mRNA_3703 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|347435
Unique Name	mRNA_3703
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A835ZAT5_9STRA (DSS1/SEM1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT5_9STRA)

HSP 1 Score: 147 bits (370), Expect = 5.690e-43
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 2

Query:  116 MVKEPTSTMADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNATTAA 349
            MVKEPTSTMADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNATTAA
Sbjct:    1 MVKEPTSTMADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNATTAA 78

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A7S2CP29_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP29_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.240e-13
Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 2

Query:  143 ADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNATT 343
            A++K + P +E LEEDDEFEEF E+NW  + ED  DAAQW+EDWDD  LD+DF +QLR EL    +T
Sbjct:   18 AEEKPEAPKLEVLEEDDEFEEFAEKNWDKSAEDGEDAAQWEEDWDDGELDDDFTNQLRAELTAPGST 84

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A485KQ20_9STRA (Aste57867_10332 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485KQ20_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.960e-11
Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 2

Query:  167 VVEGLEEDDEFEEFEEENWSAAQEDTADAA--QWQEDWDDDALDEDFCSQLRQELQQNA 337
            V+  +EEDDEFEEFEE +W AAQE+       QWQ+DWD D  D+DFC+QLRQEL +NA
Sbjct:   23 VIHVVEEDDEFEEFEEHSWGAAQEEKESQIKRQWQDDWDVDEADDDFCNQLRQELSKNA 81

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A6B2LYR9_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LYR9_9EUKA)

HSP 1 Score: 63.9 bits (154), Expect = 1.580e-10
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 2

Query:  125 EPTSTMADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNAT 340
            EPT+    K+E     EGLEEDDEFEEFE+ +W   QED  DA  W++DWDD+ +++DF +QLRQEL +  T
Sbjct:    3 EPTNNTPKKEE----FEGLEEDDEFEEFED-DWVETQEDKTDATLWEDDWDDEDIEDDFSAQLRQELTKVQT 69

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A7S1ZHX0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZHX0_TRICV)

HSP 1 Score: 64.7 bits (156), Expect = 1.740e-10
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 2

Query:  164 PVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNA 337
            P+ E +EEDDEFEEFE   W A  ED  DA QWQ++WDDD +++DF   LR EL +N+
Sbjct:   38 PITEAIEEDDEFEEFEPCRWDAHDEDAEDAQQWQDNWDDDDIEDDFTKNLRAELTKNS 95

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A067CXL5_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CXL5_SAPPC)

HSP 1 Score: 63.9 bits (154), Expect = 2.180e-10
Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 2

Query:  128 PTSTMADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTAD--AAQWQEDWDDDALDEDFCSQLRQELQQNA 337
            P +  ++ K+ + VVE   EDDEFEEFEE+NW A  E+       QWQ+DWD D  D+DFC+QLR+EL++NA
Sbjct:   14 PMAASSEPKKMIHVVE---EDDEFEEFEEKNWGAKMEEKESHIKLQWQDDWDVDQADDDFCNQLRRELEKNA 82

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A7S2UJI1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJI1_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.620e-10
Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = 2

Query:  107 EDTMVKEPTSTMADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQNAT 340
            +D M  +   T  ++    P+ E +EEDD+FEEFE   W+A  ED  DA QWQ++WDDD +++DF   LR EL+ +++
Sbjct:   38 QDMMSNKKEETKKEETPAAPIAEAIEEDDDFEEFEPCQWAAVDEDAEDAQQWQDNWDDDDIEDDFTKSLRAELEASSS 115

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A1W0A6I1_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6I1_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 5.760e-10
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 2

Query:  167 VVEGLEEDDEFEEFEEENWSAAQEDTAD--AAQWQEDWDDDALDEDFCSQLRQELQQNA 337
            V+  +EEDDEFEEFEE++W A  E+       QWQ+DWD D  D+DFC+QLR+EL++NA
Sbjct:   22 VIHVVEEDDEFEEFEEQSWGAQMEEKESHIKLQWQDDWDVDQADDDFCNQLRRELEKNA 80

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A3M6TLK3_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TLK3_POCDA)

HSP 1 Score: 61.6 bits (148), Expect = 1.630e-9
Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 2

