mRNA_3716 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|160152
Unique Name	mRNA_3716
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|160152 vs. uniprot
Match: A0A835ZES9_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES9_9STRA)

HSP 1 Score: 267 bits (682), Expect = 4.340e-82
Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 1

Query:    1 LQYLRDNGCPWNASIYSAALSGGHVKVLHXXXXXXXXXLPTKDGSEQAARNGSLEVXXXXXXXXXCWDEFCSCTAAAGXXXXXXXXXXXXXXXXXNASIYSAXXXXXXXXXXXXXXXXXXXXLSATCRSWQAAEAGSLAXXXXXXXXXXXXDTSVCGIAATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWDERTIXXXXXXXXXXXXXXXXXXXXXXXXQQSCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTTDGAELAARNGXXXXXXXXXXXXXXXDRSICEXXXXXXXXXXXXXXXXXXAHFDSCGVAFEAGRAGQVSVAKWLFARKESSIHLLSVTAAQEGHVKLLQ 1248
            LQYLRDNGCPWNASIYSAALSGGHVKVLHXXXXXXXXXLPTKDGSEQAARNGSLEVXXXXXXXXXCWDEFCSCTAAAGXXXXXXXXXXXXXXXXXNASIYSAXXXXXXXXXXXXXXXXXXXXLSATCRSWQAAEAGSLAXXXXXXXXXXXXDTSVCGIAATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWDERTIXXXXXXXXXXXXXXXXXXXXXXXXQQSCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTTDGAELAARNGXXXXXXXXXXXXXXXDRSICEXXXXXXXXXXXXXXXXXXAHFDSCGVAFEAGRAGQVSVAKWLFARKESSIHLLSVTAAQEGHVKLLQ
Sbjct:    1 LQYLRDNGCPWNASIYSAALSGGHVKVLHXXXXXXXXXLPTKDGSEQAARNGSLEVXXXXXXXXXCWDEFCSCTAAAGXXXXXXXXXXXXXXXXXNASIYSAXXXXXXXXXXXXXXXXXXXXLSATCRSWQAAEAGSLAXXXXXXXXXXXXDTSVCGIAATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWDERTIXXXXXXXXXXXXXXXXXXXXXXXXQQSCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTTDGAELAARNGXXXXXXXXXXXXXXXDRSICEXXXXXXXXXXXXXXXXXXAHFDSCGVAFEAGRAGQVSVAKWLFARKESSIHLLSVTAAQEGHVKLLQ 416

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|160152 vs. uniprot

BLAST of jgi.p|Trimin1|160152 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZES9_9STRA	4.340e-82	100.00	Ankyrin repeat-containing domain protein n=1 Tax=T...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_12	contig	Contig_12:310617..318380 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|160152\|e_gw1.12.52.1
Hectar predicted targeting category	other localisation
TranscriptId	160474
Track	FilteredModels1
ProteinId	160152

