Trimin1|352543|estExt_Genemark1.C_Ctg_1230007 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|352543
Unique Name	Trimin1\|352543\|estExt_Genemark1.C_Ctg_1230007
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	303

Homology

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BLAST of jgi.p|Trimin1|352543 vs. uniprot
Match: A0A835ZD16_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD16_9STRA)

HSP 1 Score: 578 bits (1489), Expect = 6.040e-208
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0

Query:    1 MCRQTRRRAPPSLVLNLEAAIYQQCGVDSPPSSYEAAPRLVRRKPTSLSLNIAVEEQHKDAFATEQAARILDWLAIAGEDITLDKDAMKAMGITHIINCTRHCPNLFPDHSGQPVPTEGFHYLKLSLQDSIDQDITSALAPSFRMIEEARACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPNPGFVSQLLDLEHVVHACHTLDLGKYCEDRFASTASWTPEVSSXXXXXXXXXXXXXXGSSGDETASPRRPRCSSNAVRSSRHCSFFADEEEDGDLAAPARRTA 302
            MCRQTRRRAPPSLVLNLEAAIYQQCGVDSPPSSYEAAPRLVRRKPTSLSLNIAVEEQHKDAFATEQAARILDWLAIAGEDITLDKDAMKAMGITHIINCTRHCPNLFPDHSGQPVPTEGFHYLKLSLQDSIDQDITSALAPSFRMIEEARACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPNPGFVSQLLDLEHVVHACHTLDLGKYCEDRFASTASWTPEVSSXXXXXXXXXXXXXXGSSGDETASPRRPRCSSNAVRSSRHCSFFADEEEDGDLAAPARRTA
Sbjct:    1 MCRQTRRRAPPSLVLNLEAAIYQQCGVDSPPSSYEAAPRLVRRKPTSLSLNIAVEEQHKDAFATEQAARILDWLAIAGEDITLDKDAMKAMGITHIINCTRHCPNLFPDHSGQPVPTEGFHYLKLSLQDSIDQDITSALAPSFRMIEEARACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPNPGFVSQLLDLEHVVHACHTLDLGKYCEDRFASTASWTPEVSSXXXXXXXXXXXXXXGSSGDETASPRRPRCSSNAVRSSRHCSFFADEEEDGDLAAPARRTA 302

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BLAST of jgi.p|Trimin1|352543 vs. uniprot
Match: A0A1V9Z4X6_9STRA (Dual specificity protein phosphatase 2-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4X6_9STRA)

HSP 1 Score: 129 bits (325), Expect = 5.210e-33
Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 0

Query:   67 AARILDWLA-IAGEDITLDKDAMKAMGITHIINCTRHCPNLFPDHSGQPVPTEGFHYLKLSLQDSIDQDITSALAPSFRMIEEARACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPNPGFVSQLLDLEHVVHACHTLDLGKYCEDRFA 231
            A ++LD L  I G D   D  A+ +MG+THI+NCTR  P+ FP+H           YL++++ D  +  I +    +   I +A      CLVHCS GMSRSATI +AYL+ HR M LL+A+   + RRR  SPN GF+ +L++LE  VH   +LDL +Y +DRFA
Sbjct:   31 ATQLLDGLLFIGGNDCVNDLPALLSMGVTHIVNCTRETPDYFPEH---------VEYLRVAVTDEPEVAIDAFFDEACSFINKAVDNKRACLVHCSHGMSRSATIVLAYLISHRGMQLLEALDYLRARRRVVSPNVGFMQRLVELEIKVHHAASLDLQEYKKDRFA 187

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BLAST of jgi.p|Trimin1|352543 vs. uniprot
Match: A0A067CZI3_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CZI3_SAPPC)

HSP 1 Score: 128 bits (321), Expect = 2.090e-32
Identity = 72/166 (43.37%), Postives = 95/166 (57.23%), Query Frame = 0

Query:   67 AARILDWLA-IAGEDITLDKDAMKAMGITHIINCTRHCPNLFPDHSGQPVPTEGFHYLKLSLQDSIDQDITSALAPSFRMIEEARACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPNPGFVSQLLDLEHVVHACHTLDLGKYCEDRFA 231
            A R+LD L  I G D   D D +  M I+H++NCTR  PN FPD            YL++ + D  + +I      +   I +A      C+VHCS GMSRSATI +AYLV+ R M LLDA+   +  RR  SPN GF+ +LL+LE  VH  ++LDL  Y +DRFA
Sbjct:   32 ATRLLDGLLYIGGNDCVNDLDVLGTMDISHVVNCTRETPNYFPDR---------VEYLRVPITDEPEMEIDMYFDDACAFIHKAVENHMACMVHCSHGMSRSATIVLAYLVKIRKMRLLDALQYLRSLRRVVSPNIGFMQRLLELEMAVHDANSLDLQAYTKDRFA 188