Query:  179 LEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQN 334
            LEEDDEFEEF  E W+A  ED AD   W+++WDDD +++DF +QLR EL++N
Sbjct:   18 LEEDDEFEEFPAEEWTAVDEDQADIHVWEDNWDDDTVEDDFSNQLRAELEKN 69

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A1Y1IFJ8_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFJ8_KLENI)

HSP 1 Score: 60.8 bits (146), Expect = 3.560e-9
Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 2

Query:  164 PVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQEDWDDDALDEDFCSQLRQELQQ 331
            P V+  E+DDEFEEFE E+W+A +EDT    QW++DWDDD + +DF   LR EL++
Sbjct:   24 PKVDVFEDDDEFEEFENEDWNAEEEDTTAVHQWEDDWDDDDVGDDFSKHLRAELEK 79

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A835YSW6_9STRA (Pre-RNA processing PIH1/Nop17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW6_9STRA)

HSP 1 Score: 1330 bits (3443), Expect = 0.000e+0
Identity = 1054/1054 (100.00%), Postives = 1054/1054 (100.00%), Query Frame = 1

Query:    1 MSTRMEQVLENLVSGNSEDGFQLQPEEADKLKTSMADPQFRTLLNEYMAEISDPKYRQEQEMYINQLETEQKVPQGKKLIRPQPGFVAKTRFAPAADPQDARKLFVNVVQSADVGAPERAAAQEGDKGGVQLSLPHAAGPPRMEQDKSGAAAATVDVCFHPEAVALALARDDVKGRRPAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAMARDDVKDLMVASALASAEAQLASSYGYAVAVERSYRVVKGLAHRGGAPPSMLYKVKDVQPPAAEAPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQQPQRGAGQPAVPAXXXXXXXXXXXXXXXXLDXXXXXXXXXXLGKSSGSAAAPNGAAPLGNGDGASAALSNGARSPSAXXXXXXXXXXXXXXXXXXXRKGAGAGATRPAEPLMQESSLLVAAEHGGEAITGSRATNGVAACFATAAVAYTLTERGEFELSNHTMSRDVPSRRPRELVLRITIPASVKPSALELDVGQRAVRLNNGKTGKLLLXXXXXXXXXXXXXXXXXXXLDLRLPYPVLENEGSAKVDKARNLLTVTMPVVPXXXXXXXXXXXXXXXXXXXXXXXXAHEALPPEAPLATAPEVQLQVSDGGDGSGDSAQRKERAADDPAPPDHSRWLQAAAPGEKFKFEVPPAAAAAAAAXXXXXXXXXLAXXXXAAAGTAVGLTSNLDLPTAGALSDGAAESGPFIASPAWRGAKPGYAFRRGKHGQGYYVDAHQQAPGVAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEAAPAARPPFDFRENELTASIILQVPDVDADTFEARWTARRGDITARTGGGXXXXXXAVRLSLRLRGDIDPARSRHDVATKNVAIVLYKARPGYWGGLEEEGAXXXXXXXXXXXXXXXAPAGQSQEAPXXXXXXXXXXXXXAGHQDGVPKVPAXXAQPTAADAAEAAAQLAATELAAAAEPDVSAVPLSDVPFQSPLVFDLD 3162