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|160152	gene_3716	Tribonema minus UTEX_B_3156	gene	Contig_12 310617..318380 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|160152	Trimin1\|160152\|e_gw1.12.52.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_12 310617..318380 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_3716_1	exon_3716_1	Tribonema minus UTEX_B_3156	exon	Contig_12 310617..310826 +
exon_3716_2	exon_3716_2	Tribonema minus UTEX_B_3156	exon	Contig_12 313568..313849 +
exon_3716_3	exon_3716_3	Tribonema minus UTEX_B_3156	exon	Contig_12 314303..314421 +
exon_3716_4	exon_3716_4	Tribonema minus UTEX_B_3156	exon	Contig_12 317409..317504 +
exon_3716_5	exon_3716_5	Tribonema minus UTEX_B_3156	exon	Contig_12 317837..318380 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_3716	CDS_3716	Tribonema minus UTEX_B_3156	CDS	Contig_12 310617..310826 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_12:310617..318380+
coding sequence from alignment at Contig_12:310617..318380+

spliced messenger RNA

>mRNA_3716 ID=mRNA_3716|Name=jgi.p|Trimin1|160152|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1251bp|location=Sequence derived from alignment at Contig_12:310617..318380+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTGCAATATCTGCGTGACAACGGCTGCCCCTGGAATGCGAGCATTTACTC
TGCGGCGTTAAGCGGCGGGCACGTAAAGGTGCTGCACTACGCCAGAGAGC
AGGGCTGCCCATGGCTGCCCACAAAGGACGGGTCAGAGCAGGCAGCAAGG
AACGGGAGCCTAGAGGTACTGCAGTGGGCAATTCAGAATGGCTGCTGCTG
GGATGAATTTTGCAGTTGCACAGCAGCAGCGGGGGGCGGCCACCTTTGCG
TACTGCAATACCTGCGTGACAACGGCTGCCCGTGGAATGCGAGCATTTAC
TCTGCGGCGTTAAGCGGCGGGCACGTAGAGGTGCTGCGCTACGCCAGAGA
GCAGGGATGCCCATGGTTGTCTGCAACATGCAGGTCGTGGCAGGCGGCGG
AGGCGGGCAGCCTAGCGGCATTGCAGTGGGCAATTGAGAATGGCTGTTGC
TGGGATACATCCGTATGCGGGATAGCCGCAACAAAGGGGGATTTTGAGGT
GCTTGAGTGGGCTTACGCAAACGGATGTGAGTGGGACGAGTCCATATGTT
GCTCAGCAGCTGAGCAGGGGAACAAAGCAGTTGTAGACTGGGCGGCAGCG
CGGGGGTGCACCATGAGTGCTGCGACTTGCGCAGTTGCCGCCCGTAGCGG
CCACCTGCCTTCGCTGCAGTGGCTGCGCGAGCAGGGCTGCGAGTGGGACG
AGCGCACCATCTGTGCTGCAGCTGCAGAGGCAGGCCACTTGGCAGTAGTC
AAATGGCTGCACTCGGCAGGCTGCCAGTGGGACCAGCAAAGTTGCACCGC
AGCAGCTAGGGGCGGTCACCTGCACGTACTGCAATATCTGCGTGACAACG
AATGCCCCTGGGATGCGAGCATTTACTCTGCGGCGTTAAGCGGCGGGCAC
