Trimin1|347445|estExt_Genemark1.C_Ctg_120052 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347445
Unique NameTrimin1|347445|estExt_Genemark1.C_Ctg_120052
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length194
Homology
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: A0A835ZC26_9STRA (Putative 6-phospho-3-hexuloisomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC26_9STRA)

HSP 1 Score: 368 bits (944), Expect = 1.680e-128
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
Query:    1 MPDETDKYCSVLAEALKELQENVTAAQGAAVQLIEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPATCLPASFELALQLWFDVACVLLVDALGLSAEAATARHTNLE 193
            MPDETDKYCSVLAEALKELQENVTAAQGAAVQLIEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPATCLPASFELALQLWFDVACVLLVDALGLSAEAATARHTNLE
Sbjct:    1 MPDETDKYCSVLAEALKELQENVTAAQGAAVQLIEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPATCLPASFELALQLWFDVACVLLVDALGLSAEAATARHTNLE 193          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: A0A2P6TWK2_CHLSO (Fe-S cluster assembly n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TWK2_CHLSO)

HSP 1 Score: 149 bits (376), Expect = 7.110e-42
Identity = 102/227 (44.93%), Postives = 124/227 (54.63%), Query Frame = 0
Query:    7 KYCSVLAEALKELQENVTAAQGAAVQLIEEVKGA----KRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPATCLPA------------------------------------SFELALQLWFDVACVLLVDALGLSAEAATARHTNLE 193
            +Y  +L  A++ELQ NV AA+GAA  L+E +  A    +RI VYGVGREGLA+KGFAMRL+HMGLQ                  SVVG+MT + +G GDLL+ +AGPG F+TV AL   A  AGA  L +TSQP  AA   A  VL +PATC+ A                                    S+ELALQL+FD+ C  LV  L LS E   ARHTNLE
Sbjct:    6 QYTQLLDAAVQELQRNVGAAEGAAAALVERLVAAAGSHRRIAVYGVGREGLAMKGFAMRLYHMGLQ-----------------ASVVGDMTAARLGPGDLLLMSAGPGIFATVQALCGVATAAGATTLALTSQPGIAARLGASQVLHIPATCMAAEEAGDEATTAVAXXXXXXXXXXXAAAAPPSPLLLGSSYELALQLFFDLVCAQLVQRLQLSPEQLAARHTNLE 215          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: UPI0010C07FD1 (SIS domain-containing protein n=1 Tax=Rhizobium sp. FY34 TaxID=2562309 RepID=UPI0010C07FD1)

HSP 1 Score: 133 bits (335), Expect = 4.250e-36
Identity = 84/173 (48.55%), Postives = 108/173 (62.43%), Query Frame = 0
Query:   34 IEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPA-----------TCLPAS--FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 193
            + E+  A+RI +YGVGREGL IKG AMRL+H+GLQ                  SVVG+MT   + AGDLLI +AGPG FSTV+AL + AR AGARVL++T++P  AAA +ADV+L VPA           + LP    +E AL + F++  + L D LG+SAE   A HTNLE
Sbjct:   28 VREISEARRIALYGVGREGLQIKGLAMRLYHLGLQ-----------------ASVVGDMTTPPLDAGDLLIVSAGPGTFSTVSALMKVARMAGARVLLVTAEPQGAAAGLADVILPVPAQTMATDQGAASSVLPMGSLYEGALYILFELVILALRDELGVSAEIMRANHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: A0A1M3MM64_9HYPH (Fe-S cluster assembly protein HesB n=1 Tax=Rhizobiales bacterium 63-22 TaxID=1895812 RepID=A0A1M3MM64_9HYPH)

HSP 1 Score: 128 bits (321), Expect = 5.430e-34
Identity = 87/195 (44.62%), Postives = 112/195 (57.44%), Query Frame = 0
Query:   12 LAEALKELQENVTAAQGAAVQLIEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPA-----------TCLPAS--FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 193
            LA+  + L E+V        + ++++ GA RI +YGVGREGL IKGFAMRLFH+GL                 K +VVG+MT   +G GDLLI ++GPG FSTV AL   A+ AGAR L++T+QP AA A  AD VL +PA           + LP    FE A  + F+   + L D LG+S EA  A HTNLE
Sbjct:   12 LAKVFERLDEDVVQ------RAVDDIAGAGRIALYGVGREGLQIKGFAMRLFHLGL-----------------KAAVVGDMTTPPIGRGDLLILSSGPGSFSTVHALMGVAKEAGARTLVVTAQPDAADARAADTVLLLPAQTMANDRGESASILPMGSLFEGAQYILFEGMILKLRDKLGISTEAMRANHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: A0A2W4PML5_9PROT (6-phospho-3-hexuloisomerase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2W4PML5_9PROT)