            MSTRMEQVLENLVSGNSEDGFQLQPEEADKLKTSMADPQFRTLLNEYMAEISDPKYRQEQEMYINQLETEQKVPQGKKLIRPQPGFVAKTRFAPAADPQDARKLFVNVVQSADVGAPERAAAQEGDKGGVQLSLPHAAGPPRMEQDKSGAAAATVDVCFHPEAVALALARDDVKGRRPAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAMARDDVKDLMVASALASAEAQLASSYGYAVAVERSYRVVKGLAHRGGAPPSMLYKVKDVQPPAAEAPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQQPQRGAGQPAVPAXXXXXXXXXXXXXXXXLDXXXXXXXXXXLGKSSGSAAAPNGAAPLGNGDGASAALSNGARSPSAXXXXXXXXXXXXXXXXXXXRKGAGAGATRPAEPLMQESSLLVAAEHGGEAITGSRATNGVAACFATAAVAYTLTERGEFELSNHTMSRDVPSRRPRELVLRITIPASVKPSALELDVGQRAVRLNNGKTGKLLLXXXXXXXXXXXXXXXXXXXLDLRLPYPVLENEGSAKVDKARNLLTVTMPVVPXXXXXXXXXXXXXXXXXXXXXXXXAHEALPPEAPLATAPEVQLQVSDGGDGSGDSAQRKERAADDPAPPDHSRWLQAAAPGEKFKFEVPPAAAAAAAAXXXXXXXXXLAXXXXAAAGTAVGLTSNLDLPTAGALSDGAAESGPFIASPAWRGAKPGYAFRRGKHGQGYYVDAHQQAPGVAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEAAPAARPPFDFRENELTASIILQVPDVDADTFEARWTARRGDITARTGGGXXXXXXAVRLSLRLRGDIDPARSRHDVATKNVAIVLYKARPGYWGGLEEEGAXXXXXXXXXXXXXXXAPAGQSQEAPXXXXXXXXXXXXXAGHQDGVPKVPAXXAQPTAADAAEAAAQLAATELAAAAEPDVSAVPLSDVPFQSPLVFDLD
Sbjct:    1 MSTRMEQVLENLVSGNSEDGFQLQPEEADKLKTSMADPQFRTLLNEYMAEISDPKYRQEQEMYINQLETEQKVPQGKKLIRPQPGFVAKTRFAPAADPQDARKLFVNVVQSADVGAPERAAAQEGDKGGVQLSLPHAAGPPRMEQDKSGAAAATVDVCFHPEAVALALARDDVKGRRPAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAMARDDVKDLMVASALASAEAQLASSYGYAVAVERSYRVVKGLAHRGGAPPSMLYKVKDVQPPAAEAPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQQPQRGAGQPAVPAXXXXXXXXXXXXXXXXLDXXXXXXXXXXLGKSSGSAAAPNGAAPLGNGDGASAALSNGARSPSAXXXXXXXXXXXXXXXXXXXRKGAGAGATRPAEPLMQESSLLVAAEHGGEAITGSRATNGVAACFATAAVAYTLTERGEFELSNHTMSRDVPSRRPRELVLRITIPASVKPSALELDVGQRAVRLNNGKTGKLLLXXXXXXXXXXXXXXXXXXXLDLRLPYPVLENEGSAKVDKARNLLTVTMPVVPXXXXXXXXXXXXXXXXXXXXXXXXAHEALPPEAPLATAPEVQLQVSDGGDGSGDSAQRKERAADDPAPPDHSRWLQAAAPGEKFKFEVPPAAAAAAAAXXXXXXXXXLAXXXXAAAGTAVGLTSNLDLPTAGALSDGAAESGPFIASPAWRGAKPGYAFRRGKHGQGYYVDAHQQAPGVAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEAAPAARPPFDFRENELTASIILQVPDVDADTFEARWTARRGDITARTGGGXXXXXXAVRLSLRLRGDIDPARSRHDVATKNVAIVLYKARPGYWGGLEEEGAXXXXXXXXXXXXXXXAPAGQSQEAPXXXXXXXXXXXXXAGHQDGVPKVPAXXAQPTAADAAEAAAQLAATELAAAAEPDVSAVPLSDVPFQSPLVFDLD 1054

