Trimin1|347420|estExt_Genemark1.C_Ctg_120001 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347420
Unique NameTrimin1|347420|estExt_Genemark1.C_Ctg_120001
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length594
Homology
BLAST of jgi.p|Trimin1|347420 vs. uniprot
Match: A0A836CMQ2_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ2_9STRA)

HSP 1 Score: 785 bits (2028), Expect = 2.210e-280
Identity = 531/531 (100.00%), Postives = 531/531 (100.00%), Query Frame = 0
Query:    1 MANEAAAIAAGESASEAQQQQQQLGLPAVNAGDTSAAKEDHLKAQLEELLKFYTAPSEGAWPQSSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAGSTASFDEVFGELSRHGRVVAFDRPAFGLTERVMPQEGVPWQLSARTLGENPYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRAIQLRPQAVRAAVLTAPAVLNPLDARFSMGRDNGGSIFSPIANLRTRLSVAAQGLXXXXXXXXXXXXXXXXQAPNVXXXXXXXXXXXXXXXXXASAAGLALMTSPTDVAVDMVRNVTLSEDLESRVRRNFHDPALVREKPELVGKYVTPLREDGWDRGLLEFYRAQASEAAPGSRLLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRAAWKGPVLVXXXXXXXXXXXXXXXXXXXVIAGETDPVXXXXXXXXXXXXXXXXXTVPLSACQFVAERFDARLRVIEQCAHIPMDEVPEAWTRAVVSFVDSKDVLARGRPPLPWRQRRLLRKQGS 531
            MANEAAAIAAGESASEAQQQQQQLGLPAVNAGDTSAAKEDHLKAQLEELLKFYTAPSEGAWPQSSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAGSTASFDEVFGELSRHGRVVAFDRPAFGLTERVMPQEGVPWQLSARTLGENPYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRAIQLRPQAVRAAVLTAPAVLNPLDARFSMGRDNGGSIFSPIANLRTRLSVAAQGLXXXXXXXXXXXXXXXXQAPNVXXXXXXXXXXXXXXXXXASAAGLALMTSPTDVAVDMVRNVTLSEDLESRVRRNFHDPALVREKPELVGKYVTPLREDGWDRGLLEFYRAQASEAAPGSRLLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRAAWKGPVLVXXXXXXXXXXXXXXXXXXXVIAGETDPVXXXXXXXXXXXXXXXXXTVPLSACQFVAERFDARLRVIEQCAHIPMDEVPEAWTRAVVSFVDSKDVLARGRPPLPWRQRRLLRKQGS
Sbjct:    1 MANEAAAIAAGESASEAQQQQQQLGLPAVNAGDTSAAKEDHLKAQLEELLKFYTAPSEGAWPQSSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAGSTASFDEVFGELSRHGRVVAFDRPAFGLTERVMPQEGVPWQLSARTLGENPYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRAIQLRPQAVRAAVLTAPAVLNPLDARFSMGRDNGGSIFSPIANLRTRLSVAAQGLXXXXXXXXXXXXXXXXQAPNVXXXXXXXXXXXXXXXXXASAAGLALMTSPTDVAVDMVRNVTLSEDLESRVRRNFHDPALVREKPELVGKYVTPLREDGWDRGLLEFYRAQASEAAPGSRLLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRAAWKGPVLVXXXXXXXXXXXXXXXXXXXVIAGETDPVXXXXXXXXXXXXXXXXXTVPLSACQFVAERFDARLRVIEQCAHIPMDEVPEAWTRAVVSFVDSKDVLARGRPPLPWRQRRLLRKQGS 531          
BLAST of jgi.p|Trimin1|347420 vs. uniprot
Match: D7FNS2_ECTSI (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNS2_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 1.130e-67
Identity = 138/327 (42.20%), Postives = 190/327 (58.10%), Query Frame = 0
Query:   42 LKAQLEELLKFYT--APSEGAWPQSSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAGSTASFDEVFGELSRHGRVVAFDRPAFGLTERVMPQEG-VPWQLSARTLGENPYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRAIQLRPQAVRAAVLTAPAVLNPLDARFSMGRDNGGSIFSPIANLRTRLSVAAQGLXXXXXXXXXXXXXXXXQAPNVXXXXXXXXXXXXXXXXXASAAGLALMTSPTDVAVDMVRNVTLSEDLESRVRRNFHDPALVREKPELVGKYVTPLREDGWDRGLLEFYRAQASEAAPGSRLLE 365
            + A +++LL+ Y   AP E  WP    +RVRGV + YK                              V G+LS +GRV++FDRP FG TERVMP  G +PW+L ++T+GENPY+A FAAK++FG+LDRLGVD+ ++V+HSLGAQVALRA + RP  +RA VL APAVLNPLD++F MGRD   ++FS I NLRTR+ + A+                                         +A  L L+  P +  +  VRN+TL+ D+E RV++NFHD ++   +PELV KY+ PLR+  WDRGL+ FY++   E  PG +LL+
Sbjct:  200 VNALVKKLLEEYCSKAPLEEQWPPGRRIRVRGVEIFYK------------------------------VVGDLSEYGRVISFDRPGFGRTERVMPPAGGLPWRLCSKTMGENPYSADFAAKVLFGVLDRLGVDKVIVVAHSLGAQVALRAARSRPGMIRAMVLVAPAVLNPLDSKFVMGRDPNANLFSAILNLRTRVEMTAK----------------------------------------LAAFNLQLL-QPGEGPLHAVRNMTLNGDVEERVQQNFHDRSITLGRPELVAKYIEPLRDPLWDRGLVHFYKSLQGEVQPGEQLLQ 455          
BLAST of jgi.p|Trimin1|347420 vs. uniprot
Match: A0A7S3UU90_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU90_HETAK)