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BLAST of jgi.p|Trimin1|352543 vs. uniprot
Match: A0A835ZGG2_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGG2_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.360e-31
Identity = 72/165 (43.64%), Postives = 101/165 (61.21%), Query Frame = 0

Query:   70 ILDWLAIAGEDITLDKDAMKAMGITHIINCTRHCPNLFPDHSGQPVPTEGFHYLKLSLQDSIDQDITSALAPSFRMIEEARACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPNPGFVSQLLDLE-HVVHACHTLDLGKYCEDRFAST 233
            IL  L +    +  D+DA++  GI+HIINCT   P  FP+H         F+YL + L+DS DQ I   L   F++I+EAR    CCLVHCS+GMSRSA+I IAYL++   M+LL+A+   ++RR   SPN GF+++L   E  +  A  +L L  Y  DRF++T
Sbjct:   15 ILPSLLLGSATLAADQDALRRHGISHIINCTSRHP-YFPEH---------FNYLCVPLRDSPDQPIREVLESCFQLIDEAREQDTCCLVHCSAGMSRSASIVIAYLMKREGMSLLEALGFARERRPSVSPNSGFMAELARYEADLFDAVTSLSLAAYRFDRFSTT 169

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BLAST of jgi.p|Trimin1|352543 vs. uniprot
Match: A0A024TLS3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TLS3_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.600e-31
Identity = 74/204 (36.27%), Postives = 112/204 (54.90%), Query Frame = 0

Query:   39 RLVRRKPTS----LSLNIAVEEQHK-----DAFATEQ-AARILDWLAIAGEDITLDKDAMKAMGITHIINCTRHCPNLFPDHSGQPVPTEGFHYLKLSLQDSIDQDITSALAPSFRMIEEARACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPNPGFVSQLLDLEHVVHACHTLDLGKYCEDRFAS 232
            + VRR+ +S    +++ IA +   +      +FA +    +ILD L + G  +  D  A++++GITH++NCT   PN F D            YL++ + D  +  I          I+ AR  G  CLVHCS GMSRSAT  + YL++   M++L+A+  T+  R   SPN GF+S+LLDLE   H   ++DL KY +DRFA+
Sbjct:    8 KFVRREDSSFWHVITMPIAAQRSLRLDDTMSSFAVQHDVTKILDGLYVGGRGVVDDLMAIQSLGITHVVNCTEDIPNFFDDT---------LEYLRVPVPDDPESPIDEYFPVVVHFIQNARDKGQTCLVHCSHGMSRSATFILVYLIERHGMSVLEALQYTRTLRPVISPNVGFMSKLLDLERHTHQLCSVDLQKYRKDRFAA 202

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BLAST of jgi.p|Trimin1|352543 vs. uniprot
Match: A0A485KY31_9STRA (Aste57867_13069 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KY31_9STRA)

HSP 1 Score: 124 bits (311), Expect = 5.470e-31
Identity = 72/166 (43.37%), Postives = 94/166 (56.63%), Query Frame = 0

Query:   69 RILDWLAIAGEDITLDKDAMKAMGITHIINCTRHCPNLFPDHSGQPVPTEG-FHYLKLSLQDSIDQDITSALAPSFRMIEEARACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPNPGFVSQLLDLE-HVVHACHTLDLGKYCEDRFAS 232
            +ILD L + G D   D   +K++GITH++NCT            +P   +G  HYL + + D  D  I       F  I+ AR  G  CLVHCS GMSRSAT  + YLV   NM++LDA+  T+  R   SPN GF+ +LLDLE H  H   +LDL KY +DRFA+
Sbjct:   27 KILDGLYVGGRDSVDDSATLKSLGITHVVNCTED----------KPTTVDGSIHYLHVPIADDPDVAIERHFDAVFGFIQSARENGKACLVHCSQGMSRSATFVLGYLVARHNMSVLDALQYTRTLRPVISPNVGFMQKLLDLEWHTRHRA-SLDLNKYRKDRFAA 181

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BLAST of jgi.p|Trimin1|352543 vs. uniprot
Match: A0A1V9YRT3_9STRA (Carbohydrate-binding protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YRT3_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.250e-28
Identity = 71/166 (42.77%), Postives = 96/166 (57.83%), Query Frame = 0