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: D7FKK0_ECTSI (PIH1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK0_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 4.120e-31
Identity = 67/144 (46.53%), Postives = 95/144 (65.97%), Query Frame = 1

Query:   61 FQLQPEEADKLKTSMADPQFRTLLNEYMAEISDPKYRQEQEMYINQLETEQKVPQGKKLIRPQPGFVAKTRFAPAADPQDARKLFVNVVQSADVGAPERAAAQEGDKGGVQLSLPHAAGPPRMEQDKSGAAAATVDVCFHPEAV 492
            F++ PEEA K KT++ +P+F+ +L +YM E+ DPK R EQE+YI++LE++ +VP+GK+++ P PGFV KTRF   +   +  KLF NVV S  +  P    +     GG   SLP A GP R E+DK G +  T DVC+HPEA+
Sbjct:   23 FEITPEEATKFKTALGEPEFQAMLRDYMEEMQDPKQRAEQELYISELESQNRVPEGKEVVHPLPGFVIKTRFTRGSKDAEPEKLFTNVVTSDKLAKPYSKISNS-RPGGEAWSLPVAVGPLRKEKDKGGGSTTTFDVCYHPEAL 165

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: D0NLC8_PHYIT (Protein kintoun n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NLC8_PHYIT)

HSP 1 Score: 134 bits (336), Expect = 1.320e-28
Identity = 70/150 (46.67%), Postives = 97/150 (64.67%), Query Frame = 1

Query:   73 PEEADKLKTSMADPQFRTLLNEYMAEISDPKYRQEQEMYINQLETEQKVPQGKKLIRPQPGFVAKTRFAPAADPQDARKLFVNVVQSADVGAPERAAAQEGDKGGVQLSLPHAAGPPRMEQDKSGAAAATVDVCFHPEAVALALARDDVK 522
            PEE  K  ++M DP+FR+LLNEYM EISDP  R+E E Y+ QLETEQKVP  K+L++P PGFV KT++      ++  K+F+NV  S  +  P       G +G    +LP++ GP R+E DK GA+ AT DVCFHP  +  +++R D +
Sbjct:   14 PEEQTKFLSAMKDPEFRSLLNEYMQEISDPHNREESERYLAQLETEQKVPTDKQLVKPTPGFVVKTKW------ENTHKIFINVCSSDKMQPPSNTRVSSGQQG-ASWNLPYSLGPERLEPDKGGASVATFDVCFHPRVIEFSMSRADYR 156

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A6A4ZZ14_9STRA (PIH1 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZZ14_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.550e-28
Identity = 69/150 (46.00%), Postives = 92/150 (61.33%), Query Frame = 1

Query:   61 FQLQPEEADKLKTSMADPQFRTLLNEYMAEISDPKYRQEQEMYINQLETEQKVPQGKKLIRPQPGFVAKTRFAPAADPQDARKLFVNVVQSADVGAPE--RAAAQEGDKGGVQLSLPHAAGPPRMEQDKSGAAAATVDVCFHPEAVALAL 504
            F +  +E      +M DP FR+LLNEYM EISDP +R EQE+Y+ QLE E KVP  K+L+ P+PGFV KT++         RK+FVNV  S  +  P   R A+     GG   +LP+  GP R+E DK G A AT DVC+HP+ ++ A+
Sbjct:   27 FDMTEKEQQSFLKAMKDPDFRSLLNEYMHEISDPAHRAEQELYLRQLENENKVPTDKQLVLPKPGFVLKTKYKQ-------RKIFVNVCSSDKMQPPSSTRVASTPSTAGGTSWNLPYCVGPQRLEPDKGGQAIATFDVCYHPQTISRAM 169

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A329SGH6_9STRA (Protein kintoun n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SGH6_9STRA)

HSP 1 Score: 133 bits (334), Expect = 3.200e-28
Identity = 69/150 (46.00%), Postives = 98/150 (65.33%), Query Frame = 1

Query:   73 PEEADKLKTSMADPQFRTLLNEYMAEISDPKYRQEQEMYINQLETEQKVPQGKKLIRPQPGFVAKTRFAPAADPQDARKLFVNVVQSADVGAPERAAAQEGDKGGVQLSLPHAAGPPRMEQDKSGAAAATVDVCFHPEAVALALARDDVK 522
            PEE  K  ++M DP+FR+LLNEYM EISDP+ R+E E Y++QLE EQKVP  K+L++P PGFV KT++      ++A+K+F+NV  S  +  P       G +G    +LP++ GP R+E DK GA A   DVCFHP  +  ++ R+D +
Sbjct:   49 PEEQTKFLSAMKDPEFRSLLNEYMQEISDPRNREETERYLSQLENEQKVPTDKQLVKPTPGFVVKTKW------ENAQKIFINVCSSDKMQPPSSTRVTSGQQG-TSWNLPYSVGPERLEPDKGGANAPAFDVCFHPRVIEFSMTREDYR 191

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A2P4XKG5_9STRA (Protein kintoun n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XKG5_9STRA)

HSP 1 Score: 132 bits (331), Expect = 7.340e-28
Identity = 70/150 (46.67%), Postives = 95/150 (63.33%), Query Frame = 1

