mRNA_13227 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|174848
Unique Name	mRNA_13227
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|174848 vs. uniprot
Match: A0A836CMY9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY9_9STRA)

HSP 1 Score: 538 bits (1387), Expect = 1.420e-193
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1

Query:    1 MHTLAGAPREVLEYTTPLVLTHFRATEYWKALAEQGRLDVLQWGRDAHNFCPSADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANGQTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWLYERGCPRDDHASRLAAIERRVEVLQWLHAANAPMALDACDVAYEYDQVMNA 801
            MHTLAGAPREVLEYTTPLVLTHFRATEYWKALAEQGRLDVLQWGRDAHNFCPSADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANGQTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWLYERGCPRDDHASRLAAIERRVEVLQWLHAANAPMALDACDVAYEYDQVMNA
Sbjct:    1 MHTLAGAPREVLEYTTPLVLTHFRATEYWKALAEQGRLDVLQWGRDAHNFCPSADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANGQTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWLYERGCPRDDHASRLAAIERRVEVLQWLHAANAPMALDACDVAYEYDQVMNA 267

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BLAST of jgi.p|Trimin1|174848 vs. uniprot
Match: A0A835YIJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIJ4_9STRA)

HSP 1 Score: 336 bits (862), Expect = 4.990e-112
Identity = 173/263 (65.78%), Postives = 186/263 (70.72%), Query Frame = 1

Query:    1 MHTLAGAPREVLEYTTPLVLTHFRATEYWKALAEQGRLDVLQWGRDAHNFCPSADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANGQTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWLYERGCPRDDHASRLAAIERRVEVLQWLHAANAPMALDACDVAYEYDQ 789
            MHTLAGAP EVLEY TPLVLT F ATEYW ALAEQGRLDVLQWGRDAHNFCPSA+VAIAAA GG VHVLQWLHELMP+ST TTHSLLE+AA SGQIDAL+W++AGHDW GG          AG LAALV LR  G AWDH+AFE AAA+G+T+VM+ LV    PL V+DAYRRAA CGQR SLEWLE VFD  T WD NVFS AA SG    LRWL+  G                             MALD CDVAYEYDQ
Sbjct:    1 MHTLAGAPLEVLEYATPLVLTRFSATEYWNALAEQGRLDVLQWGRDAHNFCPSAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMALDVCDVAYEYDQ 263

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BLAST of jgi.p|Trimin1|174848 vs. uniprot
Match: A0A835YXM8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXM8_9STRA)

HSP 1 Score: 267 bits (682), Expect = 1.100e-84
Identity = 140/201 (69.65%), Postives = 154/201 (76.62%), Query Frame = 1

Query:   61 THFRATEYWKALAEQGRLDVLQWGRDAHNFCPSADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANGQTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWLYERGC 663
            +H+ +  YW+ LAE GRLDVLQW RDAHNFCP+ DVA AAACGGH HVLQWLHELMP ST T HSLL+ AA SG IDALDW+VA HDWHGGXXXXXXXXXXAG+LA LVRLRV GSAWDH+AFE+AAANGQTEVMEWL+ A APLRV+D                LE VFD  TPWD NVFS AA SG+   LRWL+  GC
Sbjct:    7 SHYLSATYWRTLAEHGRLDVLQWARDAHNFCPTVDVATAAACGGHTHVLQWLHELMPCSTQTAHSLLKIAASSGHIDALDWVVASHDWHGGXXXXXXXXXXAGKLAVLVRLRVHGSAWDHDAFEQAAANGQTEVMEWLICADAPLRVDDXXXXXXXXXXXXXXXXLEAVFDE-TPWDENVFSCAAGSGNVELLRWLHAGGC 206

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BLAST of jgi.p|Trimin1|174848 vs. uniprot
Match: A0A835YTI3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI3_9STRA)

HSP 1 Score: 248 bits (634), Expect = 6.720e-77
Identity = 140/228 (61.40%), Postives = 154/228 (67.54%), Query Frame = 1

Query:   94 LAEQGRLDVLQWGRDAHNFCPSADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANGQTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWLYERGCPRDDHASRLAAIERRVEVLQWLHAANAPMALDACDVAY 777
            LA++GRLDVLQWG  AH F PSA+VAI AA  G V +LQWLHE+MPWS  TTHSLL NAA  GQI ALDWL+A HDW GGXXXXXXXXXXAGEL AL  LR  GS+W+   F EAAANGQ  VMEWLV A APL V  AYR AA  GQRASLEWLE  F+  TPWD ++F+ AAESGD A L WL+                           AA AP+ALD CDVAY
Sbjct:    2 LADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAY 229

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BLAST of jgi.p|Trimin1|174848 vs. uniprot
Match: A0A835ZE15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE15_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.430e-72
Identity = 125/224 (55.80%), Postives = 143/224 (63.84%), Query Frame = 1

