Trimin1|347444|estExt_Genemark1.C_Ctg_120051 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347444
Unique NameTrimin1|347444|estExt_Genemark1.C_Ctg_120051
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length285
Homology
BLAST of jgi.p|Trimin1|347444 vs. uniprot
Match: A0A835ZGQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGQ5_9STRA)

HSP 1 Score: 504 bits (1298), Expect = 1.940e-179
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
Query:    1 MHVKAGVAAALSSLLLARHAEGFQLPTLHRQQPRHSTRSGSMPHMGLQAPLGGITIAAGAEIILAAYSGHLPCAAARATSKGVAAGAASLALSLFFKEFVDTGAGGVAVGAANFLTIVMLLVRVVTIRPDARYVHFPASMRRCASFXXXXXXXXXXXXXXXXXXXXXIAHPSGCTRVAPTKTNVSDLGMPKFKSSPAEVQEVAREWLALQPRTKIFRDEPGYVHAQALSFLFGFPDNLGIRFEETPGGGTQVWAQGELRVGEGDLGVNYKRVKALLLYLQANCT 284
            MHVKAGVAAALSSLLLARHAEGFQLPTLHRQQPRHSTRSGSMPHMGLQAPLGGITIAAGAEIILAAYSGHLPCAAARATSKGVAAGAASLALSLFFKEFVDTGAGGVAVGAANFLTIVMLLVRVVTIRPDARYVHFPASMRRCASFXXXXXXXXXXXXXXXXXXXXXIAHPSGCTRVAPTKTNVSDLGMPKFKSSPAEVQEVAREWLALQPRTKIFRDEPGYVHAQALSFLFGFPDNLGIRFEETPGGGTQVWAQGELRVGEGDLGVNYKRVKALLLYLQANCT
Sbjct:    1 MHVKAGVAAALSSLLLARHAEGFQLPTLHRQQPRHSTRSGSMPHMGLQAPLGGITIAAGAEIILAAYSGHLPCAAARATSKGVAAGAASLALSLFFKEFVDTGAGGVAVGAANFLTIVMLLVRVVTIRPDARYVHFPASMRRCASFXXXXXXXXXXXXXXXXXXXXXIAHPSGCTRVAPTKTNVSDLGMPKFKSSPAEVQEVAREWLALQPRTKIFRDEPGYVHAQALSFLFGFPDNLGIRFEETPGGGTQVWAQGELRVGEGDLGVNYKRVKALLLYLQANCT 284          
BLAST of jgi.p|Trimin1|347444 vs. uniprot
Match: A0A6V1NVD6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NVD6_HETAK)

HSP 1 Score: 118 bits (295), Expect = 6.990e-28
Identity = 92/241 (38.17%), Postives = 114/241 (47.30%), Query Frame = 0
Query:   54 ITIAAGAEIILAAYSGHLPCAAARATSKGVAAGAASLALSLFFKEFVDTG----AGGVAVGAANFLTIVMLL-VRVVTIRPDARYVH-FPASMRRCASFXXXXXXXXXXXXXXXXXXXXXIAHPSGCTRVA------PTKTNVSDLGMPKFKSSPAEVQEVAREWLALQPRTKIFRDEPGYVHAQALSFLFGFPDNLGIRFEETPGGGTQVWAQGELRVGEGDLGVNYKRVKALLLYLQAN 282
            + IA+  E  LA  +GH P         GV  G  SLA S   K              AVG    + +V LL VR+ T+ PD RY   FPA                             +A P GCTRVA      P   N+    +P    S  +VQ+  + W+  QPR  I  ++ GY+HAQ LS L GFPDNLG+R      G T+VWAQGELRVG+GDLGVNY RVK LL ++  N
Sbjct:   73 VPIASALEAGLAVVAGHAP---------GVVVGLVSLAWSTVLKNKDAVRRLLPVSPEAVGTPLSVWVVALLGVRLATLAPDPRYAGAFPAD----------------------------VAAPIGCTRVAGDFGRWPGGGNLRPAVVPGL--SVDQVQQRIKGWILEQPRATILEEKEGYIHAQVLSNLMGFPDNLGVRVFRNAAGRTEVWAQGELRVGQGDLGVNYARVKKLLEFIDEN 274          
BLAST of jgi.p|Trimin1|347444 vs. uniprot
Match: A0A3M1U0C2_9EURY (DUF1499 domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A3M1U0C2_9EURY)

