mRNA_3723 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347445
Unique NamemRNA_3723
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: A0A835ZC26_9STRA (Putative 6-phospho-3-hexuloisomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC26_9STRA)

HSP 1 Score: 369 bits (946), Expect = 2.590e-127
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1
Query:    1 MPDETDKYCSVLAEALKELQENVTAAQGAAVQLIEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPATCLPASFELALQLWFDVACVLLVDALGLSAEAATARHTNLE 579
            MPDETDKYCSVLAEALKELQENVTAAQGAAVQLIEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPATCLPASFELALQLWFDVACVLLVDALGLSAEAATARHTNLE
Sbjct:    1 MPDETDKYCSVLAEALKELQENVTAAQGAAVQLIEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPATCLPASFELALQLWFDVACVLLVDALGLSAEAATARHTNLE 193          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: A0A2P6TWK2_CHLSO (Fe-S cluster assembly n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TWK2_CHLSO)

HSP 1 Score: 150 bits (378), Expect = 5.710e-41
Identity = 102/227 (44.93%), Postives = 124/227 (54.63%), Query Frame = 1
Query:   19 KYCSVLAEALKELQENVTAAQGAAVQLIEEVKGA----KRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPATCLPA------------------------------------SFELALQLWFDVACVLLVDALGLSAEAATARHTNLE 579
            +Y  +L  A++ELQ NV AA+GAA  L+E +  A    +RI VYGVGREGLA+KGFAMRL+HMGLQ                  SVVG+MT + +G GDLL+ +AGPG F+TV AL   A  AGA  L +TSQP  AA   A  VL +PATC+ A                                    S+ELALQL+FD+ C  LV  L LS E   ARHTNLE
Sbjct:    6 QYTQLLDAAVQELQRNVGAAEGAAAALVERLVAAAGSHRRIAVYGVGREGLAMKGFAMRLYHMGLQ-----------------ASVVGDMTAARLGPGDLLLMSAGPGIFATVQALCGVATAAGATTLALTSQPGIAARLGASQVLHIPATCMAAEEAGDEATTAVAXXXXXXXXXXXAAAAPPSPLLLGSSYELALQLFFDLVCAQLVQRLQLSPEQLAARHTNLE 215          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: UPI0010C07FD1 (SIS domain-containing protein n=1 Tax=Rhizobium sp. FY34 TaxID=2562309 RepID=UPI0010C07FD1)

HSP 1 Score: 134 bits (337), Expect = 2.990e-35
Identity = 84/173 (48.55%), Postives = 108/173 (62.43%), Query Frame = 1
Query:  100 IEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPA-----------TCLPAS--FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 579
            + E+  A+RI +YGVGREGL IKG AMRL+H+GLQ                  SVVG+MT   + AGDLLI +AGPG FSTV+AL + AR AGARVL++T++P  AAA +ADV+L VPA           + LP    +E AL + F++  + L D LG+SAE   A HTNLE
Sbjct:   28 VREISEARRIALYGVGREGLQIKGLAMRLYHLGLQ-----------------ASVVGDMTTPPLDAGDLLIVSAGPGTFSTVSALMKVARMAGARVLLVTAEPQGAAAGLADVILPVPAQTMATDQGAASSVLPMGSLYEGALYILFELVILALRDELGVSAEIMRANHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: A0A1M3MM64_9HYPH (Fe-S cluster assembly protein HesB n=1 Tax=Rhizobiales bacterium 63-22 TaxID=1895812 RepID=A0A1M3MM64_9HYPH)