Query:    1 MHTLAGAPREVLEYTTPLVLT---HFRATEYWKALAEQGRLDVLQWGRDAHNFCPSADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANGQTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWLYERGC 663
            M  L  APREVLE+ TPL+L     +    YW+ LAE+GRL VLQWG  AH F PSA+ AIAA  GG V VL WLHEL PW+  TTH LL+NAA  GQ   ++WL     W  G           G+L AL  LR     WDHN F EAAANG+ EVMEW + ARAP+ V+DA+RRAA  G RASLEWLE  F   TPWDA+VF+ AAESGD   LRWL  RGC
Sbjct:  117 MRALTDAPREVLEHVTPLMLNLLPSYLGAMYWRTLAERGRLGVLQWGAAAHGFRPSAEAAIAAVRGGRVDVLHWLHELAPWTVQTTHCLLKNAATCGQTGVVEWLFGKRGWRDGAAAACAAAAATGQLPALQLLRAHYGRWDHNTFSEAAANGRLEVMEWAMRARAPVAVDDAHRRAARYGARASLEWLEARF-YGTPWDADVFACAAESGDVELLRWLCARGC 339

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BLAST of jgi.p|Trimin1|174848 vs. uniprot
Match: A0A835YS69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS69_9STRA)

HSP 1 Score: 223 bits (567), Expect = 7.530e-66
Identity = 121/169 (71.60%), Postives = 137/169 (81.07%), Query Frame = 1

Query:  157 SADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANGQTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWLYERGC 663
            S +VAIAAA GG VHVLQWLHEL+P+ST TTHSLL++AA SGQIDALDW++AGHDW GGXXXXXXXXXXAG  +ALV LR  GSAWDH+AFEEAAA+GQT++M++LV   APL V+DAYRRAA CGQR SLEWLE  FD  TPWD NVFS AA SG    LR L+   C
Sbjct:  131 SGEVAIAAARGGRVHVLQWLHELVPFSTQTTHSLLKSAASSGQIDALDWIIAGHDWRGGXXXXXXXXXXAGRFSALVHLRRHGSAWDHDAFEEAAAHGQTDMMDFLVSEDAPLSVDDAYRRAAQCGQRESLEWLEVAFDGETPWDENVFSCAAISGSVELLRCLHAERC 299

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BLAST of jgi.p|Trimin1|174848 vs. uniprot
Match: A0A836CCJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCJ3_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.240e-46
Identity = 98/164 (59.76%), Postives = 112/164 (68.29%), Query Frame = 1

Query:  178 AACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANGQTEVMEWLVIARAPL--RVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWLYERGC 663
            AA GGHV+VLQWLHEL PW+T TTH +L+NAA           +A HDW GG  XXXXXXXXAG+L AL  L   GS  DHNAF EAAA GQ E+MEW ++  APL  R+ DA RRA   GQRASLEWLE  F    PWD ++FS AA SGD   L+WL+ERGC
Sbjct:    1 AARGGHVNVLQWLHELAPWNTQTTHDVLKNAAXXXXXXXXXXXMATHDWRGGGAXXXXXXXXAGKLGALQHLLRCGSEVDHNAFSEAAACGQVELMEWALVEGAPLPLRLRDACRRATRRGQRASLEWLESTFF-AAPWDEDIFSCAAYSGDMTLLQWLHERGC 163

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BLAST of jgi.p|Trimin1|174848 vs. uniprot
Match: A0A835ZAT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT3_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 7.900e-17
Identity = 91/241 (37.76%), Postives = 102/241 (42.32%), Query Frame = 1

Query:   94 LAEQGRLDVLQWGRDAHNFCPSADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANG--QTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLED-------------VFDRVT---------PWDANVFSRAAESGDAAQLRWL-YERG-CPRDDHASRLAAIERRVEVLQWLHAA 738
            LA++GRLDVLQWG D H F PSA+VA+ AA  G V VLQWLHELMPWS                    D      D    XXXXXXXXXX          R     WD  A  +AA NG  Q E  EW      P+        A   G  A L+WL               V D  T         P D    + A E GDA  +RWL +E G    D HA   AA    +  L  LHAA
Sbjct:    2 LADRGRLDVLQWGTDTHGFRPSAEVAMTAARSGQVQVLQWLHELMPWSAXXXXXXXXXXXXXXXXXXEDVF---EDATXXXXXXXXXXXXXXXXXXXXXXREHECPWDERASRQAAVNGHVQDEAFEWAYGHGLPVAAKTEADMAE-RGDVARLKWLRARGHAFQSPPDMWAVADFGTMRWLQQHRFPCDERAMAAALERGDADAVRWLVHEVGHAACDHHACIAAASAGDLASLAPLHAA 238

