169 ID=mRNA_14169|Name=jgi.p|Trimin1|175457|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1149bp|location=Sequence derived from alignment at Contig_125:339228..342118- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCGGCATCAGGCAGAGGGGACGCGAGCCGACACCTGCAGACGCTGT
GGCACAGCAATCAGTGCGTCATAGCCACCACGTCGCGAACACCAGCAGAA
GCCCTCGCCACCGGGGAGCGGGTCAAGGCAGCCTGGTTCTTACGACGTTT
AACCTGCTTGCGCCGGTCTACAAGAGGATCGACGAGCAAGCGCTGCGGAA
AGAGGGTCTTCGGCCACAGTCGGTCGACCCTGAAGGTGGACTGCTAGAGT
CACTGAAGGAGACCTGGCAGGGCAGGCCTTCCAGGGAGAGCGAGTGCGAT
GCCATGTGGAGGGCCAGGGCTCGCAGCACGGTCGAATTCGTGAAGGAGTC
GATGACGGGCAGCGACATCATCTGCTTTCAGGAGTACTGGTTCCAGGATG
CCTACCAGGAGCTGTTTCGCGAGCAGCTCGAGCAGGAGTACTCTTTCTTC
ACCAAGCAGCGGACGGGGCACAAGGCAGATGGCATCGCGATTCTGTTGCG
GAAGGGCAGCGCGGCGGCTGCTGCAGCACAAGGAGTGTCGCTCTGCAGCA
TTGGAAACCGGGTGGCGCTGCTGTTGCACGTGAAGCCGGAGGGAGGACGG
GACTTCCTGTTGGCAAACTGCCACCTCACCTTCCCGCACAATCTGTTTGA
CCGGCAGCTGCAGCAGCAGCAAATACAGGGCGTGACGGCGGCGCTGGATG
AGTTTGCGGAACAGGAGGGGCTGGCGGTTGACACGCCGCGCGTCATAGTC
GGGGACTTCAATGTTGAAGAATCGGACCCGGTGTGCGCGCATCTGCGGGA
CCTGGGGTACAAGAGCGCCTTCAGCACTCTGCACTCCACGGACAAGCACG
TGGTGACGCACTACAATCACAACGCCGAGGAAGTCATGGTCGACCATGTT
TGGGTTTTGGGGCTGGCTGATTCGCAGCATCAGCGCAGGGGGGAGTCGCC
GGAGGGGGAATCGCAGCAGGAAGGGGAGGGGGGAGCAGGGGCACCCGGGC
TCAGCATCGGTAAAGCGCTGCTGCTGCCAAAGGGCGTGGACGATAGCCGG
TGGAACCGGAGTTTTGCCCTTAGCGACCACCGGCCATTACAGGTCAGGAT
AGACTGGCCACAGGCACAGGCCCGATCTGCGCGCGACGCACAGGCGTGA
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protein sequence of jgi.p|Trimin1|175457

>Trimin1|175457|e_gw1.125.63.1 ID=Trimin1|175457|e_gw1.125.63.1|Name=jgi.p|Trimin1|175457|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=383bp
MSGIRQRGREPTPADAVAQQSVRHSHHVANTSRSPRHRGAGQGSLVLTTF
NLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECD
AMWRARARSTVEFVKESMTGSDIICFQEYWFQDAYQELFREQLEQEYSFF
TKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVKPEGGR
DFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIV
GDFNVEESDPVCAHLRDLGYKSAFSTLHSTDKHVVTHYNHNAEEVMVDHV
WVLGLADSQHQRRGESPEGESQQEGEGGAGAPGLSIGKALLLPKGVDDSR
WNRSFALSDHRPLQVRIDWPQAQARSARDAQA*
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mRNA from alignment at Contig_125:339228..342118-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14169 ID=mRNA_14169|Name=jgi.p|Trimin1|175457|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2891bp|location=Sequence derived from alignment at Contig_125:339228..342118- (Tribonema minus UTEX_B_3156 )