HSP 1 Score: 129 bits (323), Expect = 3.630e-33
Identity = 87/195 (44.62%), Postives = 112/195 (57.44%), Query Frame = 1
Query:   34 LAEALKELQENVTAAQGAAVQLIEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPA-----------TCLPAS--FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 579
            LA+  + L E+V        + ++++ GA RI +YGVGREGL IKGFAMRLFH+GL                 K +VVG+MT   +G GDLLI ++GPG FSTV AL   A+ AGAR L++T+QP AA A  AD VL +PA           + LP    FE A  + F+   + L D LG+S EA  A HTNLE
Sbjct:   12 LAKVFERLDEDVVQ------RAVDDIAGAGRIALYGVGREGLQIKGFAMRLFHLGL-----------------KAAVVGDMTTPPIGRGDLLILSSGPGSFSTVHALMGVAKEAGARTLVVTAQPDAADARAADTVLLLPAQTMANDRGESASILPMGSLFEGAQYILFEGMILKLRDKLGISTEAMRANHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: A0A2W4PML5_9PROT (6-phospho-3-hexuloisomerase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2W4PML5_9PROT)

HSP 1 Score: 127 bits (318), Expect = 2.010e-32
Identity = 81/173 (46.82%), Postives = 102/173 (58.96%), Query Frame = 1
Query:  100 IEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPA-----------TCLPAS--FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 579
            +E +  A+RI +YGVGREGL IKGFAMRLFH+G Q                  +VVG+MT   +G GDLLI +AGPG FSTV AL  EA+ AGA  L++T+QP   AA  AD+VL +PA           + LP    +E A  + F+V  + L D LG+S EA  A HTNLE
Sbjct:   28 VERIAAARRIALYGVGREGLQIKGFAMRLFHLGRQ-----------------AAVVGDMTTPPIGPGDLLIVSAGPGAFSTVLALMGEAKKAGASCLVVTAQPGGEAARQADMVLTIPAQTMADDRGPTTSVLPMGSLYEGAQYILFEVMILKLRDRLGISPEAMRANHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: A0A5B2W085_9HYPH (SIS domain-containing protein n=1 Tax=Salinarimonas soli TaxID=1638099 RepID=A0A5B2W085_9HYPH)

HSP 1 Score: 127 bits (318), Expect = 2.010e-32
Identity = 81/179 (45.25%), Postives = 104/179 (58.10%), Query Frame = 1
Query:   82 GAAVQLIEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPA-----------TCLPAS--FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 579
            GA  + + E+  A+RI +YGVGREGL +KGF MRLFH+G                    ++VG+MT  AVG GDLL+ +AGPG FSTV AL   AR AGAR L++T+QP   AA +AD VL VPA           + LP    +E A  + F++  + L D LG+S EA  A HTNLE
Sbjct:   22 GAVDRAVAEIAAARRIALYGVGREGLQMKGFCMRLFHLGRS-----------------AAMVGDMTTPAVGPGDLLVVSAGPGAFSTVLALMGVAREAGARTLVVTAQPGGEAARLADAVLPVPAQTMADDRGGAVSVLPMGSLYEGAQYVLFEIMILKLRDRLGVSPEAMRANHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: UPI000B4A563F (SIS domain-containing protein n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI000B4A563F)

HSP 1 Score: 127 bits (318), Expect = 2.010e-32
Identity = 80/173 (46.24%), Postives = 102/173 (58.96%), Query Frame = 1
Query:  100 IEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPA-----------TCLPAS--FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 579
            + E+  A RI +YGVGREGL IKG AMRLFH+GL                 K ++VG+MT   +G GDLLI +AGPGYFSTV AL   A   GAR L++T+QP  A A+ ADVVL +PA           + LP    +E A  + F+V  ++L D LG++ EA  A HTNLE
Sbjct:   28 VAEIAAANRIALYGVGREGLQIKGLAMRLFHLGL-----------------KAAMVGDMTTPHLGTGDLLIVSAGPGYFSTVDALMGVAARDGARTLLVTAQPDGACAKAADVVLPIPAQTMADDGGATVSVLPMGSLYEGAQYILFEVMILMLRDRLGITPEAMRANHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: UPI000DE9A305 (SIS domain-containing protein n=1 Tax=Cohaesibacter intestini TaxID=2211145 RepID=UPI000DE9A305)