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BLAST of jgi.p|Trimin1|174848 vs. uniprot
Match: H3GF11_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GF11_PHYRM)

HSP 1 Score: 58.9 bits (141), Expect = 3.100e-6
Identity = 38/104 (36.54%), Postives = 50/104 (48.08%), Query Frame = 1

Query:  424 AFEEAAANGQTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWLYERGCPRDD-HASRLAAIERRVEVLQWLH 732
            A + AAA G   +M+WL+  +    V  A  +AA  GQ   L WL+D  D V  W AN    A E      +RWL E   P     A  LAA    +E++QWL+
Sbjct:  116 AMQHAAARGDVAMMQWLLTFQPGGLVTRAVEQAARNGQLQVLRWLKDNHDHVF-WGANELRYAVEGNHLDVVRWLQEHTRPPTKLRAMNLAAANGNLELIQWLY 218

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|174848 vs. uniprot

BLAST of jgi.p|Trimin1|174848 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9


Match Name	E-value	Identity	Description
A0A836CMY9_9STRA	1.420e-193	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YIJ4_9STRA	4.990e-112	65.78	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YXM8_9STRA	1.100e-84	69.65	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YTI3_9STRA	6.720e-77	61.40	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZE15_9STRA	1.430e-72	55.80	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YS69_9STRA	7.530e-66	71.60	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCJ3_9STRA	2.240e-46	59.76	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZAT3_9STRA	7.900e-17	37.76	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
H3GF11_PHYRM	3.100e-6	36.54	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_118	contig	Contig_118:51652..52455 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|174848\|e_gw1.118.28.1
Description	Ankyrin repeats (3 copies)
COG category	S
Max annot lvl	4776\|Peronosporales
EggNOG OGs	COG0666@1\|root,KOG0504@2759\|Eukaryota,3QESJ@4776\|Peronosporales
Evalue	5.09e-07
Seed ortholog	164328.Phyra74268
Hectar predicted targeting category	other localisation
TranscriptId	175170
Track	FilteredModels1
ProteinId	174848

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|174848	gene_13227	Tribonema minus UTEX_B_3156	gene	Contig_118 51652..52455 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_13227_1	exon_13227_1	Tribonema minus UTEX_B_3156	exon	Contig_118 51652..52455 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_13227	CDS_13227	Tribonema minus UTEX_B_3156	CDS	Contig_118 51652..52455 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|174848	Trimin1\|174848\|e_gw1.118.28.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_118 51652..52455 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_118:51652..52455-
coding sequence from alignment at Contig_118:51652..52455-

spliced messenger RNA

>mRNA_13227 ID=mRNA_13227|Name=jgi.p|Trimin1|174848|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=804bp|location=Sequence derived from alignment at Contig_118:51652..52455- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCATACATTGGCAGGCGCTCCTCGGGAGGTGCTCGAATACACGACGCC
CCTGGTGCTCACCCACTTCCGCGCAACGGAGTACTGGAAGGCGCTTGCTG
AGCAGGGGCGCCTCGATGTACTGCAGTGGGGCAGAGACGCCCACAACTTC
TGCCCCTCCGCAGACGTGGCAATCGCGGCGGCGTGCGGCGGCCACGTGCA
CGTCCTGCAGTGGCTGCACGAGCTCATGCCCTGGAGCACCCATACCACCC
ACAGCCTCCTCGAGAACGCTGCATGCAGCGGTCAGATCGACGCGCTCGAC
TGGCTCGTTGCAGGGCATGACTGGCACGGCGGAGGCGCCGCTGCGTGCGC
CGCCGCCGCAGCCGCGGGCGAACTCGCCGCACTCGTGCGCCTGCGCGTGC
AAGGCAGCGCGTGGGACCACAACGCGTTCGAGGAAGCTGCAGCGAATGGG
CAGACGGAGGTGATGGAGTGGCTCGTCATCGCCCGCGCGCCGCTGAGAGT
TAACGACGCCTACCGGCGCGCAGCGTGGTGCGGGCAGCGCGCGTCCCTGG
AGTGGCTCGAAGACGTCTTTGATCGCGTGACGCCGTGGGACGCGAACGTC
TTCTCGCGCGCCGCGGAGAGCGGCGATGCGGCGCAGCTGCGCTGGCTGTA
CGAGCGGGGGTGTCCACGGGATGACCACGCAAGCCGCCTGGCTGCCATTG
AGCGCCGCGTCGAGGTGCTGCAGTGGCTACACGCCGCCAACGCGCCGATG
GCGCTTGATGCGTGCGATGTCGCATACGAGTACGATCAGGTGATGAACGC
TTGA