HSP 1 Score: 115 bits (289), Expect = 2.510e-26
Identity = 63/127 (49.61%), Postives = 78/127 (61.42%), Query Frame = 0
Query:   63 QSSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAGSTASFDEVFGELSRHG-RVVAFDRPAFGLTERVMPQEGVPWQLSARTLGENPYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRA 188
            +S +  ++GV  HYKDT P           VLLHGFAGSTA +D  +G L+  G RVVAFDRPAFGLT R      +PW  +  TL ++PY   F+   ++ +LDRL V   VLV HSLG QVALRA
Sbjct:   51 ESKYTTIQGVQFHYKDTGPPPGRRGRYRTVVLLHGFAGSTACWDAAWGGLAAAGARVVAFDRPAFGLTSRPTAPLNLPWSANPETLFQDPYGVDFSVAALWRLLDRLRVPRAVLVGHSLGCQVALRA 177          
BLAST of jgi.p|Trimin1|347420 vs. uniprot
Match: A0A3M1DRE7_9CHLR (Alpha/beta hydrolase (Fragment) n=1 Tax=Thermoflexia bacterium TaxID=2420334 RepID=A0A3M1DRE7_9CHLR)

HSP 1 Score: 115 bits (287), Expect = 1.840e-25
Identity = 69/151 (45.70%), Postives = 85/151 (56.29%), Query Frame = 0
Query:   56 PSEGAWPQSSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAGSTASFDEVFGELSRHGRVVAFDRPAFGLTERVMPQEGVPWQLSARTLGENPYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRAIQLRPQAVRAAVLTAPAV 206
            P + A P S F+ V G+ VHYK    G      +P F+LLHGFA ST S+ EV   +S  G VVAFDRP FGLTER MP E   W       G +PY+ +  A L  G++D LG+   VLV +S G  VAL      P+ V A VL +PAV
Sbjct:   37 PEQLADPDSRFVEVNGIAVHYKTAGSG------RPAFLLLHGFAASTFSWREVMEPMSEWGTVVAFDRPGFGLTERPMPGE---WT------GRSPYSPEAQADLTVGLMDALGIKRAVLVGNSAGGAVALLTALTYPERVEALVLVSPAV 172          
BLAST of jgi.p|Trimin1|347420 vs. uniprot
Match: A0A3M1EXU4_9CHLR (Alpha/beta fold hydrolase (Fragment) n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EXU4_9CHLR)

HSP 1 Score: 113 bits (282), Expect = 5.730e-25
Identity = 65/151 (43.05%), Postives = 90/151 (59.60%), Query Frame = 0
Query:   56 PSEGAWPQSSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAGSTASFDEVFGELSRHGRVVAFDRPAFGLTERVMPQEGVPWQLSARTLGENPYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRAIQLRPQAVRAAVLTAPAV 206
            P + A P S F+RV+GV +HYK      +  +G+P FVLLHGF  S  S+ +V  EL+R G V+A+DRPAFGL+ER +  EG           +NPY+ +     +FG++D LGV + +LV +S G  VALRA   RP  V+A +    AV
Sbjct:   37 PRQLADPDSRFIRVQGVDLHYK------MAGQGEPVFVLLHGFGASLFSWHKVMPELARLGAVIAYDRPAFGLSERPLQWEG-----------QNPYSPEAQVDQLFGLMDALGVQQAILVGNSAGGTVALRAALARPDRVQAIIAVDAAV 170          
BLAST of jgi.p|Trimin1|347420 vs. uniprot
Match: A0A0S7BK97_9CHLR (Predicted hydrolase n=1 Tax=Longilinea arvoryzae TaxID=360412 RepID=A0A0S7BK97_9CHLR)