HSP 1 Score: 79.7 bits (195), Expect = 1.210e-14
Identity = 41/108 (37.96%), Postives = 63/108 (58.33%), Query Frame = 0
Query:  174 CTRVAPTKTNVSDLGMPKFKSSPAEVQEVAREWLALQPRTKIFRDEPGYVHAQALSFLFGFPDNLGIRFEETPGGGTQVWAQGELRVGEGDLGVNYKRVKALLLYLQA 281
            CTRVA        L   K  ++  EV +    W+ +QPRT+I RD   ++HA+ LSF+F FPD+L ++     G  T  W Q + R+G GDL VN +RV++L  ++++
Sbjct:   46 CTRVAEFNVRGEGLRPLKLNATLREVHDAILNWIDVQPRTEILRDNGTFIHAKFLSFVFRFPDDLYVQLF-CVGNQTSFWVQSQSRLGRGDLNVNEERVQSLFSFIES 152          
BLAST of jgi.p|Trimin1|347444 vs. uniprot
Match: A0A0D2M186_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2M186_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 2.920e-7
Identity = 53/182 (29.12%), Postives = 76/182 (41.76%), Query Frame = 0
Query:  111 AANFLTIVMLLVRVVTIRPDARYVHFPASMRRCASFXXXXXXXXXXXXXXXXXXXXXIAHPSGCTRVAPTKTNVSDLGMP-KFKSSPAEVQEVAREWLALQPRTKIFRDEPG----------YVHAQALSFLFGFPDNLGIRFEETPGGGTQVWAQGELRVGEGDLGVNYKRVKALLLYLQA 281
            A   L +++LLVR  +  P A    FP    RC                             GC RVA    + +   +P K +++    +  A  W+   PR ++  D              VHA+ L+F +GF D+  +R      G   V AQG+LR+G GDLGVN  R +ALL  L+A
Sbjct:    6 ALGALVMLLLLVRAASPDPKATAAAFP---ERCTKL-------------------------EGCGRVAERHPHRAGPEVPLKLRTTLEGARGAAAAWVRALPRAEVLYDAADGGADGGGRALLVHARVLTFFWGFADDFWVRLSCAGDGAALVEAQGQLRLGVGDLGVNPARNQALLGALRA 159          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347444 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835ZGQ5_9STRA1.940e-179100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1NVD6_HETAK6.990e-2838.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3M1U0C2_9EURY1.210e-1437.96DUF1499 domain-containing protein n=1 Tax=Euryarch... [more]
A0A0D2M186_9CHLO2.920e-729.12Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010865Protein of unknown function DUF1499PFAMPF07386DUF1499coord: 193..277
e-value: 6.7E-12
score: 45.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:388539..392186 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347444mRNA_3722Tribonema minus UTEX_B_3156 mRNAContig_12 388539..392383 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347444|estExt_Genemark1.C_Ctg_120051 ID=Trimin1|347444|estExt_Genemark1.C_Ctg_120051|Name=jgi.p|Trimin1|347444|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=285bp
MHVKAGVAAALSSLLLARHAEGFQLPTLHRQQPRHSTRSGSMPHMGLQAP
LGGITIAAGAEIILAAYSGHLPCAAARATSKGVAAGAASLALSLFFKEFV
DTGAGGVAVGAANFLTIVMLLVRVVTIRPDARYVHFPASMRRCASFMLLA
RVVTIRPDARYVHFPASIAHPSGCTRVAPTKTNVSDLGMPKFKSSPAEVQ
EVAREWLALQPRTKIFRDEPGYVHAQALSFLFGFPDNLGIRFEETPGGGT
QVWAQGELRVGEGDLGVNYKRVKALLLYLQANCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010865DUF1499