Query:   73 PEEADKLKTSMADPQFRTLLNEYMAEISDPKYRQEQEMYINQLETEQKVPQGKKLIRPQPGFVAKTRFAPAADPQDARKLFVNVVQSADVGAPERAAAQEGDKGGVQLSLPHAAGPPRMEQDKSGAAAATVDVCFHPEAVALALARDDVK 522
            P+E  K  ++M DP+FR+LLNEYM EISDP+ R E E Y+ QLE EQKVP  K+L++P+PGFV KT++      +  +K+FVNV  S  +  P       G +G    +LP++ GP R+E DK G+   T DVCFHP  V  A+AR D +
Sbjct:   32 PQEQQKFLSAMKDPEFRSLLNEYMQEISDPRNRAETEQYLTQLENEQKVPTDKQLVKPKPGFVVKTKW------ESTQKVFVNVCSSDKMQPPSSTRVMTGQQG-TSWNLPYSLGPERLESDKGGSGVPTFDVCFHPRVVEFAMARTDYR 174

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BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A225WMD5_9STRA (Protein kintoun n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WMD5_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.210e-27
Identity = 69/152 (45.39%), Postives = 96/152 (63.16%), Query Frame = 1

Query:   67 LQPEEADKLKTSMADPQFRTLLNEYMAEISDPKYRQEQEMYINQLETEQKVPQGKKLIRPQPGFVAKTRFAPAADPQDARKLFVNVVQSADVGAPERAAAQEGDKGGVQLSLPHAAGPPRMEQDKSGAAAATVDVCFHPEAVALALARDDVK 522
            + P+E  K  ++M DP+FR+LLNEYM EISDP+ R E E Y++QLE EQKVP  K+L++PQPGFV KT++       ++ K+F+NV  S  +  P       G +G     LP++ GP R+E DK G+   T DVCFHP  +  A+AR D +
Sbjct:   20 MNPQEQQKFLSAMKDPEFRSLLNEYMQEISDPRNRAETEQYLSQLENEQKVPTDKQLVKPQPGFVVKTKW-------ESSKVFINVCSSDKMQPPSSTKVTTGQQG-TSWHLPYSLGPERLESDKGGSGVPTFDVCFHPRVIEFAMARADYR 163

[Close]

BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: W2QP92_PHYPN (Protein kintoun n=11 Tax=Phytophthora TaxID=4783 RepID=W2QP92_PHYPN)

HSP 1 Score: 130 bits (326), Expect = 2.680e-27
Identity = 69/150 (46.00%), Postives = 96/150 (64.00%), Query Frame = 1

Query:   73 PEEADKLKTSMADPQFRTLLNEYMAEISDPKYRQEQEMYINQLETEQKVPQGKKLIRPQPGFVAKTRFAPAADPQDARKLFVNVVQSADVGAPERAAAQEGDKGGVQLSLPHAAGPPRMEQDKSGAAAATVDVCFHPEAVALALARDDVK 522
            PEE  +  ++M DP+FR+LLNEYM EISDP+ R+E E Y++QLE+EQKVP  K+LI+P PGFV KT++       +  K+F+NV  S  +  P       G +G    +LP++ GP R+E DK GA+  T DVCFHP  V  ++ R D +
Sbjct:   49 PEEQTRFLSAMKDPEFRSLLNEYMQEISDPRNREETERYLSQLESEQKVPTDKQLIKPTPGFVVKTKW------DNTHKIFINVCSSDKMQPPSSTRVTSGQQG-TSWNLPYSLGPERLEPDKGGASVPTFDVCFHPRVVEFSMTRADYR 191

[Close]

BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: A0A421G292_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G292_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.890e-26
Identity = 69/150 (46.00%), Postives = 96/150 (64.00%), Query Frame = 1

Query:   73 PEEADKLKTSMADPQFRTLLNEYMAEISDPKYRQEQEMYINQLETEQKVPQGKKLIRPQPGFVAKTRFAPAADPQDARKLFVNVVQSADVGAPERAAAQEGDKGGVQLSLPHAAGPPRMEQDKSGAAAATVDVCFHPEAVALALARDDVK 522
            P+E  K  ++M D +FR+LLN+YM EISDP+ R E E Y++QLE EQKVP  K+L++P+PGFV KT++         +K+F+NV  S D   P  +     DK G   +LP++ GP R+E DK G++  T DVCFHP  +  A+AR D K
Sbjct:   23 PDEQHKFLSAMRDSEFRSLLNDYMQEISDPRNRAETEQYLSQLENEQKVPVDKQLVKPKPGFVVKTKW------DGDQKIFLNVCSS-DKLQPPSSTRVTTDKQGTSWNLPYSLGPERLEPDKGGSSVPTFDVCFHPRVIEFAVARTDYK 165