protein sequence of jgi.p|Trimin1|174848

>Trimin1|174848|e_gw1.118.28.1 ID=Trimin1|174848|e_gw1.118.28.1|Name=jgi.p|Trimin1|174848|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=268bp
MHTLAGAPREVLEYTTPLVLTHFRATEYWKALAEQGRLDVLQWGRDAHNF
CPSADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALD
WLVAGHDWHGGGAAACAAAAAAGELAALVRLRVQGSAWDHNAFEEAAANG
QTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANV
FSRAAESGDAAQLRWLYERGCPRDDHASRLAAIERRVEVLQWLHAANAPM
ALDACDVAYEYDQVMNA*

mRNA from alignment at Contig_118:51652..52455-

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_13227 ID=mRNA_13227|Name=jgi.p|Trimin1|174848|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=804bp|location=Sequence derived from alignment at Contig_118:51652..52455- (Tribonema minus UTEX_B_3156 )
ATGCATACATTGGCAGGCGCTCCTCGGGAGGTGCTCGAATACACGACGCC
CCTGGTGCTCACCCACTTCCGCGCAACGGAGTACTGGAAGGCGCTTGCTG
AGCAGGGGCGCCTCGATGTACTGCAGTGGGGCAGAGACGCCCACAACTTC
TGCCCCTCCGCAGACGTGGCAATCGCGGCGGCGTGCGGCGGCCACGTGCA
CGTCCTGCAGTGGCTGCACGAGCTCATGCCCTGGAGCACCCATACCACCC
ACAGCCTCCTCGAGAACGCTGCATGCAGCGGTCAGATCGACGCGCTCGAC
TGGCTCGTTGCAGGGCATGACTGGCACGGCGGAGGCGCCGCTGCGTGCGC
CGCCGCCGCAGCCGCGGGCGAACTCGCCGCACTCGTGCGCCTGCGCGTGC
AAGGCAGCGCGTGGGACCACAACGCGTTCGAGGAAGCTGCAGCGAATGGG
CAGACGGAGGTGATGGAGTGGCTCGTCATCGCCCGCGCGCCGCTGAGAGT
TAACGACGCCTACCGGCGCGCAGCGTGGTGCGGGCAGCGCGCGTCCCTGG
AGTGGCTCGAAGACGTCTTTGATCGCGTGACGCCGTGGGACGCGAACGTC
TTCTCGCGCGCCGCGGAGAGCGGCGATGCGGCGCAGCTGCGCTGGCTGTA
CGAGCGGGGGTGTCCACGGGATGACCACGCAAGCCGCCTGGCTGCCATTG
AGCGCCGCGTCGAGGTGCTGCAGTGGCTACACGCCGCCAACGCGCCGATG
GCGCTTGATGCGTGCGATGTCGCATACGAGTACGATCAGGTGATGAACGC
TTGA

Coding sequence (CDS) from alignment at Contig_118:51652..52455-

>mRNA_13227 ID=mRNA_13227|Name=jgi.p|Trimin1|174848|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=804bp|location=Sequence derived from alignment at Contig_118:51652..52455- (Tribonema minus UTEX_B_3156 )
ATGCATACATTGGCAGGCGCTCCTCGGGAGGTGCTCGAATACACGACGCC
CCTGGTGCTCACCCACTTCCGCGCAACGGAGTACTGGAAGGCGCTTGCTG
AGCAGGGGCGCCTCGATGTACTGCAGTGGGGCAGAGACGCCCACAACTTC
TGCCCCTCCGCAGACGTGGCAATCGCGGCGGCGTGCGGCGGCCACGTGCA
CGTCCTGCAGTGGCTGCACGAGCTCATGCCCTGGAGCACCCATACCACCC
ACAGCCTCCTCGAGAACGCTGCATGCAGCGGTCAGATCGACGCGCTCGAC
TGGCTCGTTGCAGGGCATGACTGGCACGGCGGAGGCGCCGCTGCGTGCGC
CGCCGCCGCAGCCGCGGGCGAACTCGCCGCACTCGTGCGCCTGCGCGTGC
AAGGCAGCGCGTGGGACCACAACGCGTTCGAGGAAGCTGCAGCGAATGGG
CAGACGGAGGTGATGGAGTGGCTCGTCATCGCCCGCGCGCCGCTGAGAGT
TAACGACGCCTACCGGCGCGCAGCGTGGTGCGGGCAGCGCGCGTCCCTGG
AGTGGCTCGAAGACGTCTTTGATCGCGTGACGCCGTGGGACGCGAACGTC
TTCTCGCGCGCCGCGGAGAGCGGCGATGCGGCGCAGCTGCGCTGGCTGTA
CGAGCGGGGGTGTCCACGGGATGACCACGCAAGCCGCCTGGCTGCCATTG
AGCGCCGCGTCGAGGTGCTGCAGTGGCTACACGCCGCCAACGCGCCGATG
GCGCTTGATGCGTGCGATGTCGCATACGAGTACGATCAGGTGATGAACGC
TTGA