HSP 1 Score: 127 bits (318), Expect = 2.010e-32
Identity = 80/175 (45.71%), Postives = 100/175 (57.14%), Query Frame = 1
Query:   94 QLIEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPATCLPASFEL-------------ALQLWFDVACVLLVDALGLSAEAATARHTNLE 579
            + +E V+ A RI +YGVGREGL IKGFAMRLFH+GL                 KVSVVG+MT   +G GDLLIA+AGPGYFSTVAAL   A+ AGA+ L IT+QP    A+ AD VL +PA  +    E+             A  + F+   + L   L +SA+     HTNLE
Sbjct:   26 EFVETVRSANRIALYGVGREGLQIKGFAMRLFHLGL-----------------KVSVVGDMTTPPLGTGDLLIASAGPGYFSTVAALINTAKQAGAKTLCITAQPDGVCAQTADQVLVIPAQTMADDMEVKTSTLPMGSLYEGAQYVVFECLLLKLKQILAISADDMRNNHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: A0A0K2DA34_9HYPH (Fe-S cluster assembly protein HesB n=3 Tax=Chelatococcus TaxID=28209 RepID=A0A0K2DA34_9HYPH)

HSP 1 Score: 126 bits (317), Expect = 2.830e-32
Identity = 84/173 (48.55%), Postives = 104/173 (60.12%), Query Frame = 1
Query:  100 IEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPATCL-----PAS--------FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 579
            +E +  A+RI +YGVGREGL IKGFAMRLFH+G         RA         +VVG+MT   +  GDLLI +AGPG FSTV AL  EAR AGA  L++T+QP   AA+ AD VL +PA  +     PAS        +E A  + F+V  + L D LG+SAEA  A HTNLE
Sbjct:   28 VERIAAARRIALYGVGREGLQIKGFAMRLFHLG---------RAA--------AVVGDMTTPPLAEGDLLIVSAGPGAFSTVLALMGEARKAGAACLLVTAQPGGEAAKQADTVLAIPAQTMADDRGPASSVLPMGSLYEGAQYILFEVMILKLKDKLGVSAEAMRANHTNLE 183          
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Match: UPI00062B3035 (SIS domain-containing protein n=1 Tax=Microvirga massiliensis TaxID=1033741 RepID=UPI00062B3035)