[Close]

BLAST of jgi.p|Trimin1|347435 vs. uniprot
Match: G4ZSA8_PHYSP (Protein kintoun n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZSA8_PHYSP)

HSP 1 Score: 127 bits (319), Expect = 2.200e-26
Identity = 70/150 (46.67%), Postives = 94/150 (62.67%), Query Frame = 1

Query:   73 PEEADKLKTSMADPQFRTLLNEYMAEISDPKYRQEQEMYINQLETEQKVPQGKKLIRPQPGFVAKTRFAPAADPQDARKLFVNVVQSADVGAPERAAAQEGDKGGVQLSLPHAAGPPRMEQDKSGAAAATVDVCFHPEAVALALARDDVK 522
            PEE  K  ++M DP+FR+LLN+YM EISDP+ R E E Y+ QLE EQKVP  K+L++P+PGFV KT++        A+KLFVNV  S  +  P       G +G    +LP++ G  R+E DK G+   T DVCFHP  +  A+AR D +
Sbjct:   27 PEEQQKFLSAMKDPEFRSLLNDYMEEISDPRNRAETEQYLAQLENEQKVPADKQLVKPKPGFVVKTKW------DAAQKLFVNVCSSDKMQPPSSTRVTSGQQG-TSWNLPYSLGLERLEPDKGGSGVPTFDVCFHPRVIEFAMARADYR 169

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347435 vs. uniprot
BLAST of jgi.p|Trimin1|347435 vs. uniprot

BLAST of jgi.p|Trimin1|347435 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZAT5_9STRA	5.690e-43	100.00	DSS1/SEM1 family-domain-containing protein n=1 Tax...	[more]
A0A7S2CP29_9STRA	2.240e-13	58.21	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A485KQ20_9STRA	1.960e-11	61.02	Aste57867_10332 protein n=4 Tax=Aphanomyces TaxID=...	[more]
A0A6B2LYR9_9EUKA	1.580e-10	52.78	Uncharacterized protein n=1 Tax=Arcella intermedia...	[more]
A0A7S1ZHX0_TRICV	1.740e-10	55.17	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]
A0A067CXL5_SAPPC	2.180e-10	51.39	Uncharacterized protein n=3 Tax=Saprolegniaceae Ta...	[more]
A0A7S2UJI1_9STRA	2.620e-10	42.31	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A1W0A6I1_9STRA	5.760e-10	55.93	Uncharacterized protein n=1 Tax=Thraustotheca clav...	[more]
A0A3M6TLK3_POCDA	1.630e-9	57.69	Uncharacterized protein n=1 Tax=Pocillopora damico...	[more]
A0A1Y1IFJ8_KLENI	3.560e-9	53.57	Uncharacterized protein n=1 Tax=Klebsormidium nite...	[more]

Pages

BLAST of jgi.p|Trimin1|347435 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YSW6_9STRA	0.000e+0	100.00	Pre-RNA processing PIH1/Nop17-domain-containing pr...	[more]
D7FKK0_ECTSI	4.120e-31	46.53	PIH1 domain-containing protein n=1 Tax=Ectocarpus ...	[more]
D0NLC8_PHYIT	1.320e-28	46.67	Protein kintoun n=3 Tax=Phytophthora infestans Tax...	[more]
A0A6A4ZZ14_9STRA	2.550e-28	46.00	PIH1 domain-containing protein n=1 Tax=Aphanomyces...	[more]
A0A329SGH6_9STRA	3.200e-28	46.00	Protein kintoun n=2 Tax=Phytophthora TaxID=4783 Re...	[more]
A0A2P4XKG5_9STRA	7.340e-28	46.67	Protein kintoun n=2 Tax=Phytophthora palmivora var...	[more]
A0A225WMD5_9STRA	1.210e-27	45.39	Protein kintoun n=1 Tax=Phytophthora megakarya Tax...	[more]
W2QP92_PHYPN	2.680e-27	46.00	Protein kintoun n=11 Tax=Phytophthora TaxID=4783 R...	[more]
A0A421G292_9STRA	1.890e-26	46.00	Uncharacterized protein n=2 Tax=Phytophthora kerno...	[more]
G4ZSA8_PHYSP	2.200e-26	46.67	Protein kintoun n=1 Tax=Phytophthora sojae (strain...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_12	contig	Contig_12:237365..239152 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|347435\|estExt_Genemark1.C_Ctg_120031
BRITE	ko00000,ko00001,ko00002,ko03051,ko03400,ko04131
KEGG Module	M00341
KEGG Pathway	ko03050,ko03440,ko05169,map03050,map03440,map05169
KEGG ko	ko:K10881
Description	DSS1_SEM1
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2E19H@1\|root,2S8ME@2759\|Eukaryota
Evalue	8.66e-13
Seed ortholog	112098.XP_008613415.1
Hectar predicted targeting category	other localisation
Ec32 ortholog description	DSS1/SEM1
Ec32 ortholog	Ec-12_003050.1
TranscriptId	347757
Track	FilteredModels1
ProteinId	347435