ATAGAGGTGCTGCGCTATGCCAGAGAGCAGGGCTGCCCATGGTTGCCTAC
AACGGACGGGGCAGAGCTGGCAGCAAGGAACGGGAGCCTAGAGGTACTGC
AGTGGGCAATTGAGAATGGCTGTTGCTGGGATAGATCCATATGTGAATTA
GCCGCAAGAAAGGGCGATGTCGCGATGCTTGAGTGGGCTGTAGCCAATGG
CGCTCACTTTGACTCTTGCGGAGTAGCATTCGAAGCCGGCAGGGCAGGAC
AGGTGTCGGTTGCAAAATGGCTTTTCGCGCGCAAGGAGAGTTCCATCCAC
CTTCTGTCAGTGACTGCGGCACAGGAGGGGCACGTCAAGCTCCTGCAGTG
A

protein sequence of jgi.p|Trimin1|160152

>Trimin1|160152|e_gw1.12.52.1 ID=Trimin1|160152|e_gw1.12.52.1|Name=jgi.p|Trimin1|160152|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=417bp
LQYLRDNGCPWNASIYSAALSGGHVKVLHYAREQGCPWLPTKDGSEQAAR
NGSLEVLQWAIQNGCCWDEFCSCTAAAGGGHLCVLQYLRDNGCPWNASIY
SAALSGGHVEVLRYAREQGCPWLSATCRSWQAAEAGSLAALQWAIENGCC
WDTSVCGIAATKGDFEVLEWAYANGCEWDESICCSAAEQGNKAVVDWAAA
RGCTMSAATCAVAARSGHLPSLQWLREQGCEWDERTICAAAAEAGHLAVV
KWLHSAGCQWDQQSCTAAARGGHLHVLQYLRDNECPWDASIYSAALSGGH
IEVLRYAREQGCPWLPTTDGAELAARNGSLEVLQWAIENGCCWDRSICEL
AARKGDVAMLEWAVANGAHFDSCGVAFEAGRAGQVSVAKWLFARKESSIH
LLSVTAAQEGHVKLLQ*

mRNA from alignment at Contig_12:310617..318380+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3716 ID=mRNA_3716|Name=jgi.p|Trimin1|160152|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7764bp|location=Sequence derived from alignment at Contig_12:310617..318380+ (Tribonema minus UTEX_B_3156 )
CTGCAATATCTGCGTGACAACGGCTGCCCCTGGAATGCGAGCATTTACTC
TGCGGCGTTAAGCGGCGGGCACGTAAAGGTGCTGCACTACGCCAGAGAGC
AGGGCTGCCCATGGCTGCCCACAAAGGACGGGTCAGAGCAGGCAGCAAGG
AACGGGAGCCTAGAGGTACTGCAGTGGGCAATTCAGAATGGCTGCTGCTG
GGATGAATTTGTATGCGGAGAAGCCGCAAACAGGGGGATGCTCGAGTGGG
CGGAGGCCCATGGCGCTCATTTCGACTCTTGCGTAATAAAATTCAAAGCC
AGTACTGTCGGGCACTTGTCAGTTGCAAAGTGGCTTCTCGCACGCAAGAA
TTGTGACATGGACCTTCTGTTAGTGACTGCGGCAGGGGTGGGGCACGTCG
GGCTCCTGCAGTGGGCTCAGTCAAACGGCATCCTTGCTGAGGACAAGCTG
CAGTACGCGTACAACGCCGCACAAGGCAATCAAGTCGAGGTGTTGGCGTG
GATGCTTGCAGCCGGTCACCTCGTGCCAGCACAACTATTGCCCGATTCGT
GTATCCGATTTCGGGTGTATAATCCTGCTGCAGGTGCAGCAATTGGGGGT
CACGTTAGCATACTGAAGTGGCTCAAGGCCCATGGCCTCTTCAGAAACGA
GCAGGTACTTGAGAGAGTGCAGCTAAGAATAGTCATTTCGGGGTGCTCGA
GTGGGCATTTTCAAAGGGGTGCGAGTGGGATCACTTCATATGTTGCTCAG
CAGCAGAGCAGGGGAACAAAGCCGTTGTAGACTGGGCGGCAGCGCAGGGA
TGCACGTGTGCCGCTCACAGCAGCGCTTGATGCATGCATGCATGTTCTTG