HSP 1 Score: 126 bits (316), Expect = 3.070e-33
Identity = 81/173 (46.82%), Postives = 102/173 (58.96%), Query Frame = 0
Query:   34 IEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPA-----------TCLPAS--FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 193
            +E +  A+RI +YGVGREGL IKGFAMRLFH+G Q                  +VVG+MT   +G GDLLI +AGPG FSTV AL  EA+ AGA  L++T+QP   AA  AD+VL +PA           + LP    +E A  + F+V  + L D LG+S EA  A HTNLE
Sbjct:   28 VERIAAARRIALYGVGREGLQIKGFAMRLFHLGRQ-----------------AAVVGDMTTPPIGPGDLLIVSAGPGAFSTVLALMGEAKKAGASCLVVTAQPGGEAARQADMVLTIPAQTMADDRGPTTSVLPMGSLYEGAQYILFEVMILKLRDRLGISPEAMRANHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: A0A5B2W085_9HYPH (SIS domain-containing protein n=1 Tax=Salinarimonas soli TaxID=1638099 RepID=A0A5B2W085_9HYPH)

HSP 1 Score: 126 bits (316), Expect = 3.070e-33
Identity = 81/179 (45.25%), Postives = 104/179 (58.10%), Query Frame = 0
Query:   28 GAAVQLIEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPA-----------TCLPAS--FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 193
            GA  + + E+  A+RI +YGVGREGL +KGF MRLFH+G                    ++VG+MT  AVG GDLL+ +AGPG FSTV AL   AR AGAR L++T+QP   AA +AD VL VPA           + LP    +E A  + F++  + L D LG+S EA  A HTNLE
Sbjct:   22 GAVDRAVAEIAAARRIALYGVGREGLQMKGFCMRLFHLGRS-----------------AAMVGDMTTPAVGPGDLLVVSAGPGAFSTVLALMGVAREAGARTLVVTAQPGGEAARLADAVLPVPAQTMADDRGGAVSVLPMGSLYEGAQYVLFEIMILKLRDRLGVSPEAMRANHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: UPI000B4A563F (SIS domain-containing protein n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI000B4A563F)

HSP 1 Score: 126 bits (316), Expect = 3.070e-33
Identity = 80/173 (46.24%), Postives = 102/173 (58.96%), Query Frame = 0
Query:   34 IEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPA-----------TCLPAS--FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 193
            + E+  A RI +YGVGREGL IKG AMRLFH+GL                 K ++VG+MT   +G GDLLI +AGPGYFSTV AL   A   GAR L++T+QP  A A+ ADVVL +PA           + LP    +E A  + F+V  ++L D LG++ EA  A HTNLE
Sbjct:   28 VAEIAAANRIALYGVGREGLQIKGLAMRLFHLGL-----------------KAAMVGDMTTPHLGTGDLLIVSAGPGYFSTVDALMGVAARDGARTLLVTAQPDGACAKAADVVLPIPAQTMADDGGATVSVLPMGSLYEGAQYILFEVMILMLRDRLGITPEAMRANHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: UPI000DE9A305 (SIS domain-containing protein n=1 Tax=Cohaesibacter intestini TaxID=2211145 RepID=UPI000DE9A305)

HSP 1 Score: 126 bits (316), Expect = 3.070e-33
Identity = 80/175 (45.71%), Postives = 100/175 (57.14%), Query Frame = 0
Query:   32 QLIEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPATCLPASFEL-------------ALQLWFDVACVLLVDALGLSAEAATARHTNLE 193
            + +E V+ A RI +YGVGREGL IKGFAMRLFH+GL                 KVSVVG+MT   +G GDLLIA+AGPGYFSTVAAL   A+ AGA+ L IT+QP    A+ AD VL +PA  +    E+             A  + F+   + L   L +SA+     HTNLE
Sbjct:   26 EFVETVRSANRIALYGVGREGLQIKGFAMRLFHLGL-----------------KVSVVGDMTTPPLGTGDLLIASAGPGYFSTVAALINTAKQAGAKTLCITAQPDGVCAQTADQVLVIPAQTMADDMEVKTSTLPMGSLYEGAQYVVFECLLLKLKQILAISADDMRNNHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: A0A0K2DA34_9HYPH (Fe-S cluster assembly protein HesB n=3 Tax=Chelatococcus TaxID=28209 RepID=A0A0K2DA34_9HYPH)