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347435	gene_3703	Tribonema minus UTEX_B_3156	gene	Contig_12 237365..239152 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_3703_2	exon_3703_2	Tribonema minus UTEX_B_3156	exon	Contig_12 237365..237704 -
exon_3703_1	exon_3703_1	Tribonema minus UTEX_B_3156	exon	Contig_12 238951..239152 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_3703	UTR3_3703	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_12 237365..237554 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_3703	CDS_3703	Tribonema minus UTEX_B_3156	CDS	Contig_12 238951..239037 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_3703	UTR5_3703	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_12 239038..239152 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347435	Trimin1\|347435\|estExt_Genemark1.C_Ctg_120031	Tribonema minus UTEX_B_3156	polypeptide	Contig_12 237555..239037 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_12:237365..239152-
coding sequence from alignment at Contig_12:237365..239152-

spliced messenger RNA

>mRNA_3703 ID=mRNA_3703|Name=jgi.p|Trimin1|347435|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=542bp|location=Sequence derived from alignment at Contig_12:237365..239152- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TACCGCAGAAGGTGTGTGGCGCATCGAGCTGCTATTCAATTGGCGAGAAA
CATATCTTCTGGTGCAGAGAGAGGGCGAGCGAGAGAGACAGAGCCGGCGG
CTGATCGAGGACACAATGGTCAAAGAACCAACATCAACCATGGCGGATAA
GAAGGAGCAAGTGCCGGTGGTGGAGGGATTGGAAGAAGACGATGAATTTG
AGGAGTTTGAGGAGGAGAACTGGAGCGCGGCACAGGAGGACACGGCGGAC
GCCGCGCAGTGGCAGGAGGACTGGGACGACGACGCGCTGGACGAGGACTT
CTGCAGCCAGTTACGGCAGGAACTTCAACAAAATGCCACCACCGCCGCGT
GAGCGGTGCTGATTGGCAAAGACCTGATCAGCTGCTGTCGGAACTTCAAC
AAAATGTCACCACCGCCACGTGAGCAGCGGTGACTGACATCGACCTCATC
AGCTGCTATAGGAGCTTCAACGAATCGCCACCGCTGCGTTGATGATGGGG
GGGGGGGGGAAGGGGGGGGAGGGGGGGGCTTGCTGATGAATT

protein sequence of jgi.p|Trimin1|347435

>Trimin1|347435|estExt_Genemark1.C_Ctg_120031 ID=Trimin1|347435|estExt_Genemark1.C_Ctg_120031|Name=jgi.p|Trimin1|347435|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=79bp
MVKEPTSTMADKKEQVPVVEGLEEDDEFEEFEEENWSAAQEDTADAAQWQ
EDWDDDALDEDFCSQLRQELQQNATTAA*