HSP 1 Score: 125 bits (315), Expect = 5.600e-32
Identity = 79/173 (45.66%), Postives = 103/173 (59.54%), Query Frame = 1
Query:  100 IEEVKGAKRICVYGVGREGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAGDLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQVPA-----------TCLPAS--FELALQLWFDVACVLLVDALGLSAEAATARHTNLE 579
            ++E+  A ++ +YGVGREGL +KGFAMRLFH+G                  K SVVG+MT   +G GDLLI +AGPG+FSTV AL   A+ AGAR L++T+QP  A A  ADVVL VPA           + LP    FE A  + F+V  ++L   LG++ EA  + HTNLE
Sbjct:   28 VDEIAKADKVALYGVGREGLQVKGFAMRLFHLGR-----------------KASVVGDMTTPHLGRGDLLIVSAGPGHFSTVEALMGVAKRAGARTLVVTAQPDGACARAADVVLPVPAQTMADDSGSSVSVLPMGSLFEGAQYVLFEVMILMLRGRLGVTPEAMRSNHTNLE 183          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347445 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZC26_9STRA2.590e-127100.00Putative 6-phospho-3-hexuloisomerase n=1 Tax=Tribo... [more]
A0A2P6TWK2_CHLSO5.710e-4144.93Fe-S cluster assembly n=1 Tax=Chlorella sorokinian... [more]
UPI0010C07FD12.990e-3548.55SIS domain-containing protein n=1 Tax=Rhizobium sp... [more]
A0A1M3MM64_9HYPH3.630e-3344.62Fe-S cluster assembly protein HesB n=1 Tax=Rhizobi... [more]
A0A2W4PML5_9PROT2.010e-3246.826-phospho-3-hexuloisomerase n=2 Tax=Proteobacteria... [more]
A0A5B2W085_9HYPH2.010e-3245.25SIS domain-containing protein n=1 Tax=Salinarimona... [more]
UPI000B4A563F2.010e-3246.24SIS domain-containing protein n=1 Tax=Rhodomicrobi... [more]
UPI000DE9A3052.010e-3245.71SIS domain-containing protein n=1 Tax=Cohaesibacte... [more]
A0A0K2DA34_9HYPH2.830e-3248.55Fe-S cluster assembly protein HesB n=3 Tax=Chelato... [more]
UPI00062B30355.600e-3245.66SIS domain-containing protein n=1 Tax=Microvirga m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:392621..394444 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347445|estExt_Genemark1.C_Ctg_120052
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC00377
KEGG ReactionR05339,R09780
KEGG ModuleM00345,M00580
KEGG Pathwayko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230
KEGG koko:K08094
EC5.3.1.27
Descriptionsugar phosphate isomerase involved in capsule formation
COG categoryM
Max annot lvl28211|Alphaproteobacteria
EggNOG OGsCOG0794@1|root,COG0794@2|Bacteria,1RAT6@1224|Proteobacteria,2U5BQ@28211|Alphaproteobacteria
Evalue7.11e-34
Seed ortholog1211115.ALIQ01000218_gene1460
Hectar predicted targeting categoryother localisation
TranscriptId347767
TrackFilteredModels1
ProteinId347445
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347445gene_3723Tribonema minus UTEX_B_3156 geneContig_12 392621..394444 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347445Trimin1|347445|estExt_Genemark1.C_Ctg_120052Tribonema minus UTEX_B_3156 polypeptideContig_12 392884..394444 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3723_4exon_3723_4Tribonema minus UTEX_B_3156 exonContig_12 392621..392995 -
exon_3723_3exon_3723_3Tribonema minus UTEX_B_3156 exonContig_12 393076..393290 -
exon_3723_2exon_3723_2Tribonema minus UTEX_B_3156 exonContig_12 393448..393498 -
exon_3723_1exon_3723_1Tribonema minus UTEX_B_3156 exonContig_12 394241..394444 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_3723UTR3_3723Tribonema minus UTEX_B_3156 three_prime_UTRContig_12 392621..392883 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3723CDS_3723Tribonema minus UTEX_B_3156 CDSContig_12 394241..394444 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3723 ID=mRNA_3723|Name=jgi.p|Trimin1|347445|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=845bp|location=Sequence derived from alignment at Contig_12:392621..394444- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCAGACGAGACAGACAAGTACTGCTCCGTGCTGGCAGAAGCGCTGAA
GGAGCTGCAGGAAAATGTGACGGCTGCTCAAGGGGCGGCTGTGCAGTTGA
TCGAGGAGGTGAAAGGTGCCAAACGGATCTGCGTCTACGGAGTTGGCAGA
GAAGGACTTGCCATCAAGGGATTCGCCATGAGGCTGTTTCATATGGGTCT
GCAGCACTACACGTGTGCCAGTCACAGGGCGACGCCCTTGCAGCTGCCCG
GCAAGGTGTCCGTGGTGGGCGAGATGACGTGCAGCGCCGTCGGCGCCGGT
GACCTCCTCATCGCGACCGCGGGCCCGGGCTACTTCAGCACCGTCGCGGC
GCTGAGCCGCGAGGCGCGCCACGCCGGCGCGCGCGTTCTCATCATCACAT
CTCAACCCCCAGCGGCGGCGGCGGAGATTGCGGATGTCGTGCTGCAGGTT
CCGGCGACGTGCCTGCCGGCCAGCTTCGAGCTCGCGCTGCAGCTGTGGTT
TGACGTCGCGTGCGTGCTGCTGGTGGACGCGCTGGGGCTGAGCGCTGAGG
CGGCGACGGCGCGGCACACGAACCTCGAGTGATGGTGATGGTGATGTCGC
CTTCGCGGCGGGTGCTAGCGGCTGCGAACGGGGCAAGCTGCGCAGCAGCG
GGCGGCAGGTGGTGCACATGCGCATTTGAGGTGGCGCTGCTCCACTGAAC
CGACAGGGTCAGCCTGATCGTCCCAGTGACAAGCAGGGTGGTTCGCCAAG
TGCGAGCAGCTACCAAGCTACAGCTCACTTTAGCATGCAGGCATGTGGTG
TCGCATTATGGCTTGGGGCAGTGAAGGAAGATGGACTGCCGGGCA
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protein sequence of jgi.p|Trimin1|347445