CATGATCACCAGCTGCTTCTGCCAATACGCACTGAATATGGAGGTGTTCT
TCACTGAGTTGTCTTCTTTGCCCGTGTGCCTCTTAATGCGACTGCGAGCA
CCAGCGGCACTGTATTCCCTTGACCAATAGTTGCTTGTCCCAAGAGATTG
CGCGTTTAGTGTGCTTGCCCTGCCTGGACCTGTCTGTCAGATGTCGGAAC
GCTGGTGAGCCACTGCATGTATGTGCCGAAATTAGGCGTCAAATCTCCTT
GCATACTTACATGCGATGAGCAAGACTTTTGTGCCTGTAGCGTAAGCTCG
TGCACGCGCAAGGCTGCTTGTTCAGGCATAGCTGCACTTGAAGTAGCACA
TGAGCAGACACTACAACACCACTCTGCAGACCAGCACAATGTGGTGCCCA
GTATACATGTGGTGCAGATTATACATAGGGCCACACTGTGTTCTCCCAAA
CAATCAAACTACAATGCGGGCCTTGACACAAATGCTCATTTCATAGCAAA
TTGCCAGTATATCAATACTTTCTAGTACTCATTACTGTAGCGCATTTCAG
CACTTTGAAGGGACTGAGTGCTTGATTATTTGTTTTGGCATACAAGTAGT
TTTTCCATGCTGCGTGTCAAAGCATGACAAGCTTTGATTATGACCAACGG
ATTGTTGCCCTGGCAGAGGCGTTCAACTAGGTCAGCGTCACCATCATGCA
ATGTATTTCATTATCTCCTACCAGTACTTACCTGTTTCAGTAAATCAGCC
TGCGTGTACAAGACAAAATCATCACGTTAATATATACGGGCAGCTGAATC
TGCACATGTTCTTTTGCACAGAGTCTTGCAAGCAACAAACTGAGGGCTTG
GGCAAGAGCAAAGCAGCAAACAGCGCTGTCAGTGACGTCGACCAGCAGTG
GCGCTGCCTCCACGTTGACATACTATTAGGTGTATCAACAGCCGCTGCAT
GCTTGATATTCATGCCAATCTGGTTAAAGGGTCTCACTCACAGCTCACTC
TCCAAGTCGTGTCCATTGGTATTTGAGTTCCATATCCAATCCATGGAGTC
TGGAAGGGTGGACATCTCAAGGCAGCTCACTGCACCAGAAAACCACTGGC
AGCACCAGCCTGGTGCCGCATCAGGACCTAGTCAGCTTGGCGCATACTGC
ATCAGATCACTGCACCTCGCTCGCGGCGATGCGGCTCGTTCACATGAAAA
CGACAGCAACGAGGGCTGCGGCTGACAGTGTGCGGGTTTTGAGTGCTGCC
GCCCAAGGGCGCGCAGACCATCCTCGCGCTCAAGGGTCAGGATAAAGGCG
CGCCGCTGGCAGCAACATAATTGAGCCTGCGCTCCACCGCTTCATCGTCA
CAGGGCTCGCTGTAGACTCTCGGCGTTTGTGTGCTTCATTAGGGTCGACC
AATCATGGACAGCTATGCCAGCGGGCGCATGATGACGTTTTGCGAGCATC
ATCTCGGAGTTCTGGTAGCCGCTTCGTCTGCAACATCTGCGTGGGTACGC
ATGCGCATGGAAACAGGCATGTCCTTCTGCACTCAGCGCTGGCTCACTTC
AGCTGAGTCCGACGCGATGTGCAGGGTGGTGTGTATACTGAGTACAACTG
CGTATGAGGCCGCTTCCTTCTGGCGAAATCTTGTGTATCTCTAGAGCTTC
AGATCTGCACATATCTGCTGTACAGCATGCCCATTTATGCGGCAGCCATC
AAGCCCTTTGCACAGATCTTTTAAGTTTCGCTGCCGGAGCTGCTTGACAT
GCCATTGAGGAGTGAGATGATGCATGCACTGTATGGCCTGAGCGCGCCCT
GTCGGTTCCACAAAGCATCACCAGACGGTCCCTGATGTCCCTGCACATCG
CTCAATTATCCAGCGCGCATAGAATCAACAAAGCCAAAATGCTGCCGAAT
GCCCCCATGCTGATCAGCTCCAACAGCGTGCTGGACGCTGATTTTCTGCC
CTGGCGAATCCTGCTGCGACACCGATGCAAGTGTTCTGACCGGCACGGCA
GGCGACTGTCCGTCGTCCCATGGATCACCGCAGCAAAAGCTCAAAATTTT
AACAAACTTCAACGCTGAACTTCACGAAGTGAACCACCTACAAGGGACGA