mRNA from alignment at Contig_12:237365..239152-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3703 ID=mRNA_3703|Name=jgi.p|Trimin1|347435|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1788bp|location=Sequence derived from alignment at Contig_12:237365..239152- (Tribonema minus UTEX_B_3156 )
TACCGCAGAAGGTGTGTGGCGCATCGAGCTGCTATTCAATTGGCGAGAAA
CATATCTTCTGGTGCAGAGAGAGGGCGAGCGAGAGAGACAGAGCCGGCGG
CTGATCGAGGACACAATGGTCAAAGAACCAACATCAACCATGGCGGATAA
GAAGGAGCAAGTGCCGGTGGTGGAGGGATTGGAAGAAGACGATGAATTTG
AGGTAAAGAGAACGATGCCTGCACACTAGCCCTCCTCAAGCAGCAGGATC
ACTGTTGGTGTGATTTCGCACGATCTTTCTAGGGCGAGCTCCAGGCGCGT
CGAACAGGTGATGGAAGTTGATGAAAGCTGAAAGCTGACAAGCTGATGAT
ACGGTGTATCCGTACACTAAGTTTGCAGGGCTAAGTGTACTTGCGGATGA
ATGTTAGCGGTTTGTTGAGGTTTTCGCTACATCACAGAGACTGTGTCCGG
CACGCGGACGCACCTGAAAACTGCAACCAGCAAGCCGAATAGCGGCACAG
ACTTGGCCTCGCACTTTCCTCTTTTTGTGATAAAACTCGTATGCGCAGTG
CATCCGAGCCACACCATGGCGCTGTCATGTTGCAATCAGCACAACTGACA
GCGTTGCCTCATTTTCATGGCAGACTGAACCCCGGACATTGCTCCTGTGC
AGCACTCCGCTTGGTGTGAAACTGACCACGCCACGCACGCTTGGCTGCTG
TACATGCTGATAGCACAACAATCAACGCCTGCAACGCGTCAGATGCGCTG
TTGACAGCATAAAGGCTCATGGTGCAGATGGGGTGCTGTTATGCAGCAGA
CTCAACCATGCATGGTCAGCGATGAGTGAGCACATCTTTGCGCTTATTGT
AAAAGCATACACTACATACGACGTCCGGCGCTCGCCCCACCATGTTCGAG
CTGTGATTTACCACAAGCGCGACTGCGCCTGCACAGCGCGCGCGGCGCGC
CGCCCTACGCGCTCTGCGCAGGAGCCTGAGTAGGAGAGCTGGGCGGCGGC
GCAGGAGGATGCCGCAGAAGCCAAATATAATCACTGCTGAAGTGCAAGCA
TCAGCACGTACAGTAGCGAGTGTAACTGGTATTGACGCTCACTTGGAGGC
GCGCGCAGCACGCTGTCCCCCGCACGCCGCGCGGGAGAGGAAATGGAAAT
GGGACGGTCCCGCAGGAAGACGTCGTGGCGGACGCTGCTTTCATTCCAGT
ATTCAGTACACGTAGCATCTGAGCTCTCTCGTGGCTGACTGAACGCGCAG
GTGTTGTGAGGGTTCGAGCGACGCGTGTTGCCCTTCACGCGCCGCGCAGG
AGTTTGAGGAGGAGAACTAGAGCACGGCGCAGGAGGACACGGCGGACACA
CTGCTATCCGCATGTGGAGACATGTAACTGATACACATACCATCTGACTT
GATGCAACTGATTGAACGAACGCGCGTCGCCCCGCACACGCCGCGCAGGA
GTTTGAGGAGGAGAACTGGAGCGCGGCACAGGAGGACACGGCGGACGCCG
CGCAGTGGCAGGAGGACTGGGACGACGACGCGCTGGACGAGGACTTCTGC
AGCCAGTTACGGCAGGAACTTCAACAAAATGCCACCACCGCCGCGTGAGC
GGTGCTGATTGGCAAAGACCTGATCAGCTGCTGTCGGAACTTCAACAAAA
TGTCACCACCGCCACGTGAGCAGCGGTGACTGACATCGACCTCATCAGCT
GCTATAGGAGCTTCAACGAATCGCCACCGCTGCGTTGATGATGGGGGGGG
GGGGGAAGGGGGGGGAGGGGGGGGCTTGCTGATGAATT

Coding sequence (CDS) from alignment at Contig_12:237365..239152-

>mRNA_3703 ID=mRNA_3703|Name=jgi.p|Trimin1|347435|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=237bp|location=Sequence derived from alignment at Contig_12:237365..239152- (Tribonema minus UTEX_B_3156 )
ATGGTCAAAGAACCAACATCAACCATGGCGGATAAGAAGGAGCAAGTGCC
GGTGGTGGAGGGATTGGAAGAAGACGATGAATTTGAGGAGTTTGAGGAGG
AGAACTGGAGCGCGGCACAGGAGGACACGGCGGACGCCGCGCAGTGGCAG
GAGGACTGGGACGACGACGCGCTGGACGAGGACTTCTGCAGCCAGTTACG
GCAGGAACTTCAACAAAATGCCACCACCGCCGCGTGA