>Trimin1|347445|estExt_Genemark1.C_Ctg_120052 ID=Trimin1|347445|estExt_Genemark1.C_Ctg_120052|Name=jgi.p|Trimin1|347445|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=194bp
MPDETDKYCSVLAEALKELQENVTAAQGAAVQLIEEVKGAKRICVYGVGR
EGLAIKGFAMRLFHMGLQHYTCASHRATPLQLPGKVSVVGEMTCSAVGAG
DLLIATAGPGYFSTVAALSREARHAGARVLIITSQPPAAAAEIADVVLQV
PATCLPASFELALQLWFDVACVLLVDALGLSAEAATARHTNLE*
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mRNA from alignment at Contig_12:392621..394444-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3723 ID=mRNA_3723|Name=jgi.p|Trimin1|347445|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1824bp|location=Sequence derived from alignment at Contig_12:392621..394444- (Tribonema minus UTEX_B_3156 )
ATGCCAGACGAGACAGACAAGTACTGCTCCGTGCTGGCAGAAGCGCTGAA GGAGCTGCAGGAAAATGTGACGGCTGCTCAAGGGGCGGCTGTGCAGTTGA TCGAGGAGGTGAAAGGTGCCAAACGGATCTGCGTCTACGGAGTTGGCAGA GAAGGACTTGCCATCAAGGGATTCGCCATGAGGCTGTTTCATATGGGTCT GCAGGTCGGTGCTCGATTCGCAAGGAGGGTGACCCCGAGCTGTCTGCAAG CATGTGTTTGTGTTGTACAGAATCACTGTACTGAGTTTTCATGTACAAAG TGTGAACACCGCCTCCCTTGGTGCACAACATCTAGACTGGAGATACAGCA GACTGAGCGTAAGAATTTCATCAGCGGGCGCCGGAGTGACTGACCGCGCT CCAGCCCGTCATGATTGGAGAAAAGGGCGCCACTATGGCGCTGATGGCTG CAGATGGCTGAAGCAAACCATGCACAAAGGACATGAGAGCATGATAGCGC TTCAGTGCTTGGCAATAACCGCGTCACCAGACGCTGGTGCTCTGATGGCC ACAAAGGCTCGGTATAAGTCTGCATGTCTTCGGATATTGCTAGCAGCAGT TCTCTACGTAATCAGCGCTACCTAGCAAATCGATAGCGGCTTTTCTGATC TGATGCACATACCTACAATAAGCAGCAGTGCACAAAGTTATGTGCCACCC CATGATTGCCTGCCACCTGCGCTTGCGCATACGAGATAATCTTGAACTAA ACGCTGCCATAACCACCGCATCCTGTTTGAACGAGCGAGCTCAATGTTGT TGTGCACGTGTCGTTGCATGCTTTAATGACATGCGCTGGAGACTCTCTCT CATGCGTGGAACTTCAACTGTGACGCCCCTTCAGCTGCCTTGCAATGAGA ATGAGTGGGATCTGCACTGTTGGCGGCCTCTGATTCTGATGCACAGCACT ACACGTGTGCCAGTCACAGGGCGACGCCCTTGCAGCTGCCCGGCAAGGTG GGTGACAATATGCCCCCTCAGCATCACCAACTTCAATGCCACAGCCAGCT CCGTCCCCTGCGATCGTTCCGCAATGAGAAGCAAACGTCATCACCTCCCG CCCCGCGTCGTCACACTCGAAACCTCAACTGTGACGCTCCCCGCATGCGC ACAGGTGTCCGTGGTGGGCGAGATGACGTGCAGCGCCGTCGGCGCCGGTG ACCTCCTCATCGCGACCGCGGGCCCGGGCTACTTCAGCACCGTCGCGGCG CTGAGCCGCGAGGCGCGCCACGCCGGCGCGCGCGTTCTCATCATCACATC TCAACCCCCAGCGGCGGCGGCGGAGATTGCGGATGTCGTGCTGCAGGTTC CGGCGACGTGCCTGCCGGCGTCGGAGACGGGCGGGGGGGGAGGGGGGCAT GGTGGTGGTGGGGGGGGGGGGAGGGGGGGAGCGCGCTGCTCATGGGCAGC AGCTTCGAGCTCGCGCTGCAGCTGTGGTTTGACGTCGCGTGCGTGCTGCT GGTGGACGCGCTGGGGCTGAGCGCTGAGGCGGCGACGGCGCGGCACACGA ACCTCGAGTGATGGTGATGGTGATGTCGCCTTCGCGGCGGGTGCTAGCGG CTGCGAACGGGGCAAGCTGCGCAGCAGCGGGCGGCAGGTGGTGCACATGC GCATTTGAGGTGGCGCTGCTCCACTGAACCGACAGGGTCAGCCTGATCGT CCCAGTGACAAGCAGGGTGGTTCGCCAAGTGCGAGCAGCTACCAAGCTAC AGCTCACTTTAGCATGCAGGCATGTGGTGTCGCATTATGGCTTGGGGCAG TGAAGGAAGATGGACTGCCGGGCA
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Coding sequence (CDS) from alignment at Contig_12:392621..394444-