GTGCAGTTGCACAGCAGCAGCGGGGGGCGGCCACCTTTGCGTACTGCAAT
ACCTGCGTGACAACGGCTGCCCGTGGAATGCGAGCATTTACTCTGCGGCG
TTAAGCGGCGGGCACGTAGAGGTGCTGCGCTACGCCAGAGAGCAGGGATG
CCCATGGTTGTCTGCAACATGCAGGTCGTGGCAGGCGGCGGAGGCGGGCA
GCCTAGCGGCATTGCAGTGGGCAATTGAGAATGGCTGTTGCTGGGATACA
TCCGTATGCGGGATAGCCGCAACAAAGGGGGATGTTGAGATGCTCGAGTG
GGCCGAGGCCCATGGCGCTCATTTCGATTCTGATCATGTCGCATTCAATG
CTGGAGGTGCGGGACAGTCGTCGGTTGCAATGTGGCTCCTCGCACGCAAG
GACGGCCCCATTCACCATGTGCTGGGGTCTGCAGCACAGGCGGGGCACGT
CGAGATCCTGCAGTGCGCTCAGTCAAACGGCATCTTTGCCAAGGAGACGC
TGCAGTACGCATACTGCGCCGCTTACGCCAATCACATCGAGGTGTTGGCG
TGGATGCTTGCTGCCGGTCACCTCGTCCCGAGACCATCACCCTGTGTGTC
ACCCAGTGGACACATAGAGTGGAACCCTGCTGCAGCCGCAGCGATGGGGG
GTCACGTGACCATACTGAAGTGGCTCAAGGCCCACGGATTCTTCAACACA
CACAGCGTACTCAAACGCGCAGCAAAAGGCCGACAGTTTGAGGTGCTTGA
GTGGGCTTACGCAAACGGATGTGAGTGGGACGAGTCCATATGTTGCTCAG
CAGCTGAGCAGGGGAACAAAGCAGTTGTAGACTGGGCGGCAGCGCGGGGG
TGCACGTGTGCCGCTCACAGCAGTGCTTGATGCTTACATGCAAGTCTTCA
CACGATCACCGGCTGCTTCTGCCGACATGTATCAAGGAATGTGAAGGTAT
ACTTTTGAGATGTGTTGTCGTCTGTGTCAGTGTGCCTGCCAGCGCAATTG
CTAGCACCTGCCCGTTGCGCTTTATAAATTTGCTGCTTGCTACCTGATGT
TACGTCTGCCTGGCATCACAGTGACTGGACCTCATGCCCGTGCCTCCTTT
GCTGACACACCACAGTGTGTCGCTTTGACCAACTGCTGCTTGTTTCATGA
AGTCGCTCCTTTGTGTGTACTTGCCATCTATACGGGTTGGAGCCATGAGT
CAGTTGTCAGATCATTAGTGAGCCACTGCATGTATGTGCCACTTGCATGT
GTCAGAGTTTCCTGTTCTCTGCCACTGACACGCTGACTTCTGGCGCAACC
TAGCAATGCTTCGTGCAGTTGATGTAAGGTCGTGCACGCTCAAAGTTGAC
TTACCAGGCACAACTTGCATTACATTGCCAACAGGCATGTGACCAGACAG
CGCAGCATCACTCTGCAAACCAGCACATGTTGAGTGCACCCCTTCTCATA
TGCATAGGGCCTCAACTGCCATTCCTTTAAGCACTTGGCACCAACAAAAC
TGTTGTAACCAGTCCCCAGCACAAATGCAGGTGCTCTGCCACAGTTTGCC
AGCAACGTTTTTGCTTATCGTTGATGATGTGTACGCCAGCCAATTACGCA
GTTCCTTCATCCTGTTTTAGCAAAGTGTTTGCCATCTGCATGTTTTGAAA
CTTTGAAGCATGCTTTGATTTGTGGTGATTGGTCGATCTCAACAGTGGCC
ATGCAAACAGCATGTTCAAATTTGCGGCAGAGGCTTGTGGCCACCCACAA
GGCAAGCATGCCCTCGACAACCTCATATTGCAATGCTGTGTGCACATGCA
GGAGAGCATGTTGCTGTCCATATAGCATTCCGTCAAAACAGCCTCCATCA
AGTAGTACGGTGACGCTCAAGACCGGCTGTCGGACGCGTTATTGATGGTG
TACTAACTTGGGCCTCGTGGTGGGTGCTGGTCAGCTCGAGCAATGGGGAT
TGCCGCAATTTGTTGCGTGTATAGACCTTGTTGCGCTGTGCAGTGTGTGT
TCACATCACAAAGCTCACACTTGCCTGTCTATGGTGGTGCACCATCATAT
GATAAGGCATCCCCCAATGAATTGTTGCCGGAGGTGCTCGACATAATCAC