ATGAGCGGCATCAGGCAGAGGGGACGCGAGCCGACACCTGCAGACGCTGT GGCACAGCAATCAGTGCGTCATAGCCACCACGTCGCGAACACCAGCAGAA GCCCTCGCCACCGGGGAGCGGGTCAAGGCAGCCTGGTTCTTACGACGTTT AACCTGCTTGCGCCGGTCTACAAGAGGATCGACGAGCAAGCGCTGCGGAA AGAGGGTCTTCGGCCACAGTCGGTCGACCCTGAAGGTGGACTGCTAGAGT CACTGAAGGAGACCTGGCAGGGCAGGCCTTCCAGGGAGAGCGAGTGCGAT GCCATGTGGAGGGCCAGGGCTCGCAGCACGGTCGAATTCGTGAAGGAGTC GATGACGGGCAGCGACATCATCTGCTTTCAGGAGTACTGGTTCCAGGATG CCTACCAGGAGCTGTTTCGCGAGCAGCTCGAGCAGGAGTACTCTTTCTTC ACCAAGCAGCGGACGGGGCACAAGGCAGATGGCATCGCGATTCTGTTGCG GAAGGGCAGCGCGGCGGCTGCTGCAGCACAAGGAGTGTCGCTCTGCAGCA TTGGAAACCGGGTGGCGCTGCTGTTGCACGTGAAGCCGGAGGGAGGACGG GACTTCCTGTTGGCAAACTGCCACCTCACGTGAGTCGTGTGTTATGCTCG CTCGCCCTAGATGCGTTAGATCCGACATCTGGTGCTGGTGCAGTCCGCAA GTGCGATGCAATATGATATAAATGCGCTGATCGTAGGCGTCAGTGATCGT AGGCGTTAGTTAGCCTTGCGCCAGCAAACACTAGCACTGCACAAGCACGC CATCGTGGGGCTCAGCTTGGTATGCTTTTGTTCTGGGCCTTCAGCAGTTC TTGTGATGTGTGTACAAGATTTGAGTTGCCTCCACTTCAAAGCGACACGC ATCATCAACGTCCTGTAGCTTGCAAACAACTGTTCTCACCAGGTTGATCC CACAATTCGCACCACATTGCAGGTGTCTTGCAATACTCCTGTGCAGCCAC CATCAGATGCCTAGCCCTCCAGTTGTCGATTTCAGCCCTCGTCACATGTG GTGTGCCTTGGTTTTTACCTTGGTCGCACCCTCAGCATACTCCACACTGT TCAACGAGCCCTGCATTTGAGCCAATGCTTGTTGCACAATTATGAAAACG ATTGCTGGCTTGGCAGCGAACTGCACAAACAGGCATCATTGGAGGCGTTC ATCCGCCCTCAGCAACAATGCGCTCCCCATGCTGCATTGTTGCAATAGAC GCCACCACCACATCACAGCCACGAGGGCGCCGATGAAGCAGCTCATGAGC ACACTTCCTGCGCGCCGTCAAGTTAAACACAGTGTTGAAGTACGCCTCCT CCGCAGGAACGCTCAGTCAAGTGTGCCACTTACGCACAAAACACACCTTT TTGCTCCTTCCTGCTTCGCAGCTTCCCGCACAATCTGTTTGACCGGCAGC TGCAGCAGCAGCAAATACAGGGCGTGACGGCGGCGCTGGATGAGTTTGCG GAACAGGAGGGGCTGGCGGTTGACACGCCGCGCGTCATAGTCGGGGACTT CAATGTTGAAGAATCGGACCCGGTGTGCGCGCATCTGCGGGACCTGGGGT ACAAGAGCGCCTTCAGCACTCTGCACTCCACGGACAAGCACGTGGTGACG CACTACAATCACAACGCCGAGGAAGTCATGGTGAGTAGGCCAGCCTTTCA TGTAATGATGAACATGGTTGCCTACAGAGTGTCCTTTGTAAGTATCATAG AGACAGAGTGGCTCTGCAGTCCGTTGAGGAGAGGTGCTCGCACACGTTGT TCGCCATTGTGCATGCGGTGGCAGCAAATTGGTGTGTTCCTGGCACCAGC AAGAATTTGTCAGGTTGGCATACAGCTGCTGCTTCACAGTGCGATGGACG TGCAGCAGCGCTCAGAACGATGCAGCATCGTTCATGTGTCAGAATCGCCA TGTAAATCAGCTGCAAACGGTATGTGTGAGGCAGCGCGTGCGCAGGCGTG CGACTGAAGTAACGCGTGCTTCATCTCTGTGCGAGAATTGGAAATCCGCA TAGCGATCACCAAGTGATATGCATGCACGTAGATATCTTCAAGTTGTACT TCAAGTCAACTGTCATGTTGCCAGGATCTTGTGTACATATGCAGCTCACT