Trimin1|347435|estExt_Genemark1.C_Ctg_120031 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347435
Unique NameTrimin1|347435|estExt_Genemark1.C_Ctg_120031
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length79
Homology
BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A835ZAT5_9STRA (DSS1/SEM1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT5_9STRA)

HSP 1 Score: 145 bits (367), Expect = 3.330e-44
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query:    1 MVKEPTSTMADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNATTAA 78
            MVKEPTSTMADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNATTAA
Sbjct:    1 MVKEPTSTMADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNATTAA 78          
BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A7S2CP29_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP29_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.830e-14
Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 0
Query:   10 ADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQEL 70
            A++K + P +E LEEDDEFEEF E+NW  + ED  DAAQW+EDWDD  LD+DF +QLR EL
Sbjct:   18 AEEKPEAPKLEVLEEDDEFEEFAEKNWDKSAEDGEDAAQWEEDWDDGELDDDFTNQLRAEL 78          
BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A485KQ20_9STRA (Aste57867_10332 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485KQ20_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.800e-12
Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 0
Query:   18 VVEGLEEDDEFEEFEEENWSAAQEDTADAA--QWQEDWDDDALDEDFCSQLRQELQQNA 74
            V+  +EEDDEFEEFEE +W AAQE+       QWQ+DWD D  D+DFC+QLRQEL +NA
Sbjct:   23 VIHVVEEDDEFEEFEEHSWGAAQEEKESQIKRQWQDDWDVDEADDDFCNQLRQELSKNA 81          
BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A6B2LYR9_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LYR9_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 1.550e-11
Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    4 EPTSTMADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQEL 70
            EPT+    K+E     EGLEEDDEFEEFE+ +W   QED  DA  W++DWDD+ +++DF +QLRQEL
Sbjct:    3 EPTNNTPKKEE----FEGLEEDDEFEEFED-DWVETQEDKTDATLWEDDWDDEDIEDDFSAQLRQEL 64          
BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A7S1ZHX0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZHX0_TRICV)

HSP 1 Score: 63.9 bits (154), Expect = 1.660e-11
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   17 PVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNA 74
            P+ E +EEDDEFEEFE   W A  ED  DA QWQ++WDDD +++DF   LR EL +N+
Sbjct:   38 PITEAIEEDDEFEEFEPCRWDAHDEDAEDAQQWQDNWDDDDIEDDFTKNLRAELTKNS 95          
BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A067CXL5_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CXL5_SAPPC)

HSP 1 Score: 63.2 bits (152), Expect = 2.140e-11
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    9 MADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTAD--AAQWQEDWDDDALDEDFCSQLRQELQQNA 74
            MA   E   ++  +EEDDEFEEFEE+NW A  E+       QWQ+DWD D  D+DFC+QLR+EL++NA
Sbjct:   15 MAASSEPKKMIHVVEEDDEFEEFEEKNWGAKMEEKESHIKLQWQDDWDVDQADDDFCNQLRRELEKNA 82          
BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A1W0A6I1_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6I1_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 5.800e-11
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 0
Query:   18 VVEGLEEDDEFEEFEEENWSAAQEDTAD--AAQWQEDWDDDALDEDFCSQLRQELQQNA 74
            V+  +EEDDEFEEFEE++W A  E+       QWQ+DWD D  D+DFC+QLR+EL++NA
Sbjct:   22 VIHVVEEDDEFEEFEEQSWGAQMEEKESHIKLQWQDDWDVDQADDDFCNQLRRELEKNA 80          
BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A7S2UJI1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJI1_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 7.040e-11
Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 0
Query:   17 PVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNAT 75
            P+ E +EEDD+FEEFE   W+A  ED  DA QWQ++WDDD +++DF   LR EL+ +++
Sbjct:   57 PIAEAIEEDDDFEEFEPCQWAAVDEDAEDAQQWQDNWDDDDIEDDFTKSLRAELEASSS 115          
BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A5B8N1F7_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8N1F7_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 1.030e-10
Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 0
Query:   11 DKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQ 71
            DK ++V     +EEDD+FEEFE + W+ A+ED ADA +W+ DWDDD + +DF  QLR EL+
Sbjct:    7 DKYQEVVKQVAIEEDDDFEEFETQEWNEAEEDLADAERWENDWDDDDVTDDFAKQLRTELE 67          
BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: UPI001B88DD9E (26S proteasome complex subunit SEM1-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DD9E)

HSP 1 Score: 60.8 bits (146), Expect = 1.540e-10
Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    9 MADK-KEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNATT 76
            MAD+ K++ P +  LEEDDEFEEF  E+W+ A+ED  D   W+++WDDD +++DF  QLR EL++  TT
Sbjct:    1 MADQQKDKKPDLGLLEEDDEFEEFPAEDWTGAEEDADDDKVWEDNWDDDNIEDDFSKQLRAELEKKRTT 69          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347435 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZAT5_9STRA3.330e-44100.00DSS1/SEM1 family-domain-containing protein n=1 Tax... [more]
A0A7S2CP29_9STRA1.830e-1462.30Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A485KQ20_9STRA1.800e-1261.02Aste57867_10332 protein n=4 Tax=Aphanomyces TaxID=... [more]
A0A6B2LYR9_9EUKA1.550e-1155.22Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A7S1ZHX0_TRICV1.660e-1155.17Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A067CXL5_SAPPC2.140e-1152.94Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A1W0A6I1_9STRA5.800e-1155.93Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S2UJI1_9STRA7.040e-1150.85Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A5B8N1F7_9CHLO1.030e-1052.46Uncharacterized protein n=1 Tax=Chloropicon primus... [more]
UPI001B88DD9E1.540e-1050.7226S proteasome complex subunit SEM1-like n=1 Tax=G... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007834DSS1/SEM1SMARTSM01385DSS1_SEM1_2coord: 12..72
e-value: 3.3E-19
score: 79.8
IPR007834DSS1/SEM1PFAMPF05160DSS1_SEM1coord: 16..72
e-value: 8.9E-18
score: 64.1
IPR007834DSS1/SEM1PANTHERPTHR1677126 PROTEASOME COMPLEX SUBUNIT DSS1coord: 6..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..64
NoneNo IPR availablePANTHERPTHR16771:SF026S PROTEASOME COMPLEX SUBUNIT SEM1coord: 6..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:237555..239037 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347435mRNA_3703Tribonema minus UTEX_B_3156 mRNAContig_12 237365..239152 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347435|estExt_Genemark1.C_Ctg_120031 ID=Trimin1|347435|estExt_Genemark1.C_Ctg_120031|Name=jgi.p|Trimin1|347435|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=79bp
MVKEPTSTMADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQ
EDWDDDALDEDFCSQLRQELQQNATTAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007834DSS1_SEM1