HSP 1 Score: 115 bits (288), Expect = 1.190e-24
Identity = 62/154 (40.26%), Postives = 87/154 (56.49%), Query Frame = 0
Query:   53 YTAPSEGAWPQSSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAGSTASFDEVFGELSRHGRVVAFDRPAFGLTERVMPQEGVPWQLSARTLGENPYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRAIQLRPQAVRAAVLTAPAV 206
            Y    E A P S F+ + G+ VHYK    G      +P  +LLHGF  S  S+ EV   L++H  V+A+DRP FGLT+R+MP E   W+       ENPY+A+    ++ G++D LG+++ +L+ HS G  VAL + Q  PQ     VL  PAV
Sbjct:   36 YAHEMELAEPDSRFIEIDGIRVHYKRIGAG------EPVIILLHGFGASVFSWREVMAPLAKHATVLAYDRPGFGLTQRLMPGE---WKC------ENPYSAQAQVAILIGLMDELGIEKAILIGHSAGGTVALASAQAHPQRFSGLVLVDPAV 174          
BLAST of jgi.p|Trimin1|347420 vs. uniprot
Match: A0A3N5QWG1_9CHLR (Alpha/beta hydrolase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5QWG1_9CHLR)

HSP 1 Score: 114 bits (284), Expect = 3.370e-24
Identity = 69/157 (43.95%), Postives = 91/157 (57.96%), Query Frame = 0
Query:   50 LKFYTAPSEGAWPQSSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAGSTASFDEVFGELSRHGRVVAFDRPAFGLTERVMPQEGVPWQLSARTLGENPYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRAIQLRPQAVRAAVLTAPAV 206
            LK    P E A   S F+ V G+ VHYK++  GG      P  +LLHGF  S  S+ EV   LS + RVVAFDRPAFGLTER  P E   W++      ENPY+     +L+ G++D+LG+D+ VLV +S G  V++      PQ V+A +L  PAV
Sbjct:   31 LKDTVPPEELADSDSKFVEVNGLNVHYKESGDGG------PAIILLHGFLASIFSWREVMEPLSEYSRVVAFDRPAFGLTER--PLE---WEV------ENPYSRDSQVELVIGLMDQLGIDQAVLVGNSAGGTVSMSTALKYPQRVKALILVDPAV 170          
BLAST of jgi.p|Trimin1|347420 vs. uniprot
Match: A0A3B9A239_9CHLR (Alpha/beta hydrolase (Fragment) n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A3B9A239_9CHLR)

HSP 1 Score: 111 bits (278), Expect = 6.000e-24
Identity = 66/156 (42.31%), Postives = 88/156 (56.41%), Query Frame = 0
Query:   64 SSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAGSTASFDEVFGELSRHGRVVAFDRPAFGLTERVMPQEGVPWQLSARTLGENPYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRAIQLRPQAVRAAVLT---------APAVLNPL 210
            S F+ V G+ VHYK       +  G+P  +LLHGF  ST S+ EV   L+  G V+AFDRPAFGLTER MP +   W+      GE+PYT     +L+ G++DRLG++  VL+ +S G  VA+ A    P+ V A VL          APA + PL
Sbjct:   44 SRFVEVNGIDVHYKQ------YGSGEPVMILLHGFGASTFSWREVMKPLAETGTVMAFDRPAFGLTERPMPGD---WE------GESPYTLNSQVRLLIGLMDRLGIERAVLIGNSAGGTVAMAAALAHPERVSALVLVDAAIYAGGGAPAWIRPL 184          
BLAST of jgi.p|Trimin1|347420 vs. uniprot
Match: A0A0P6X3A2_9CHLR (AB hydrolase-1 domain-containing protein n=1 Tax=Bellilinea caldifistulae TaxID=360411 RepID=A0A0P6X3A2_9CHLR)

HSP 1 Score: 111 bits (277), Expect = 2.990e-23
Identity = 66/156 (42.31%), Postives = 89/156 (57.05%), Query Frame = 0
Query:   64 SSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAGSTASFDEVFGELSRHGRVVAFDRPAFGLTERVMPQEGVPWQLSARTLGENPYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRAIQLRPQAVRAAVLT---------APAVLNPL 210
            S F+ V+G+ VHYK       +  G+P  +LLHGF  ST S+ EV   L+++G V+AFDRPAFGLTER MP E   W       GE+PYT     +L+ G++D+LG++  VL+ +S G  VA  A    P+ V A VL          APA + PL
Sbjct:   44 SRFVEVKGIDVHYKQ------YGSGEPVMILLHGFGASTFSWREVMQPLAQYGTVIAFDRPAFGLTERPMPGE---WS------GESPYTLNSQIQLLMGLMDQLGIERAVLIGNSAGGTVAAAAALAYPERVSALVLVDAAIYAGGGAPAWIRPL 184          
BLAST of jgi.p|Trimin1|347420 vs. uniprot
Match: A0A523BC97_9ARCH (Alpha/beta hydrolase n=1 Tax=Candidatus Verstraetearchaeota archaeon TaxID=2250257 RepID=A0A523BC97_9ARCH)