GTCAATTGCTTGCAGGCGACAACAACTCACAGTGTGGATTTGTGCATTGG TGCCTCCATGCGTCAACGAACACAAGCGTGGTGACACCATGCTCACACTC AAGCATCCTACCACTTGAGGATTGGGGTCAAGGTTAGGGTTACGTGGGCA GACTGAGCAAATGCCAGGACGCGCTTTGCTTATTCAGTTGAATGATCAGC TGCTGTAAATGCCAGGACGCGCTTTGCTTATTCAGTTGAATGATCAGCTG CTGTGGCATATCTCAGCATGACAACGGATCAGCAAAACCAAGGGAACCTC GCCAATCGTCCGTGATGTACTGTGCTGACAAGCTCTGCTGTAGGACTCAA ATGCAGTGATTGTTCCTGCTGTCGCATTGCTCATCACCTCTAATTTGTGG CAACTTCACCTTCAGCACCAACTCTGATATGCATTGCTCACCAGCTGTGG TCTTGGCGCACTCCTGCGTGTCTATCTCAGGTCGACCATGTTTGGGTTTT GGGGCTGGCTGATTCGCAGCATCAGCGCAGGGGGGAGTCGCCGGAGGGGG AATCGCAGCAGGAAGGGGAGGGGGGAGCAGGGGCACCCGGGCTCAGCATC GGTAAAGCGCTGCTGCTGCCAAAGGGCGTGGACGATAGCCGGTGGAACCG GAGTTTTGCCCTTAGCGACCACCGGCCATTACAGGTCAGGATAGACTGGC CACAGGCACAGGCCCGATCTGCGCGCGACGCACAGGCGTGA
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Coding sequence (CDS) from alignment at Contig_125:339228..342118-

>mRNA_14169 ID=mRNA_14169|Name=jgi.p|Trimin1|175457|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1149bp|location=Sequence derived from alignment at Contig_125:339228..342118- (Tribonema minus UTEX_B_3156 )
ATGAGCGGCATCAGGCAGAGGGGACGCGAGCCGACACCTGCAGACGCTGT
GGCACAGCAATCAGTGCGTCATAGCCACCACGTCGCGAACACCAGCAGAA
GCCCTCGCCACCGGGGAGCGGGTCAAGGCAGCCTGGTTCTTACGACGTTT
AACCTGCTTGCGCCGGTCTACAAGAGGATCGACGAGCAAGCGCTGCGGAA
AGAGGGTCTTCGGCCACAGTCGGTCGACCCTGAAGGTGGACTGCTAGAGT
CACTGAAGGAGACCTGGCAGGGCAGGCCTTCCAGGGAGAGCGAGTGCGAT
GCCATGTGGAGGGCCAGGGCTCGCAGCACGGTCGAATTCGTGAAGGAGTC
GATGACGGGCAGCGACATCATCTGCTTTCAGGAGTACTGGTTCCAGGATG
CCTACCAGGAGCTGTTTCGCGAGCAGCTCGAGCAGGAGTACTCTTTCTTC
ACCAAGCAGCGGACGGGGCACAAGGCAGATGGCATCGCGATTCTGTTGCG
GAAGGGCAGCGCGGCGGCTGCTGCAGCACAAGGAGTGTCGCTCTGCAGCA
TTGGAAACCGGGTGGCGCTGCTGTTGCACGTGAAGCCGGAGGGAGGACGG
GACTTCCTGTTGGCAAACTGCCACCTCACCTTCCCGCACAATCTGTTTGA
CCGGCAGCTGCAGCAGCAGCAAATACAGGGCGTGACGGCGGCGCTGGATG
AGTTTGCGGAACAGGAGGGGCTGGCGGTTGACACGCCGCGCGTCATAGTC
GGGGACTTCAATGTTGAAGAATCGGACCCGGTGTGCGCGCATCTGCGGGA
CCTGGGGTACAAGAGCGCCTTCAGCACTCTGCACTCCACGGACAAGCACG
TGGTGACGCACTACAATCACAACGCCGAGGAAGTCATGGTCGACCATGTT
TGGGTTTTGGGGCTGGCTGATTCGCAGCATCAGCGCAGGGGGGAGTCGCC
GGAGGGGGAATCGCAGCAGGAAGGGGAGGGGGGAGCAGGGGCACCCGGGC
TCAGCATCGGTAAAGCGCTGCTGCTGCCAAAGGGCGTGGACGATAGCCGG
TGGAACCGGAGTTTTGCCCTTAGCGACCACCGGCCATTACAGGTCAGGAT
AGACTGGCCACAGGCACAGGCCCGATCTGCGCGCGACGCACAGGCGTGA
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