TGTTCCCGTGATTTCATAATTGCTTACACTCCTGTTCCAGTAAGTCAGTC
CGTATATATGGAATAGCACTGCGTACATCCTTCACAGGGGGCATAAATCC
AGCTTGAGGTCAAGGCTTGCAAGCCAGATTTGAAGGATATCCGTGCAAGT
CTTAGAGCTGAGTAGCTGCAGCTGCGCCGCACAATGATGTCAAGCAGTAG
CGCGCAGCCTCCACATTGGCATTGGGCCTCTGCAATTGCTGGTTGCTTCT
GTGCCCATCCTGGTTAACGGGAGCGTCATTGAGAGCGAGGCTTCTGTTTA
CGAAAAGGCCATGTCCCATCAACTTGAATGGGGAATGGAAGAGAGGCAGT
TGGCTGCGTCAGTAAACCAGTGGCAGCACCAGCAGGGGCGCCCATCAAGT
TGTCGGCAACTGTTGTGCATACATGACTGACCGCTGCACCGCGCTTACGG
CGCTGCAGCTCATTCAGATGGAGAAGACGTCATTGAGGGCTGCAGCTGTG
CCTTGCTGTGCTGCGGCCCAAAAGCGCGCTGATCATTCCCACGTACAAGC
GCAAGAGCATTATTGTGTTGTAGGCAGCGGAAAAGTCGTTAGGCCCCTGC
TCGGCGGCGTCATCGTCAGGGGGCTTGCCGTGCACTCGTGCCTCGTGCGC
TTCCAAAGTTCATCACGCCCGATGATCACAAACAGCTGGCCAGGGCGCAT
GGCGACAATCACGAGCATCGTCTCTGAGGTCCGGTGGCCGCTTCCTCCAC
GACATCTGCCATGATGATGCGTGGCTACACATGCGCTTGGAAACAGGTAT
GTGTCTGTACTTAGCGCTGATTCACTTCAGCTGACCAAGGGGGACTGCAG
GTTGATGTGAGTATGACTGCCTATGGGGACGCTTCCCTCTGGCAGTATAT
TGTGTGACTCTACAGCTTTCAGGTCTGCACACGTCTGCTGAAAAGATTGC
TCGCTTTAAATGTCATTTATGTGGCAGTCATCAAACCCTTCAAGTTAAGC
ATCAAGCCCCTGCACCAAACGTTGACGCGTGAGATAATGCATGTACTGTA
CTGGCCTGAGCGCGCCTTGTCAGCTCATCACTGCATCTTAAGACGATCCC
TGATCTCCTTGCACATTGCGCAGTTACTCAGCGCCCATGGCCTGAATCAA
AGCCCAAATGCCGCACGCTGATCAGCTTGAACAGCGTGCTGGACGCTGAT
ATTTTTTCCGCCCTGGCAACTCCTGCTGCGGCACTGGTGCAAATGGTTTG
ACCGGCACGCAGCCGGCGACTGGCGGTCATCCGATGGATCAGCGTCAGCC
GGCAATCCCTCACAGAGACACTTATTCAACTTCAGCACCTGAACTTCCGT
TGAGGGTCTCCGAAAGCCTTCAGAGTAGAGAAGCGGTGCTAAACTTGAGT
GCCACCTACAGCACATCACGCCAGCAAGTGCACGAACGAGCATAGCGTGG
CCACCGATGGCATCCCAAAAAAGAAACAGGCTTGAGGAGAGGCAAGACAA
CACAGCCAGCTCTGTAGCCAGCTCTGTAGCCAGCTCTGTAGCAGCCACCA
CAGACAGCCTTGATGAAGCCTGCCTGCAGCAGATATTCTCGCTGGTTGGC
CCAGGCCACTATATGCTCCTGGCATGCTGCAAACGCTGGCAGCGCAGCTA
CTGGCTGTACGGAGAGTACAAGATGTTGAGCACGTCGTGGCCGAGCTGCC
GCTGCTTCAGTGGGCTGTTCATGCGAATGGTGGAGGCCATAGCATGAGTG
CTGCGACTTGCGCAGTTGCCGCCCGTAGCGGCCACCTGCCTTCGCTGCAG
TGGCTGCGCGAGCAGGGCTGCGAGTGGGACGAGCGCACGTGCAGCGAGGC
GGCAAGGAGGGAGATCTCGCCATGCTTCAGTGGGCTCGTGCTCACGATTG
CCCCTGGGACAGCACTACGGCAACGGAGCTAGCAAGGAGGGGAGACCTGA
CGATGCTGGAGTGCGCTGCAGAGGCTGGTCTTCAGATAGACTCTGAGGGG
ACAGGCGTTTCTGCGGCGGAACGAGGGCATCTCGAGGCGCTGCAGTGGCT
GCGTGCGCGCGGCTGTACTGTGAGCTGGGAGAGCGCTGAGGCAGCGGCGC
AGGGTGGCCACTTGCAGGTACTGCAATGGATCAGCTCGCAGATGCAAGTG