HSP 1 Score: 111 bits (277), Expect = 3.210e-23
Identity = 62/143 (43.36%), Postives = 82/143 (57.34%), Query Frame = 0
Query:   64 SSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAGSTASFDEVFGELSRHGRVVAFDRPAFGLTERVMPQEGVPWQLSARTLGENPYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRAIQLRPQAVRAAVLTAPAV 206
            S FM V G+ VHYK      ++  G+P  VLLHGF   + SF+ V  ELSRHG V+ FDRPAFG TER + +    W       G NPY+++FAA L  G++D LG+   VL+ HS G  +AL +    P+ V A +    AV
Sbjct:   45 SKFMVVNGLKVHYK------IYGSGEPAIVLLHGFGAYSFSFEPVIEELSRHGTVIVFDRPAFGFTERPLLEN---WD------GPNPYSSEFAADLTVGLMDGLGIHRAVLLGHSAGGAIALLSYYRHPERVEALIFEDAAV 172          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347420 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMQ2_9STRA2.210e-280100.00Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
D7FNS2_ECTSI1.130e-6742.20AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
A0A7S3UU90_HETAK2.510e-2649.61Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A3M1DRE7_9CHLR1.840e-2545.70Alpha/beta hydrolase (Fragment) n=1 Tax=Thermoflex... [more]
A0A3M1EXU4_9CHLR5.730e-2543.05Alpha/beta fold hydrolase (Fragment) n=1 Tax=Caldi... [more]
A0A0S7BK97_9CHLR1.190e-2440.26Predicted hydrolase n=1 Tax=Longilinea arvoryzae T... [more]
A0A3N5QWG1_9CHLR3.370e-2443.95Alpha/beta hydrolase n=1 Tax=Chloroflexi bacterium... [more]
A0A3B9A239_9CHLR6.000e-2442.31Alpha/beta hydrolase (Fragment) n=1 Tax=Anaeroline... [more]
A0A0P6X3A2_9CHLR2.990e-2342.31AB hydrolase-1 domain-containing protein n=1 Tax=B... [more]
A0A523BC97_9ARCH3.210e-2343.36Alpha/beta hydrolase n=1 Tax=Candidatus Verstraete... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 544..564
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 571..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availablePANTHERPTHR43689HYDROLASEcoord: 20..365
NoneNo IPR availablePANTHERPTHR43689:SF1ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEINcoord: 449..513
NoneNo IPR availablePANTHERPTHR43689:SF1ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEINcoord: 20..365
NoneNo IPR availablePANTHERPTHR43689HYDROLASEcoord: 449..513
IPR000073Alpha/beta hydrolase fold-1PFAMPF00561Abhydrolase_1coord: 91..209
e-value: 2.7E-12
score: 46.9
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820alpha/beta hydrolasecoord: 58..508
e-value: 2.1E-39
score: 138.0
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 60..507

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:577..7479 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347420mRNA_3677Tribonema minus UTEX_B_3156 mRNAContig_12 197..7495 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347420|estExt_Genemark1.C_Ctg_120001 ID=Trimin1|347420|estExt_Genemark1.C_Ctg_120001|Name=jgi.p|Trimin1|347420|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=594bp
MANEAAAIAAGESASEAQQQQQQLGLPAVNAGDTSAAKEDHLKAQLEELL
KFYTAPSEGAWPQSSFMRVRGVLVHYKDTDPGGLHTRGQPCFVLLHGFAG
STASFDEVFGELSRHGRVVAFDRPAFGLTERVMPQEGVPWQLSARTLGEN
PYTAKFAAKLMFGILDRLGVDECVLVSHSLGAQVALRAIQLRPQAVRAAV
LTAPAVLNPLDARFSMGRDNGGSIFSPIANLRTRLSVAAQGLIFSPIANL
CTRLSVAAQAPNVIFSPIANLRTRLSVAAQASAAGLALMTSPTDVAVDMV
RNVTLSEDLESRVRRNFHDPALVREKPELVGKYVTPLREDGWDRGLLEFY
RAQASEAAPGSRLLEEASEAAAGSRLLEEASEAAPGSRLLEEASDVAPGL
RLLEEVRAAWKGPVLVRAVWKGPVLVRAVWKGLVLVIAGETDPVRAVWKG
PVLVIAGETDPTVPLSACQFVAERFDARLRVIEQCAHIPMDEVPEAWTRA
VVSFVDSKDVLARGRPPLPWRQRRLLRKQGSATQQQQQQVPQQVQQQQQQ
QQQVLQQQQVLQQQQRHVQQHALRQPQQQQQQQQQEEEQGYLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000073AB_hydrolase_1
IPR029058AB_hydrolase