Query:   67 AARILDWLA-IAGEDITLDKDAMKAMGITHIINCTRHCPNLFPDHSGQPVPTEGFHYLKLSLQDSIDQDITSALAPSFRMIEEARACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPNPGFVSQLLDLEHVVHACHTLDLGKYCEDRFA 231
            A ++LD L  I G D   D   ++ M ITHI+NCTR  PN F +H         F YL++ + D  D +I          I +A      C+VHCS GMSRSATI +AYL+Q++ MTLL A+   +  RR  SPN GF+ QLL LE  ++  ++LDL +Y +DRFA
Sbjct:   35 ATKLLDGLLYIGGNDCVNDLLVLQTMDITHIVNCTRETPNYFTEH---------FEYLQIPINDDPDVNIDMYFEEICTFIHKAIENKMACMVHCSHGMSRSATIVLAYLMQYKEMTLLQALTYLRSLRRVVSPNIGFMQQLLTLELSIYQVNSLDLQEYKKDRFA 191

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BLAST of jgi.p|Trimin1|352543 vs. uniprot
Match: A0A835ZE77_9STRA (Protein-tyrosine phosphatase-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE77_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.560e-26
Identity = 61/152 (40.13%), Postives = 89/152 (58.55%), Query Frame = 0

Query:   74 LAIAGEDITLDKDAMKAMGITHIINCTRH-CPNLFPDHSGQPVPTEGFHYLKLSLQDSIDQDITSALAPSFRMIEEARACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPNPGFVSQLLDLEHVVHACHTLDLGK 224
            L + G D +LD   +++ GITHIINCTR  C +              F +L+++++D    +I+ A  P+  +I  AR  GG  LVHC  G+SRSATI +A+LV+H  MT LDA+   +  R   SPN GF++QLL+LE  +    T+D+ K
Sbjct:    1 LFLGGADCSLDYSELRSRGITHIINCTRGVCAD---------ARLADFTFLRVAVEDCPTVNISEAFEPACALIGTARDAGGATLVHCRKGISRSATIVLAWLVKHEGMTALDALRYLQSCRPLISPNAGFMAQLLELEQALRGQTTIDMDK 143

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BLAST of jgi.p|Trimin1|352543 vs. uniprot
Match: A0A835Z9L0_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L0_9STRA)

HSP 1 Score: 110 bits (274), Expect = 7.940e-26
Identity = 62/131 (47.33%), Postives = 78/131 (59.54%), Query Frame = 0

Query:   95 HIINCTRH-CPNLFPDHSGQPVPTEGFHYLKLSLQDSIDQDITSALAPSFRMIEEARACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPNPGFVSQLLDLEHVVHACHTLDLGK 224
            HIINCT     N  PD + + VP          L+D   ++I  A AP+  +I  AR  GG  LVHC  GMSRSATI +A+ V H  MTLL+A+   + +R   SPN GF++QLLDLEH VH C T+DL K
Sbjct:   33 HIINCTADIADNASPDFTWRRVP----------LEDHPAENIFRAFAPACAIIAAAREAGGATLVHCRKGMSRSATIALAFCVSHERMTLLEALRRLRAQRPSVSPNAGFMAQLLDLEHGVHGCTTVDLIK 153

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BLAST of jgi.p|Trimin1|352543 vs. uniprot
Match: A0A836CCP8_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 7.880e-24
Identity = 65/177 (36.72%), Postives = 93/177 (52.54%), Query Frame = 0

Query:   60 DAFATEQAARILDWLAIAGEDITLDKDAMKAMGITHIINCTRHCPNLFPDHSGQPVPTEGFHYLKLSLQDSIDQDITSALAPSFRMIEEARACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPNPGFVSQLLDLEHVV--HACHTLDLGKYCEDRFASTA 234
            D      ++ ILD+L +A   +  D +AM+ + I  +INCTR CPN +P         E   Y++L L+DS  Q I+         IE AR  GG CLVHC++G+SRSA + IAYL++ +   L  A+   + RR   SP P F++QL   E  +      T+ L  Y  +RFA  A
Sbjct:    9 DLDTATDSSSILDYLVVASATLAADLEAMRQLRIVIVINCTRSCPNFYP---------EELVYVQLGLEDSERQCISHCFEGVAAAIEHARTLGGVCLVHCTAGISRSAALAIAYLMRSQRWPLAAALAHVQARRPSASPRPAFMAQLAAYEVGLFGRGAATVCLDAYAANRFARAA 176