TTTTACATCATGATGTTAAGCATCTGTGCTGCAGCTGCAGAGGCAGGCCA
CTTGGCAGTAGTCAAATGGCTGCACTCGGCAGGCTGCCAGTGGGACCAGC
AAAGTTGCACCGCAGCAGCTAGGGGCGGTCACCTGCACGTACTGCAATAT
CTGCGTGACAACGAATGCCCCTGGGATGCGAGCATTTACTCTGCGGCGTT
AAGCGGCGGGCACATAGAGGTGCTGCGCTATGCCAGAGAGCAGGGCTGCC
CATGGTTGCCTACAACGGACGGGGCAGAGCTGGCAGCAAGGAACGGGAGC
CTAGAGGTACTGCAGTGGGCAATTGAGAATGGCTGTTGCTGGGATAGATC
CATATGTGAATTAGCCGCAAGAAAGGGCGATGTCGCGATGCTTGAGTGGG
CTGTAGCCAATGGCGCTCACTTTGACTCTTGCGGAGTAGCATTCGAAGCC
GGCAGGGCAGGACAGGTGTCGGTTGCAAAATGGCTTTTCGCGCGCAAGGA
GAGTTCCATCCACCTTCTGTCAGTGACTGCGGCACAGGAGGGGCACGTCA
AGCTCCTGCAGTGA

Coding sequence (CDS) from alignment at Contig_12:310617..318380+

>mRNA_3716 ID=mRNA_3716|Name=jgi.p|Trimin1|160152|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1251bp|location=Sequence derived from alignment at Contig_12:310617..318380+ (Tribonema minus UTEX_B_3156 )
CTGCAATATCTGCGTGACAACGGCTGCCCCTGGAATGCGAGCATTTACTC
TGCGGCGTTAAGCGGCGGGCACGTAAAGGTGCTGCACTACGCCAGAGAGC
AGGGCTGCCCATGGCTGCCCACAAAGGACGGGTCAGAGCAGGCAGCAAGG
AACGGGAGCCTAGAGGTACTGCAGTGGGCAATTCAGAATGGCTGCTGCTG
GGATGAATTTTGCAGTTGCACAGCAGCAGCGGGGGGCGGCCACCTTTGCG
TACTGCAATACCTGCGTGACAACGGCTGCCCGTGGAATGCGAGCATTTAC
TCTGCGGCGTTAAGCGGCGGGCACGTAGAGGTGCTGCGCTACGCCAGAGA
GCAGGGATGCCCATGGTTGTCTGCAACATGCAGGTCGTGGCAGGCGGCGG
AGGCGGGCAGCCTAGCGGCATTGCAGTGGGCAATTGAGAATGGCTGTTGC
TGGGATACATCCGTATGCGGGATAGCCGCAACAAAGGGGGATTTTGAGGT
GCTTGAGTGGGCTTACGCAAACGGATGTGAGTGGGACGAGTCCATATGTT
GCTCAGCAGCTGAGCAGGGGAACAAAGCAGTTGTAGACTGGGCGGCAGCG
CGGGGGTGCACCATGAGTGCTGCGACTTGCGCAGTTGCCGCCCGTAGCGG
CCACCTGCCTTCGCTGCAGTGGCTGCGCGAGCAGGGCTGCGAGTGGGACG
AGCGCACCATCTGTGCTGCAGCTGCAGAGGCAGGCCACTTGGCAGTAGTC
AAATGGCTGCACTCGGCAGGCTGCCAGTGGGACCAGCAAAGTTGCACCGC
AGCAGCTAGGGGCGGTCACCTGCACGTACTGCAATATCTGCGTGACAACG
AATGCCCCTGGGATGCGAGCATTTACTCTGCGGCGTTAAGCGGCGGGCAC
ATAGAGGTGCTGCGCTATGCCAGAGAGCAGGGCTGCCCATGGTTGCCTAC
AACGGACGGGGCAGAGCTGGCAGCAAGGAACGGGAGCCTAGAGGTACTGC
AGTGGGCAATTGAGAATGGCTGTTGCTGGGATAGATCCATATGTGAATTA
GCCGCAAGAAAGGGCGATGTCGCGATGCTTGAGTGGGCTGTAGCCAATGG
CGCTCACTTTGACTCTTGCGGAGTAGCATTCGAAGCCGGCAGGGCAGGAC
AGGTGTCGGTTGCAAAATGGCTTTTCGCGCGCAAGGAGAGTTCCATCCAC
CTTCTGTCAGTGACTGCGGCACAGGAGGGGCACGTCAAGCTCCTGCAGTG
A