HSP 1 Score: 125 bits (315), Expect = 4.340e-33
Identity = 84/173 (48.55%), Postives = 104/173 (60.12%), Query Frame = 0
Query:   34 IEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPATCL-----PAS--------FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 193
            +E +  A+RI +YGVGREGL IKGFAMRLFH+G         RA         +VVG+MT   +  GDLLI +AGPG FSTV AL  EAR AGA  L++T+QP   AA+ AD VL +PA  +     PAS        +E A  + F+V  + L D LG+SAEA  A HTNLE
Sbjct:   28 VERIAAARRIALYGVGREGLQIKGFAMRLFHLG---------RAA--------AVVGDMTTPPLAEGDLLIVSAGPGAFSTVLALMGEARKAGAACLLVTAQPGGEAAKQADTVLAIPAQTMADDRGPASSVLPMGSLYEGAQYILFEVMILKLKDKLGVSAEAMRANHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: UPI00062B3035 (SIS domain-containing protein n=1 Tax=Microvirga massiliensis TaxID=1033741 RepID=UPI00062B3035)

HSP 1 Score: 125 bits (313), Expect = 8.660e-33
Identity = 79/173 (45.66%), Postives = 103/173 (59.54%), Query Frame = 0
Query:   34 IEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPA-----------TCLPAS--FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 193
            ++E+  A ++ +YGVGREGL +KGFAMRLFH+G                  K SVVG+MT   +G GDLLI +AGPG+FSTV AL   A+ AGAR L++T+QP  A A  ADVVL VPA           + LP    FE A  + F+V  ++L   LG++ EA  + HTNLE
Sbjct:   28 VDEIAKADKVALYGVGREGLQVKGFAMRLFHLGR-----------------KASVVGDMTTPHLGRGDLLIVSAGPGHFSTVEALMGVAKRAGARTLVVTAQPDGACARAADVVLPVPAQTMADDSGSSVSVLPMGSLFEGAQYVLFEVMILMLRGRLGVTPEAMRSNHTNLE 183          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZC26_9STRA1.680e-128100.00Putative 6-phospho-3-hexuloisomerase n=1 Tax=Tribo... [more]
A0A2P6TWK2_CHLSO7.110e-4244.93Fe-S cluster assembly n=1 Tax=Chlorella sorokinian... [more]
UPI0010C07FD14.250e-3648.55SIS domain-containing protein n=1 Tax=Rhizobium sp... [more]
A0A1M3MM64_9HYPH5.430e-3444.62Fe-S cluster assembly protein HesB n=1 Tax=Rhizobi... [more]
A0A2W4PML5_9PROT3.070e-3346.826-phospho-3-hexuloisomerase n=2 Tax=Proteobacteria... [more]
A0A5B2W085_9HYPH3.070e-3345.25SIS domain-containing protein n=1 Tax=Salinarimona... [more]
UPI000B4A563F3.070e-3346.24SIS domain-containing protein n=1 Tax=Rhodomicrobi... [more]
UPI000DE9A3053.070e-3345.71SIS domain-containing protein n=1 Tax=Cohaesibacte... [more]
A0A0K2DA34_9HYPH4.340e-3348.55Fe-S cluster assembly protein HesB n=3 Tax=Chelato... [more]
UPI00062B30358.660e-3345.66SIS domain-containing protein n=1 Tax=Microvirga m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..36
NoneNo IPR availableGENE3D3.40.50.10490coord: 4..193
e-value: 1.0E-31
score: 111.8
IPR0175523-hexulose-6-phosphate isomerasePANTHERPTHR434433-HEXULOSE-6-PHOSPHATE ISOMERASEcoord: 84..153
coord: 8..79
IPR001347SIS domainPROSITEPS51464SIScoord: 33..180
score: 13.909395
IPR046348SIS domain superfamilySUPERFAMILY53697SIS domaincoord: 10..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:392884..394444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347445mRNA_3723Tribonema minus UTEX_B_3156 mRNAContig_12 392621..394444 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347445|estExt_Genemark1.C_Ctg_120052 ID=Trimin1|347445|estExt_Genemark1.C_Ctg_120052|Name=jgi.p|Trimin1|347445|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=194bp
MPDETDKYCSVLAEALKELQENVTAAQGAAVQLIEEVKGAKRICVYGVGR
EGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAG
DLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQV
PATCLPASFELALQLWFDVACVLLVDALGLSAEAATARHTNLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017552PHI/rmpB
IPR001347SIS_dom
IPR046348SIS_dom_sf