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352543 vs. uniprot

BLAST of jgi.p|Trimin1|352543 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZD16_9STRA	6.040e-208	100.00	Protein-tyrosine phosphatase-like protein n=1 Tax=...	[more]
A0A1V9Z4X6_9STRA	5.210e-33	43.37	Dual specificity protein phosphatase 2-like n=1 Ta...	[more]
A0A067CZI3_SAPPC	2.090e-32	43.37	Uncharacterized protein n=1 Tax=Saprolegnia parasi...	[more]
A0A835ZGG2_9STRA	1.360e-31	43.64	Protein-tyrosine phosphatase-like protein n=1 Tax=...	[more]
A0A024TLS3_9STRA	2.600e-31	36.27	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A485KY31_9STRA	5.470e-31	43.37	Aste57867_13069 protein n=1 Tax=Aphanomyces stella...	[more]
A0A1V9YRT3_9STRA	2.250e-28	42.77	Carbohydrate-binding protein n=1 Tax=Thraustotheca...	[more]
A0A835ZE77_9STRA	3.560e-26	40.13	Protein-tyrosine phosphatase-like protein (Fragmen...	[more]
A0A835Z9L0_9STRA	7.940e-26	47.33	Protein-tyrosine phosphatase-like protein n=1 Tax=...	[more]
A0A836CCP8_9STRA	7.880e-24	36.72	Protein-tyrosine phosphatase-like protein n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020422	Dual specificity protein phosphatase domain	SMART	SM00195	dsp_5	coord: 66..213 e-value: 1.7E-28 score: 110.7
IPR020422	Dual specificity protein phosphatase domain	PROSITE	PS50054	TYR_PHOSPHATASE_DUAL	coord: 66..216 score: 34.447193
IPR000340	Dual specificity phosphatase, catalytic domain	PFAM	PF00782	DSPc	coord: 82..211 e-value: 5.6E-29 score: 100.6
IPR029021	Protein-tyrosine phosphatase-like	GENE3D	3.90.190.10	Protein tyrosine phosphatase superfamily	coord: 47..217 e-value: 1.4E-41 score: 143.9
IPR029021	Protein-tyrosine phosphatase-like	SUPERFAMILY	52799	(Phosphotyrosine protein) phosphatases II	coord: 63..215
None	No IPR available	PIRSR	PIRSR036958-1	PIRSR036958-1	coord: 155..210 e-value: 2.5E-4 score: 17.2
None	No IPR available	PIRSR	PIRSR620405-1	PIRSR620405-1	coord: 63..212 e-value: 1.5E-22 score: 77.8
None	No IPR available	PIRSR	PIRSR000941-50	PIRSR000941-50	coord: 61..271 e-value: 8.8E-26 score: 88.6
None	No IPR available	PIRSR	PIRSR000939-1	PIRSR000939-1	coord: 58..236 e-value: 7.0E-35 score: 118.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..272
None	No IPR available	PANTHER	PTHR10159	DUAL SPECIFICITY PROTEIN PHOSPHATASE	coord: 69..272
None	No IPR available	CDD	cd14498	DSP	coord: 67..209 e-value: 3.45631E-49 score: 158.093
IPR016130	Protein-tyrosine phosphatase, active site	PROSITE	PS00383	TYR_PHOSPHATASE_1	coord: 158..168
IPR000387	Tyrosine-specific protein phosphatases domain	PROSITE	PS50056	TYR_PHOSPHATASE_2	coord: 137..194 score: 12.04793

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_123	contig	Contig_123:41000..42180 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352543	mRNA_14474	Tribonema minus UTEX_B_3156	mRNA	Contig_123 40844..42881 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|352543|estExt_Genemark1.C_Ctg_1230007 ID=Trimin1|352543|estExt_Genemark1.C_Ctg_1230007|Name=jgi.p|Trimin1|352543|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=303bp
MCRQTRRRAPPSLVLNLEAAIYQQCGVDSPPSSYEAAPRLVRRKPTSLSL
NIAVEEQHKDAFATEQAARILDWLAIAGEDITLDKDAMKAMGITHIINCT
RHCPNLFPDHSGQPVPTEGFHYLKLSLQDSIDQDITSALAPSFRMIEEAR
ACGGCCLVHCSSGMSRSATITIAYLVQHRNMTLLDAMHLTKDRRRQTSPN
PGFVSQLLDLEHVVHACHTLDLGKYCEDRFASTASWTPEVSSSSDDSSSS
SSEFAAGSSGDETASPRRPRCSSNAVRSSRHCSFFADEEEDGDLAAPARR
TA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020422	TYR_PHOSPHATASE_DUAL_dom
IPR000340	Dual-sp_phosphatase_cat-dom
IPR029021	Prot-tyrosine_phosphatase-like
IPR016130	Tyr_Pase_AS
IPR000387	Tyr_Pase_dom