>mRNA_3723 ID=mRNA_3723|Name=jgi.p|Trimin1|347445|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=582bp|location=Sequence derived from alignment at Contig_12:392621..394444- (Tribonema minus UTEX_B_3156 )
ATGCCAGACGAGACAGACAAGTACTGCTCCGTGCTGGCAGAAGCGCTGAA
GGAGCTGCAGGAAAATGTGACGGCTGCTCAAGGGGCGGCTGTGCAGTTGA
TCGAGGAGGTGAAAGGTGCCAAACGGATCTGCGTCTACGGAGTTGGCAGA
GAAGGACTTGCCATCAAGGGATTCGCCATGAGGCTGTTTCATATGGGTCT
GCAGCACTACACGTGTGCCAGTCACAGGGCGACGCCCTTGCAGCTGCCCG
GCAAGGTGTCCGTGGTGGGCGAGATGACGTGCAGCGCCGTCGGCGCCGGT
GACCTCCTCATCGCGACCGCGGGCCCGGGCTACTTCAGCACCGTCGCGGC
GCTGAGCCGCGAGGCGCGCCACGCCGGCGCGCGCGTTCTCATCATCACAT
CTCAACCCCCAGCGGCGGCGGCGGAGATTGCGGATGTCGTGCTGCAGGTT
CCGGCGACGTGCCTGCCGGCCAGCTTCGAGCTCGCGCTGCAGCTGTGGTT
TGACGTCGCGTGCGTGCTGCTGGTGGACGCGCTGGGGCTGAGCGCTGAGG
CGGCGACGGCGCGGCACACGAACCTCGAGTGA
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